Cow genome map

Conread name: Ss1.1-rthg01_d21.5

Conread position: 1-253
Cow position:
Alignm length: 254
Alignm identity: 161
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 132, 120

Conread position: 1-329
Cow position:
Alignm length: 329
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 2-285
Cow position:
Alignm length: 285
Alignm identity: 190
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 65, 69

Conread position: 2-329
Cow position:
Alignm length: 329
Alignm identity: 225
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 294, 41

Conread position: 2-346
Cow position:
Alignm length: 347
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 194

Conread position: 3-168
Cow position:
Alignm length: 166
Alignm identity: 117
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 153, 0

Conread position: 3-270
Cow position:
Alignm length: 269
Alignm identity: 188
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 195, 188

Conread position: 3-284
Cow position:
Alignm length: 282
Alignm identity: 185
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 3-317
Cow position:
Alignm length: 317
Alignm identity: 213
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 32, 38

Conread position: 3-318
Cow position:
Alignm length: 319
Alignm identity: 199
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 87

Conread position: 3-319
Cow position:
Alignm length: 317
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-323
Cow position:
Alignm length: 321
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-328
Cow position:
Alignm length: 327
Alignm identity: 214
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 238, 249

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 307

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 329
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 68

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 213
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 61, 75

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 64, 68

Conread position: 3-339
Cow position:
Alignm length: 338
Alignm identity: 218
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 303, 278

Conread position: 4-285
Cow position:
Alignm length: 282
Alignm identity: 191
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 4-329
Cow position:
Alignm length: 326
Alignm identity: 207
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 27, 0

Conread position: 6-283
Cow position:
Alignm length: 280
Alignm identity: 179
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 65

Conread position: 6-319
Cow position:
Alignm length: 317
Alignm identity: 211
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 139, 111

Conread position: 6-319
Cow position:
Alignm length: 319
Alignm identity: 217
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 42, 28

Conread position: 6-329
Cow position:
Alignm length: 325
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 197

Conread position: 6-329
Cow position:
Alignm length: 324
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-329
Cow position:
Alignm length: 326
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 29

Conread position: 6-329
Cow position:
Alignm length: 325
Alignm identity: 214
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 143, 161

Conread position: 6-329
Cow position:
Alignm length: 326
Alignm identity: 206
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 237, 252

Conread position: 7-319
Cow position:
Alignm length: 313
Alignm identity: 214
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 7-319
Cow position:
Alignm length: 315
Alignm identity: 197
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 64

Conread position: 7-326
Cow position:
Alignm length: 320
Alignm identity: 216
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 7-329
Cow position:
Alignm length: 324
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 286

Conread position: 8-240
Cow position:
Alignm length: 233
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 8-319
Cow position:
Alignm length: 312
Alignm identity: 210
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 8-328
Cow position:
Alignm length: 323
Alignm identity: 208
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 293, 273

Conread position: 8-329
Cow position:
Alignm length: 322
Alignm identity: 209
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 8-329
Cow position:
Alignm length: 324
Alignm identity: 221
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 194, 207

Conread position: 9-329
Cow position:
Alignm length: 323
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 62

Conread position: 9-329
Cow position:
Alignm length: 321
Alignm identity: 210
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 10-240
Cow position:
Alignm length: 232
Alignm identity: 157
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 119, 123

Conread position: 10-264
Cow position:
Alignm length: 255
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 10-284
Cow position:
Alignm length: 276
Alignm identity: 186
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 57, 61

Conread position: 10-294
Cow position:
Alignm length: 287
Alignm identity: 198
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 111, 121

Conread position: 10-306
Cow position:
Alignm length: 298
Alignm identity: 200
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 280, 0

Conread position: 10-317
Cow position:
Alignm length: 311
Alignm identity: 207
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 254, 238

Conread position: 10-319
Cow position:
Alignm length: 310
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-319
Cow position:
Alignm length: 312
Alignm identity: 204
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 139, 149

Conread position: 10-323
Cow position:
Alignm length: 315
Alignm identity: 200
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 79, 65

Conread position: 10-325
Cow position:
Alignm length: 318
Alignm identity: 216
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 205, 189

Conread position: 10-326
Cow position:
Alignm length: 319
Alignm identity: 208
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 202, 186

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 219
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 202, 185

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 301

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 288, 297

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 215
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 14-329
Cow position:
Alignm length: 318
Alignm identity: 216
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 124, 129

Conread position: 38-326
Cow position:
Alignm length: 289
Alignm identity: 198
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 72-288
Cow position:
Alignm length: 217
Alignm identity: 152
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 74-283
Cow position:
Alignm length: 211
Alignm identity: 140
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 120, 126

Conread position: 74-319
Cow position:
Alignm length: 248
Alignm identity: 167
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 35

Conread position: 79-329
Cow position:
Alignm length: 251
Alignm identity: 162
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 94-329
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 28, 15

Conread position: 157-329
Cow position:
Alignm length: 173
Alignm identity: 118
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.