Cow genome map


           Conread name:
           Ss1.1-rthg05_k4.5
        

               Conread position:
               333-580
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               237, 71
               

               Conread position:
               340-580
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               116, 16
               

               Conread position:
               346-572
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               103, 58
               

               Conread position:
               354-579
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 50
               

               Conread position:
               357-566
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               111, 47
               

               Conread position:
               357-580
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               182, 47
               

               Conread position:
               358-572
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               92, 46
               

               Conread position:
               358-580
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               107, 46
               

               Conread position:
               363-580
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               111, 41
               

               Conread position:
               375-571
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               66, 29
               

               Conread position:
               379-578
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               79, 21
               

               Conread position:
               578-756
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               578-756
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-721
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               579-728
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-729
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               579-732
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-732
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-733
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               579-737
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-743
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               579-743
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               80, 150
               

               Conread position:
               579-743
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               579-743
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-745
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               159, 0
               

               Conread position:
               579-745
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               159, 36
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               99, 112
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-754
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               579-755
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-755
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-755
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               166, 104
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               99, 107
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               145
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               144
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               145
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               47, 41
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               90, 83
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               97, 57
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               60, 80
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               143
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               132, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               99, 54
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               68, 169
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               125
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               96, 57
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               98, 89
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               579-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               580-756
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               128
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               159, 154
               

               Conread position:
               581-733
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               581-739
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               581-755
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               581-756
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               581-756
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               581-756
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               107, 112
               

               Conread position:
               581-756
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               589-755
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               138, 92
               

               Conread position:
               598-754
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               599-756
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               599-756
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               602-754
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               604-756
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               605-756
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               606-755
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               618-716
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.