Cow genome map

Conread name: Ss1.1-rthg01_d21.5

Conread position: 1-324
Cow position:
Alignm length: 324
Alignm identity: 212
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 3-208
Cow position:
Alignm length: 206
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 3-213
Cow position:
Alignm length: 214
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 180, 171

Conread position: 3-245
Cow position:
Alignm length: 245
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 205, 182

Conread position: 3-265
Cow position:
Alignm length: 266
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 52, 41

Conread position: 3-284
Cow position:
Alignm length: 286
Alignm identity: 185
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 222, 181

Conread position: 3-284
Cow position:
Alignm length: 285
Alignm identity: 192
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 55, 31

Conread position: 3-286
Cow position:
Alignm length: 287
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 41

Conread position: 3-286
Cow position:
Alignm length: 284
Alignm identity: 194
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 3-315
Cow position:
Alignm length: 313
Alignm identity: 202
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 98, 0

Conread position: 3-323
Cow position:
Alignm length: 322
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 121

Conread position: 3-323
Cow position:
Alignm length: 321
Alignm identity: 216
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 3-325
Cow position:
Alignm length: 323
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 221
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 8, 0

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 216
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 217
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 191, 206

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 223
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 124, 117

Conread position: 3-329
Cow position:
Alignm length: 333
Alignm identity: 217
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 26

Conread position: 3-329
Cow position:
Alignm length: 333
Alignm identity: 218
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 33

Conread position: 3-329
Cow position:
Alignm length: 332
Alignm identity: 212
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 55, 36

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 214
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 130, 119

Conread position: 3-329
Cow position:
Alignm length: 329
Alignm identity: 219
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 203, 182

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-330
Cow position:
Alignm length: 330
Alignm identity: 224
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 26, 46

Conread position: 4-329
Cow position:
Alignm length: 327
Alignm identity: 209
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 214, 210

Conread position: 4-329
Cow position:
Alignm length: 328
Alignm identity: 206
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 60, 20

Conread position: 4-329
Cow position:
Alignm length: 327
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 307

Conread position: 4-331
Cow position:
Alignm length: 328
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 6-284
Cow position:
Alignm length: 282
Alignm identity: 182
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 42

Conread position: 8-329
Cow position:
Alignm length: 325
Alignm identity: 216
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 171, 167

Conread position: 9-329
Cow position:
Alignm length: 322
Alignm identity: 204
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 197, 182

Conread position: 9-329
Cow position:
Alignm length: 321
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-214
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 10-284
Cow position:
Alignm length: 275
Alignm identity: 190
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 10-323
Cow position:
Alignm length: 320
Alignm identity: 226
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 54, 62

Conread position: 10-323
Cow position:
Alignm length: 320
Alignm identity: 220
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 26, 117

Conread position: 10-326
Cow position:
Alignm length: 317
Alignm identity: 205
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 10-328
Cow position:
Alignm length: 319
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 202
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 34, 24

Conread position: 10-329
Cow position:
Alignm length: 322
Alignm identity: 219
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 300, 272

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 211
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 203, 198

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 66

Conread position: 10-329
Cow position:
Alignm length: 323
Alignm identity: 221
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 40, 33

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 213
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 211
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 288, 292

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 216
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 60

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 216
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 285, 238

Conread position: 10-329
Cow position:
Alignm length: 325
Alignm identity: 206
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 33

Conread position: 10-329
Cow position:
Alignm length: 325
Alignm identity: 211
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 32

Conread position: 10-329
Cow position:
Alignm length: 324
Alignm identity: 206
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 48, 24

Conread position: 10-329
Cow position:
Alignm length: 328
Alignm identity: 222
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 48, 24

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 216
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 316, 0

Conread position: 10-329
Cow position:
Alignm length: 322
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 208, 193

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 28

Conread position: 10-329
Cow position:
Alignm length: 322
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 193

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 11-329
Cow position:
Alignm length: 319
Alignm identity: 194
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 11-329
Cow position:
Alignm length: 321
Alignm identity: 208
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 32, 37

Conread position: 12-325
Cow position:
Alignm length: 316
Alignm identity: 209
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 289, 301

Conread position: 12-329
Cow position:
Alignm length: 319
Alignm identity: 217
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 39, 32

Conread position: 14-329
Cow position:
Alignm length: 318
Alignm identity: 214
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 36, 21

Conread position: 15-329
Cow position:
Alignm length: 316
Alignm identity: 205
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 197, 23

Conread position: 15-329
Cow position:
Alignm length: 317
Alignm identity: 202
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 56

Conread position: 16-284
Cow position:
Alignm length: 273
Alignm identity: 188
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 34, 18

Conread position: 16-284
Cow position:
Alignm length: 271
Alignm identity: 183
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 117, 136

Conread position: 23-285
Cow position:
Alignm length: 264
Alignm identity: 178
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 38, 49

Conread position: 45-329
Cow position:
Alignm length: 288
Alignm identity: 183
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 99, 92

Conread position: 46-329
Cow position:
Alignm length: 284
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 48-329
Cow position:
Alignm length: 286
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 10, 80

Conread position: 48-329
Cow position:
Alignm length: 287
Alignm identity: 190
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 12, 176

Conread position: 48-329
Cow position:
Alignm length: 286
Alignm identity: 185
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 10, 76

Conread position: 50-329
Cow position:
Alignm length: 282
Alignm identity: 193
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 18, 22

Conread position: 57-285
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 170, 139

Conread position: 57-288
Cow position:
Alignm length: 233
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 168, 157

Conread position: 57-329
Cow position:
Alignm length: 278
Alignm identity: 192
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 231, 139

Conread position: 58-288
Cow position:
Alignm length: 231
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 145-331
Cow position:
Alignm length: 187
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 136, 0

Show alignments to all cow chromosomes.