Cow genome map
| Conread name: | Ss1.1-rthg01_d21.5 |
| Conread position: | 3-285 |
| Cow position: | chr6:49341168-49341449 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 272, 0 |
| Conread position: | 3-328 |
| Cow position: | chr6:49341084-49341409 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-329 |
| Cow position: | chr6:49340412-49340738 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-329 |
| Cow position: | chr6:49340579-49340906 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 3-329 |
| Cow position: | chr6:49340916-49341242 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-330 |
| Cow position: | chr6:49340832-49341159 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-329 |
| Cow position: | chr6:49340669-49340990 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 200 |
| Conread position: | 10-317 |
| Cow position: | chr6:49396308-49396615 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 126, 133 |
| Conread position: | 10-329 |
| Cow position: | chr6:49340503-49340822 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-329 |
| Cow position: | chr6:49340755-49341074 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 121, 114 |
| Conread position: | 10-329 |
| Cow position: | chr6:49341007-49341326 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-351 |
| Cow position: | chr6:49396154-49396478 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 291, 74 |
| Conread position: | 39-318 |
| Cow position: | chr6:49396253-49396532 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 55-329 |
| Cow position: | chr6:49340382-49340654 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 120-329 |
| Cow position: | chr6:49340361-49340570 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.