Cow genome map


           Conread name:
           Ss1.1-rthg01_d21.5
        

               Conread position:
               3-262
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-284
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-323
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               191, 215
               

               Conread position:
               3-326
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               205, 193
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 118
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 31
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 206
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 193
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 46
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 200
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-329
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               47, 36
               

               Conread position:
               3-331
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               231, 0
               

               Conread position:
               7-263
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               201, 184
               

               Conread position:
               8-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-351
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               58, 62
               

               Conread position:
               10-181
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-257
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               57, 61
               

               Conread position:
               10-325
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               54, 61
               

               Conread position:
               10-325
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 278
               

               Conread position:
               10-327
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               169, 165
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               131, 127
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               40, 28
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 183
               

               Conread position:
               10-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               11-329
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               128, 12
               

               Conread position:
               12-329
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 12
               

               Conread position:
               15-282
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               254, 248
               

               Conread position:
               16-351
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               14, 29
               

               Conread position:
               19-323
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               48, 52
               

               Conread position:
               19-329
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               34-329
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               177, 21
               

               Conread position:
               57-329
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 142
               

               Conread position:
               57-329
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.