Cow genome map


           Conread name:
           Ss1.1-rthg01_d21.5
        

               Conread position:
               1-329
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               297, 308
               

               Conread position:
               3-273
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-323
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 200
               

               Conread position:
               3-324
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-325
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               133, 139
               

               Conread position:
               3-326
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               209, 200
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               191, 206
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               209, 193
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               119, 106
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-329
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-329
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 28
               

               Conread position:
               8-326
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               204, 195
               

               Conread position:
               8-329
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               224
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               35, 26
               

               Conread position:
               8-329
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 303
               

               Conread position:
               8-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 194
               

               Conread position:
               10-262
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-284
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 60
               

               Conread position:
               10-319
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-328
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               203, 196
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               118, 108
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 173
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 133
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 301
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               201, 194
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               186, 201
               

               Conread position:
               14-329
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-329
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-285
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               48, 53
               

               Conread position:
               16-329
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               16-345
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 0
               

               Conread position:
               19-329
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               19-329
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-329
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               41-329
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               154, 168
               

               Conread position:
               49-274
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               57-324
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               68-351
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               263, 0
               

               Conread position:
               78-329
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               92-329
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               116, 104
               
Show alignments to all cow chromosomes.