Cow genome map

Conread name: Ss1.1-rthg05_k4.5

Conread position: 331-578
Cow position:
Alignm length: 254
Alignm identity: 182
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 38, 78

Conread position: 346-572
Cow position:
Alignm length: 232
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 54

Conread position: 357-572
Cow position:
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 48

Conread position: 358-580
Cow position:
Alignm length: 226
Alignm identity: 153
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 107, 46

Conread position: 552-756
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 118

Conread position: 578-756
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 578-756
Cow position:
Alignm length: 179
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 578-756
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 110, 114

Conread position: 578-756
Cow position:
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 579-686
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 579-686
Cow position:
Alignm length: 110
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 579-726
Cow position:
Alignm length: 148
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 118, 0

Conread position: 579-733
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 125, 0

Conread position: 579-734
Cow position:
Alignm length: 156
Alignm identity: 128
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 579-737
Cow position:
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 579-737
Cow position:
Alignm length: 159
Alignm identity: 119
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 72, 0

Conread position: 579-737
Cow position:
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 579-743
Cow position:
Alignm length: 166
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 579-743
Cow position:
Alignm length: 165
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 579-743
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 579-743
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 42, 0

Conread position: 579-743
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 579-743
Cow position:
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 59

Conread position: 579-743
Cow position:
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 579-743
Cow position:
Alignm length: 165
Alignm identity: 130
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 579-745
Cow position:
Alignm length: 168
Alignm identity: 133
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 110, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 177
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 92

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 123
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 144, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 128
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 137
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 129
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 127
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 579-754
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 579-755
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 173, 58

Conread position: 579-755
Cow position:
Alignm length: 177
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 0

Conread position: 579-755
Cow position:
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 579-755
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 33, 38

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 125
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 579-756
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 33

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 123
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 579-756
Cow position:
Alignm length: 179
Alignm identity: 124
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 156, 139

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 579-756
Cow position:
Alignm length: 183
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 579-756
Cow position:
Alignm length: 179
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 147, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 131
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 579-756
Cow position:
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 159, 64

Conread position: 579-756
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 107

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 579-756
Cow position:
Alignm length: 179
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 159, 147

Conread position: 579-756
Cow position:
Alignm length: 180
Alignm identity: 127
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 69, 172

Conread position: 579-756
Cow position:
Alignm length: 180
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 171, 114

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 25, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 18, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 84, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 121
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 579-756
Cow position:
Alignm length: 179
Alignm identity: 123
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 107, 112

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 89, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 579-756
Cow position:
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 111, 104

Conread position: 579-756
Cow position:
Alignm length: 178
Alignm identity: 124
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 580-753
Cow position:
Alignm length: 174
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 580-756
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 580-756
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 581-743
Cow position:
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 581-754
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 581-754
Cow position:
Alignm length: 174
Alignm identity: 124
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 134, 0

Conread position: 581-756
Cow position:
Alignm length: 177
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 157, 166

Conread position: 581-756
Cow position:
Alignm length: 176
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 137, 0

Conread position: 581-756
Cow position:
Alignm length: 176
Alignm identity: 139
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 0

Conread position: 581-756
Cow position:
Alignm length: 176
Alignm identity: 136
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 581-756
Cow position:
Alignm length: 176
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 581-756
Cow position:
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 97, 36

Conread position: 582-742
Cow position:
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 76

Conread position: 582-756
Cow position:
Alignm length: 176
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 122

Conread position: 582-756
Cow position:
Alignm length: 176
Alignm identity: 135
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 135, 0

Conread position: 582-756
Cow position:
Alignm length: 175
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 582-756
Cow position:
Alignm length: 175
Alignm identity: 132
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 583-696
Cow position:
Alignm length: 115
Alignm identity: 93
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 590-737
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 590-754
Cow position:
Alignm length: 165
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 591-754
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 591-756
Cow position:
Alignm length: 166
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 83, 0

Conread position: 591-756
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 121, 0

Show alignments to all cow chromosomes.