Cow genome map

Conread name: Ss1.1-rthg01_d21.5

Conread position: 2-284
Cow position:
Alignm length: 284
Alignm identity: 193
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 2-329
Cow position:
Alignm length: 331
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 114

Conread position: 3-270
Cow position:
Alignm length: 270
Alignm identity: 175
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 130, 121

Conread position: 3-272
Cow position:
Alignm length: 270
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-277
Cow position:
Alignm length: 275
Alignm identity: 188
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 3-278
Cow position:
Alignm length: 278
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 68

Conread position: 3-316
Cow position:
Alignm length: 315
Alignm identity: 208
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 45, 36

Conread position: 3-323
Cow position:
Alignm length: 322
Alignm identity: 219
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 269, 255

Conread position: 3-323
Cow position:
Alignm length: 323
Alignm identity: 215
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 277, 288

Conread position: 3-324
Cow position:
Alignm length: 324
Alignm identity: 209
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 292, 286

Conread position: 3-324
Cow position:
Alignm length: 325
Alignm identity: 220
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 45, 32

Conread position: 3-326
Cow position:
Alignm length: 325
Alignm identity: 219
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 37, 31

Conread position: 3-326
Cow position:
Alignm length: 326
Alignm identity: 223
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 130, 121

Conread position: 3-326
Cow position:
Alignm length: 325
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 290

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 290

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 221
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 190, 197

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 125, 119

Conread position: 3-329
Cow position:
Alignm length: 330
Alignm identity: 220
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 32

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 207
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 209, 188

Conread position: 3-331
Cow position:
Alignm length: 329
Alignm identity: 220
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 4-329
Cow position:
Alignm length: 329
Alignm identity: 222
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 60, 67

Conread position: 4-329
Cow position:
Alignm length: 327
Alignm identity: 216
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 139, 134

Conread position: 6-219
Cow position:
Alignm length: 215
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 65

Conread position: 6-329
Cow position:
Alignm length: 324
Alignm identity: 215
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 8-256
Cow position:
Alignm length: 249
Alignm identity: 172
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 8-269
Cow position:
Alignm length: 264
Alignm identity: 175
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 180, 174

Conread position: 8-286
Cow position:
Alignm length: 279
Alignm identity: 193
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 8-319
Cow position:
Alignm length: 312
Alignm identity: 203
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 8-323
Cow position:
Alignm length: 317
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 171, 167

Conread position: 8-329
Cow position:
Alignm length: 323
Alignm identity: 220
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 128, 134

Conread position: 8-329
Cow position:
Alignm length: 324
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 41

Conread position: 8-329
Cow position:
Alignm length: 322
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 9-246
Cow position:
Alignm length: 238
Alignm identity: 159
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 10-283
Cow position:
Alignm length: 274
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 10-287
Cow position:
Alignm length: 278
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 10-288
Cow position:
Alignm length: 280
Alignm identity: 186
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 203, 45

Conread position: 10-288
Cow position:
Alignm length: 279
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-291
Cow position:
Alignm length: 283
Alignm identity: 191
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 216, 186

Conread position: 10-311
Cow position:
Alignm length: 306
Alignm identity: 192
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 150

Conread position: 10-323
Cow position:
Alignm length: 314
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 213
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 216
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 300

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 216
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 288, 300

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 323
Alignm identity: 216
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 29

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 218
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 63, 0

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 202, 193

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 322
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 61

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 215
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 322
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 25

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 216
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 165, 178

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 322
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 184, 190

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 210
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 54, 60

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 203, 193

Conread position: 10-345
Cow position:
Alignm length: 336
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 317, 0

Conread position: 12-284
Cow position:
Alignm length: 273
Alignm identity: 181
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 188, 0

Conread position: 12-329
Cow position:
Alignm length: 319
Alignm identity: 213
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 286, 20

Conread position: 13-288
Cow position:
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 175, 161

Conread position: 15-329
Cow position:
Alignm length: 316
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 114, 109

Conread position: 16-329
Cow position:
Alignm length: 315
Alignm identity: 206
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 41, 18

Conread position: 16-329
Cow position:
Alignm length: 314
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 16-329
Cow position:
Alignm length: 315
Alignm identity: 207
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 271, 285

Conread position: 16-329
Cow position:
Alignm length: 317
Alignm identity: 205
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 189, 180

Conread position: 18-329
Cow position:
Alignm length: 314
Alignm identity: 214
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 269, 293

Conread position: 19-325
Cow position:
Alignm length: 308
Alignm identity: 204
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 174, 181

Conread position: 19-325
Cow position:
Alignm length: 308
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 178

Conread position: 19-329
Cow position:
Alignm length: 312
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 52

Conread position: 38-323
Cow position:
Alignm length: 286
Alignm identity: 182
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 210, 0

Conread position: 46-329
Cow position:
Alignm length: 284
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 47-329
Cow position:
Alignm length: 283
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 49-330
Cow position:
Alignm length: 283
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 70, 27

Conread position: 58-329
Cow position:
Alignm length: 272
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 84, 0

Conread position: 58-329
Cow position:
Alignm length: 273
Alignm identity: 191
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 237, 231

Conread position: 63-329
Cow position:
Alignm length: 267
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 64-330
Cow position:
Alignm length: 268
Alignm identity: 177
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 245, 240

Conread position: 71-329
Cow position:
Alignm length: 260
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 125, 141

Conread position: 79-326
Cow position:
Alignm length: 248
Alignm identity: 167
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 92-329
Cow position:
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 41

Conread position: 100-329
Cow position:
Alignm length: 230
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 103-328
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 109, 104

Show alignments to all cow chromosomes.