Cow genome map


           Conread name:
           Ss1.1-rthg11_n10.5
        

               Conread position:
               2-794
               

               Cow position:
               
               

               Alignm length:
               811
               

               Alignm identity:
               651
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 250
               

               Conread position:
               71-422
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               44, 244
               

               Conread position:
               81-356
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               68, 34
               

               Conread position:
               82-367
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               51, 33
               

               Conread position:
               88-287
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               28, 81
               

               Conread position:
               97-399
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               52, 18
               

               Conread position:
               104-263
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 11
               

               Conread position:
               104-278
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 11
               

               Conread position:
               104-299
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               78, 11
               

               Conread position:
               104-335
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               58, 11
               

               Conread position:
               104-335
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               76, 11
               

               Conread position:
               108-303
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               74, 7
               

               Conread position:
               114-227
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               114-349
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               72, 176
               

               Conread position:
               114-356
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               114-402
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               190, 87
               

               Conread position:
               114-430
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               72, 43
               

               Conread position:
               115-333
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 111
               

               Conread position:
               115-350
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               115-356
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               52, 74
               

               Conread position:
               120-333
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               45, 70
               

               Conread position:
               120-345
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               47, 188
               

               Conread position:
               120-417
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               230
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               106, 68
               

               Conread position:
               120-430
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               233
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               38, 152
               

               Conread position:
               123-356
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 23
               

               Conread position:
               124-278
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 71
               

               Conread position:
               124-299
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               6, 161
               

               Conread position:
               124-314
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               43, 163
               

               Conread position:
               124-349
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               58, 150
               

               Conread position:
               124-434
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               5, 31
               

               Conread position:
               124-442
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               25, 137
               

               Conread position:
               124-447
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               36, 185
               

               Conread position:
               125-425
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               61, 48
               

               Conread position:
               125-430
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               127-350
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               24, 159
               

               Conread position:
               127-430
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               132-442
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               50, 56
               

               Conread position:
               787-1101
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 117
               
Show alignments to all cow chromosomes.