Cow genome map


           Conread name:
           Ss1.1-rthg01_d21.5
        

               Conread position:
               3-221
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               99, 119
               

               Conread position:
               3-281
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               202, 188
               

               Conread position:
               3-324
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               40, 46
               

               Conread position:
               3-326
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               295, 307
               

               Conread position:
               3-326
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               8, 284
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               40, 48
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               40, 46
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               8, 38
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               124, 130
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               218
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               284, 291
               

               Conread position:
               4-288
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               8-326
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               204, 188
               

               Conread position:
               10-240
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               32, 38
               

               Conread position:
               10-285
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-319
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               47, 36
               

               Conread position:
               10-326
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-326
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               280, 60
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               37, 24
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               271, 284
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               279, 283
               

               Conread position:
               13-325
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               15-323
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               33, 19
               

               Conread position:
               15-325
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               280, 82
               

               Conread position:
               22-329
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               213
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               64, 11
               

               Conread position:
               40-329
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               84, 93
               

               Conread position:
               56-284
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               128, 141
               

               Conread position:
               81-329
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               51, 40
               
Show alignments to all cow chromosomes.