Cow genome map

Conread name: Ss1.1-rthg01_d21.5

Conread position: 3-288
Cow position:
Alignm length: 287
Alignm identity: 192
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 40, 31

Conread position: 3-308
Cow position:
Alignm length: 307
Alignm identity: 212
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 301, 167

Conread position: 3-312
Cow position:
Alignm length: 311
Alignm identity: 193
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 61, 68

Conread position: 3-328
Cow position:
Alignm length: 327
Alignm identity: 201
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 314, 320

Conread position: 3-329
Cow position:
Alignm length: 330
Alignm identity: 208
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 135, 140

Conread position: 3-329
Cow position:
Alignm length: 329
Alignm identity: 205
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 234, 247

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 110

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 206
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 70, 78

Conread position: 4-279
Cow position:
Alignm length: 277
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 212, 30

Conread position: 7-329
Cow position:
Alignm length: 323
Alignm identity: 218
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 8-284
Cow position:
Alignm length: 278
Alignm identity: 179
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 226, 231

Conread position: 8-285
Cow position:
Alignm length: 279
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 141, 147

Conread position: 8-329
Cow position:
Alignm length: 322
Alignm identity: 206
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 8-331
Cow position:
Alignm length: 325
Alignm identity: 203
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 47, 27

Conread position: 10-253
Cow position:
Alignm length: 244
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 116, 0

Conread position: 10-288
Cow position:
Alignm length: 282
Alignm identity: 186
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 38

Conread position: 10-318
Cow position:
Alignm length: 311
Alignm identity: 206
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 178, 172

Conread position: 10-323
Cow position:
Alignm length: 314
Alignm identity: 202
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 244, 0

Conread position: 10-323
Cow position:
Alignm length: 314
Alignm identity: 214
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 162, 0

Conread position: 10-323
Cow position:
Alignm length: 315
Alignm identity: 208
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 202, 186

Conread position: 10-329
Cow position:
Alignm length: 322
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 26

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 204
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 206, 165

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 59

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 220
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 199, 78

Conread position: 10-329
Cow position:
Alignm length: 323
Alignm identity: 214
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 38, 24

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 208
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 184, 190

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 215
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 133, 121

Conread position: 11-319
Cow position:
Alignm length: 311
Alignm identity: 201
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 37, 27

Conread position: 12-328
Cow position:
Alignm length: 320
Alignm identity: 224
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 18, 35

Conread position: 14-329
Cow position:
Alignm length: 317
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 195

Conread position: 15-323
Cow position:
Alignm length: 311
Alignm identity: 203
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 190, 179

Conread position: 15-329
Cow position:
Alignm length: 315
Alignm identity: 216
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 14, 0

Conread position: 16-329
Cow position:
Alignm length: 316
Alignm identity: 215
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 100, 118

Conread position: 19-316
Cow position:
Alignm length: 299
Alignm identity: 185
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 52

Conread position: 19-331
Cow position:
Alignm length: 314
Alignm identity: 194
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 297, 211

Conread position: 25-323
Cow position:
Alignm length: 300
Alignm identity: 204
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 96, 65

Conread position: 28-285
Cow position:
Alignm length: 260
Alignm identity: 177
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 101, 92

Conread position: 38-329
Cow position:
Alignm length: 293
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 238, 249

Conread position: 48-329
Cow position:
Alignm length: 283
Alignm identity: 179
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 250, 262

Conread position: 68-329
Cow position:
Alignm length: 266
Alignm identity: 180
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 44, 52

Conread position: 70-329
Cow position:
Alignm length: 260
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 90-323
Cow position:
Alignm length: 235
Alignm identity: 156
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 122, 109

Conread position: 103-329
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 109, 94

Show alignments to all cow chromosomes.