Cow genome map

Conread name: Ss1.1-rthg01_d21.5

Conread position: 2-284
Cow position: chr19:20635624-20635341 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 193
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 5, 0

Conread position: 2-329
Cow position: chr19:14959233-14958911 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 232
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 114

Conread position: 3-270
Cow position: chr19:14959558-14959292 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 175
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 130, 121

Conread position: 3-272
Cow position: chr19:23650069-23650338 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 171
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 3-277
Cow position: chr19:23614115-23614389 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 3-278
Cow position: chr19:20678466-20678738 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 68

Conread position: 3-316
Cow position: chr19:43570045-43569732 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 208
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 45, 36

Conread position: 3-323
Cow position: chr19:14960130-14959810 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 269, 255

Conread position: 3-323
Cow position: chr19:23597376-23597696 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 277, 288

Conread position: 3-324
Cow position: chr19:14948372-14948051 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 209
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 292, 286

Conread position: 3-324
Cow position: chr19:23614787-23615108 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 45, 32

Conread position: 3-326
Cow position: chr19:14940083-14940406 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 219
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 37, 31

Conread position: 3-326
Cow position: chr19:23613527-23613850 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 130, 121

Conread position: 3-326
Cow position: chr19:23613947-23614270 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 290

Conread position: 3-329
Cow position: chr19:14940167-14940493 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 290

Conread position: 3-329
Cow position: chr19:14960380-14960056 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 221
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 190, 197

Conread position: 3-329
Cow position: chr19:20635370-20635044 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 125, 119

Conread position: 3-329
Cow position: chr19:20678130-20678456 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 220
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 54, 32

Conread position: 3-329
Cow position: chr19:23597040-23597366 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 207
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position: chr19:23613359-23613685 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 205
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position: chr19:23613695-23614021 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position: chr19:23614031-23614357 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position: chr19:23614619-23614945 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 219
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 209, 188

Conread position: 3-331
Cow position: chr19:23597208-23597536 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 220
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 4-329
Cow position: chr19:23614704-23615029 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 222
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 60, 67

Conread position: 4-329
Cow position: chr19:23650154-23650479 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 216
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 139, 134

Conread position: 6-219
Cow position: chr19:14940842-14941055 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 65

Conread position: 6-329
Cow position: chr19:23613614-23613937 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 215
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 8-256
Cow position: chr19:23597465-23597713 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 172
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 8-269
Cow position: chr19:20635281-20635020 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 180, 174

Conread position: 8-286
Cow position: chr19:20677799-20678077 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 193
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 8-319
Cow position: chr19:43570366-43570065 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 203
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 8-323
Cow position: chr19:23649570-23649885 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 218
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 171, 167

Conread position: 8-329
Cow position: chr19:20635533-20635212 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 220
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 128, 134

Conread position: 8-329
Cow position: chr19:23597129-23597450 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 212
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 41

Conread position: 8-329
Cow position: chr19:23649318-23649639 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 9-246
Cow position: chr19:14959063-14958826 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 10-283
Cow position: chr19:20677717-20677990 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 10-287
Cow position: chr19:14940594-14940871 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 10-288
Cow position: chr19:14948448-14948171 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 186
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 203, 45

Conread position: 10-288
Cow position: chr19:20678305-20678583 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-291
Cow position: chr19:20678389-20678669 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 191
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 216, 186

Conread position: 10-311
Cow position: chr19:14915979-14916280 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 192
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 26, 150

Conread position: 10-323
Cow position: chr19:23649824-23650137 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position: chr19:14940006-14940325 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 213
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position: chr19:14940258-14940577 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position: chr19:14940342-14940661 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 300

Conread position: 10-329
Cow position: chr19:14940426-14940745 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 288, 300

Conread position: 10-329
Cow position: chr19:14940510-14940829 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position: chr19:14940678-14940997 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position: chr19:14959635-14959316 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 38, 29

Conread position: 10-329
Cow position: chr19:14960205-14959888 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 63, 0

Conread position: 10-329
Cow position: chr19:20635447-20635128 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 202, 193

Conread position: 10-329
Cow position: chr19:20677885-20678204 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position: chr19:20678221-20678540 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position: chr19:23613786-23614105 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 61

Conread position: 10-329
Cow position: chr19:23613870-23614189 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 215
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position: chr19:23614206-23614525 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 25

Conread position: 10-329
Cow position: chr19:23614290-23614609 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 165, 178

Conread position: 10-329
Cow position: chr19:23614542-23614861 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position: chr19:23649404-23649723 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 217
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 184, 190

Conread position: 10-329
Cow position: chr19:23649740-23650059 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 210
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 54, 60

Conread position: 10-329
Cow position: chr19:23649908-23650227 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 210
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position: chr19:43570206-43569887 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 218
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 203, 193

Conread position: 10-345
Cow position: chr19:23613450-23613782 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 228
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 317, 0

Conread position: 12-284
Cow position: chr19:14959306-14959040 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 181
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 188, 0

Conread position: 12-329
Cow position: chr19:14959138-14958827 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 286, 20

Conread position: 13-288
Cow position: chr19:14960036-14959763 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 175, 161

Conread position: 15-329
Cow position: chr19:43570117-43569803 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 114, 109

Conread position: 16-329
Cow position: chr19:20677639-20677952 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 206
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 41, 18

Conread position: 16-329
Cow position: chr19:20678059-20678372 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 201
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 16-329
Cow position: chr19:23597305-23597618 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 207
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 271, 285

Conread position: 16-329
Cow position: chr19:23649662-23649975 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 205
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 189, 180

Conread position: 18-329
Cow position: chr19:23650000-23650311 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 269, 293

Conread position: 19-325
Cow position: chr19:14960448-14960144 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 204
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 174, 181

Conread position: 19-325
Cow position: chr19:23614467-23614773 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 178

Conread position: 19-329
Cow position: chr19:23649497-23649807 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 206
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 48, 52

Conread position: 38-323
Cow position: chr19:23596826-23597108 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 182
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 210, 0

Conread position: 46-329
Cow position: chr19:23614410-23614693 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 47-329
Cow position: chr19:14939960-14940241 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 49-330
Cow position: chr19:14959678-14959399 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 70, 27

Conread position: 58-329
Cow position: chr19:14948484-14948214 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 84, 0

Conread position: 58-329
Cow position: chr19:43570242-43569971 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 237, 231

Conread position: 63-329
Cow position: chr19:20677603-20677868 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 64-330
Cow position: chr19:20635645-20635379 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 245, 240

Conread position: 71-329
Cow position: chr19:23649297-23649555 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 165
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 125, 141

Conread position: 79-326
Cow position: chr19:23613351-23613598 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 92-329
Cow position: chr19:20635701-20635464 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 41

Conread position: 100-329
Cow position: chr19:23613288-23613517 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 103-328
Cow position: chr19:14960448-14960223 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 109, 104

Show alignments to all cow chromosomes.