Cow genome map


           Conread name:
           Ss1.1-rthg01_d21.5
        

               Conread position:
               2-259
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               41, 33
               

               Conread position:
               2-323
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 309
               

               Conread position:
               3-280
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               176, 163
               

               Conread position:
               3-325
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               61, 68
               

               Conread position:
               3-326
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               45, 31
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               209, 204
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               276, 262
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               209, 188
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-273
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               128, 133
               

               Conread position:
               10-283
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-318
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 24
               

               Conread position:
               10-318
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-326
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               118, 111
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               288, 299
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               57, 61
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 24
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 189
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               14-329
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               19-329
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               19-329
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               287, 291
               

               Conread position:
               25-319
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               42, 46
               

               Conread position:
               80-329
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               132, 116
               

               Conread position:
               100-309
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               113, 103
               
Show alignments to all cow chromosomes.