Cow genome map

Conread name: Ss1.1-rthg01_d21.5

Conread position: 2-326
Cow position:
Alignm length: 332
Alignm identity: 210
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 43, 53

Conread position: 3-207
Cow position:
Alignm length: 206
Alignm identity: 142
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 140, 135

Conread position: 3-241
Cow position:
Alignm length: 239
Alignm identity: 174
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 3-252
Cow position:
Alignm length: 250
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-253
Cow position:
Alignm length: 251
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-287
Cow position:
Alignm length: 285
Alignm identity: 196
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 37, 0

Conread position: 3-321
Cow position:
Alignm length: 320
Alignm identity: 201
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 214, 176

Conread position: 3-325
Cow position:
Alignm length: 326
Alignm identity: 206
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 138

Conread position: 3-326
Cow position:
Alignm length: 325
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 279

Conread position: 3-327
Cow position:
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-328
Cow position:
Alignm length: 326
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 307

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 193

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 38

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 181

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 0

Conread position: 3-329
Cow position:
Alignm length: 329
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 56

Conread position: 3-351
Cow position:
Alignm length: 352
Alignm identity: 222
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 118, 130

Conread position: 4-326
Cow position:
Alignm length: 324
Alignm identity: 220
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 300, 306

Conread position: 6-329
Cow position:
Alignm length: 324
Alignm identity: 206
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 7-263
Cow position:
Alignm length: 257
Alignm identity: 162
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 228, 0

Conread position: 8-302
Cow position:
Alignm length: 297
Alignm identity: 195
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 115

Conread position: 8-302
Cow position:
Alignm length: 295
Alignm identity: 197
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 8-323
Cow position:
Alignm length: 317
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 85

Conread position: 8-329
Cow position:
Alignm length: 323
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 12

Conread position: 8-329
Cow position:
Alignm length: 324
Alignm identity: 205
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 63

Conread position: 8-330
Cow position:
Alignm length: 324
Alignm identity: 204
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 16, 27

Conread position: 10-264
Cow position:
Alignm length: 255
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-279
Cow position:
Alignm length: 270
Alignm identity: 177
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 78, 0

Conread position: 10-285
Cow position:
Alignm length: 283
Alignm identity: 192
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 40, 24

Conread position: 10-323
Cow position:
Alignm length: 314
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 87

Conread position: 10-329
Cow position:
Alignm length: 328
Alignm identity: 227
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 136, 24

Conread position: 10-329
Cow position:
Alignm length: 322
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 25

Conread position: 10-329
Cow position:
Alignm length: 322
Alignm identity: 207
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 14, 31

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 54, 61

Conread position: 10-331
Cow position:
Alignm length: 325
Alignm identity: 224
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 199, 30

Conread position: 12-329
Cow position:
Alignm length: 318
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 0

Conread position: 13-329
Cow position:
Alignm length: 317
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 14-324
Cow position:
Alignm length: 312
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 55

Conread position: 14-329
Cow position:
Alignm length: 317
Alignm identity: 204
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 32

Conread position: 14-329
Cow position:
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 0

Conread position: 15-182
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 15-329
Cow position:
Alignm length: 315
Alignm identity: 214
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 47, 0

Conread position: 15-329
Cow position:
Alignm length: 315
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 27-329
Cow position:
Alignm length: 303
Alignm identity: 213
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 88, 0

Conread position: 34-329
Cow position:
Alignm length: 297
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 0

Conread position: 45-329
Cow position:
Alignm length: 287
Alignm identity: 205
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 5, 24

Conread position: 47-326
Cow position:
Alignm length: 283
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 50, 67

Conread position: 56-329
Cow position:
Alignm length: 277
Alignm identity: 178
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 238, 64

Conread position: 58-329
Cow position:
Alignm length: 272
Alignm identity: 186
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 70-279
Cow position:
Alignm length: 210
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 75-284
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 9, 16

Conread position: 88-329
Cow position:
Alignm length: 243
Alignm identity: 156
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 192, 213

Conread position: 401-565
Cow position:
Alignm length: 170
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 5

Show alignments to all cow chromosomes.