Cow genome map

Conread name: Ss1.1-rthg01_d21.5

Conread position: 1-326
Cow position:
Alignm length: 328
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 33

Conread position: 3-321
Cow position:
Alignm length: 320
Alignm identity: 210
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 266, 196

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 190, 195

Conread position: 3-329
Cow position:
Alignm length: 332
Alignm identity: 218
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 65, 196

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 35

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 330
Alignm identity: 220
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 47, 31

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 220
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 215, 200

Conread position: 3-329
Cow position:
Alignm length: 328
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 139

Conread position: 3-329
Cow position:
Alignm length: 327
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-329
Cow position:
Alignm length: 329
Alignm identity: 215
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 301, 286

Conread position: 3-329
Cow position:
Alignm length: 329
Alignm identity: 215
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 193, 207

Conread position: 4-270
Cow position:
Alignm length: 269
Alignm identity: 185
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 63, 67

Conread position: 4-329
Cow position:
Alignm length: 326
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-329
Cow position:
Alignm length: 327
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 30

Conread position: 6-329
Cow position:
Alignm length: 327
Alignm identity: 214
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 122, 116

Conread position: 8-323
Cow position:
Alignm length: 317
Alignm identity: 200
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 298, 302

Conread position: 9-329
Cow position:
Alignm length: 321
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 9-329
Cow position:
Alignm length: 321
Alignm identity: 206
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 9-329
Cow position:
Alignm length: 322
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 302

Conread position: 9-329
Cow position:
Alignm length: 322
Alignm identity: 203
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 41, 25

Conread position: 10-273
Cow position:
Alignm length: 265
Alignm identity: 175
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 24

Conread position: 10-325
Cow position:
Alignm length: 325
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 0

Conread position: 10-326
Cow position:
Alignm length: 319
Alignm identity: 214
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 169, 165

Conread position: 10-326
Cow position:
Alignm length: 318
Alignm identity: 207
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 24

Conread position: 10-328
Cow position:
Alignm length: 320
Alignm identity: 201
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 291, 285

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 324
Alignm identity: 227
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 14, 31

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 216
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 219
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 131, 126

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 214
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 283, 276

Conread position: 10-329
Cow position:
Alignm length: 322
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 127

Conread position: 10-329
Cow position:
Alignm length: 320
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 10-329
Cow position:
Alignm length: 324
Alignm identity: 204
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 24

Conread position: 10-329
Cow position:
Alignm length: 321
Alignm identity: 215
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 203, 193

Conread position: 10-329
Cow position:
Alignm length: 323
Alignm identity: 204
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 46, 30

Conread position: 10-330
Cow position:
Alignm length: 321
Alignm identity: 214
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 15-329
Cow position:
Alignm length: 317
Alignm identity: 206
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 44, 31

Conread position: 15-329
Cow position:
Alignm length: 315
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 16-318
Cow position:
Alignm length: 303
Alignm identity: 188
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 270, 0

Conread position: 16-329
Cow position:
Alignm length: 314
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 17-351
Cow position:
Alignm length: 336
Alignm identity: 229
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 195, 179

Conread position: 19-274
Cow position:
Alignm length: 257
Alignm identity: 166
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 194, 205

Conread position: 58-329
Cow position:
Alignm length: 272
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 64-329
Cow position:
Alignm length: 266
Alignm identity: 171
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 78-329
Cow position:
Alignm length: 252
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.