Cow genome map


           Conread name:
           Ss1.1-rthg01_d21.5
        

               Conread position:
               3-235
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               4-324
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               62, 67
               

               Conread position:
               9-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               10-168
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               79, 152
               

               Conread position:
               10-284
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               10-319
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 293
               

               Conread position:
               10-323
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               121, 111
               

               Conread position:
               10-326
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 31
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               212
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               56, 61
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-345
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               15-329
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               16-274
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               232, 0
               

               Conread position:
               16-329
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               286, 282
               

               Conread position:
               16-329
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               286, 282
               

               Conread position:
               16-329
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 282
               

               Conread position:
               16-329
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 282
               

               Conread position:
               18-239
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               113, 102
               

               Conread position:
               18-329
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               19-323
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               160, 154
               

               Conread position:
               19-323
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               160, 154
               

               Conread position:
               19-329
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               31-285
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               148, 142
               

               Conread position:
               31-285
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               148, 142
               

               Conread position:
               31-331
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               273, 279
               

               Conread position:
               32-321
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               163, 14
               

               Conread position:
               38-327
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               210, 204
               

               Conread position:
               39-329
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               209, 203
               

               Conread position:
               48-324
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               167, 148
               

               Conread position:
               57-345
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               73, 84
               

               Conread position:
               68-327
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               82-329
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               131, 121
               

               Conread position:
               89-320
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               104, 0
               
Show alignments to all cow chromosomes.