Cow genome map
| Conread name: | Ss1.1-rthg01_d21.5 |
| Conread position: | 1-194 |
| Cow position: | chr10:9010064-9009871 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 70 |
| Conread position: | 3-285 |
| Cow position: | chr10:8996754-8996472 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 3-325 |
| Cow position: | chr10:21938986-21938666 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 201 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 3-329 |
| Cow position: | chr10:8996418-8996092 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-329 |
| Cow position: | chr10:8996671-8996344 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 3-329 |
| Cow position: | chr10:9010314-9009988 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-330 |
| Cow position: | chr10:9010482-9010155 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-333 |
| Cow position: | chr10:9031339-9031669 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-336 |
| Cow position: | chr10:9010398-9010065 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 222 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 296, 307 |
| Conread position: | 8-252 |
| Cow position: | chr10:8996245-8996001 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-329 |
| Cow position: | chr10:8996329-8996008 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-329 |
| Cow position: | chr10:8996497-8996176 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 63 |
| Conread position: | 8-329 |
| Cow position: | chr10:8996833-8996512 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 217 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-287 |
| Cow position: | chr10:21939063-21938786 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-288 |
| Cow position: | chr10:9010139-9009861 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-329 |
| Cow position: | chr10:8996579-8996260 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 291 |
| Conread position: | 10-329 |
| Cow position: | chr10:9010223-9009904 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-329 |
| Cow position: | chr10:9010559-9010240 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 214 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 118, 123 |
| Conread position: | 10-329 |
| Cow position: | chr10:9031262-9031581 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-284 |
| Cow position: | chr10:21939222-21938957 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 40-329 |
| Cow position: | chr10:8996886-8996596 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 8, 36 |
| Conread position: | 41-285 |
| Cow position: | chr10:21939117-21938872 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 31 |
| Conread position: | 62-329 |
| Cow position: | chr10:9010589-9010324 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 151, 26 |
| Conread position: | 64-329 |
| Cow position: | chr10:9031232-9031497 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 134, 127 |
| Conread position: | 93-329 |
| Cow position: | chr10:9031177-9031413 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 114-329 |
| Cow position: | chr10:8996895-8996680 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.