Cow genome map
| Conread name: | Ss1.1-rthg14_d21.5 |
| Conread position: | 1-154 |
| Cow position: | chr11:42311663-42311818 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 1-203 |
| Cow position: | chr11:21930239-21930442 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 18, 112 |
| Conread position: | 1-206 |
| Cow position: | chr11:75554208-75554407 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 75 |
| Conread position: | 1-222 |
| Cow position: | chr11:84390324-84390101 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 18, 133 |
| Conread position: | 1-242 |
| Cow position: | chr11:18887636-18887393 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 18, 116 |
| Conread position: | 1-267 |
| Cow position: | chr11:12094344-12094079 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 18, 160 |
| Conread position: | 1-294 |
| Cow position: | chr11:29232236-29232525 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 109 |
| Conread position: | 1-294 |
| Cow position: | chr11:49558900-49559188 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 17, 120 |
| Conread position: | 1-295 |
| Cow position: | chr11:47759503-47759800 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-297 |
| Cow position: | chr11:10216565-10216865 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 219 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 2-144 |
| Cow position: | chr11:37358065-37357922 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-218 |
| Cow position: | chr11:18070421-18070633 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 2-242 |
| Cow position: | chr11:38219557-38219799 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 66 |
| Conread position: | 2-258 |
| Cow position: | chr11:13048689-13048936 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-285 |
| Cow position: | chr11:9216305-9216584 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 75 |
| Conread position: | 2-295 |
| Cow position: | chr11:1489365-1489658 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 17, 199 |
| Conread position: | 3-194 |
| Cow position: | chr11:15898215-15898406 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 17, 108 |
| Conread position: | 3-267 |
| Cow position: | chr11:3493770-3493506 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 16, 108 |
| Conread position: | 3-267 |
| Cow position: | chr11:17546939-17546674 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 16, 45 |
| Conread position: | 3-267 |
| Cow position: | chr11:20733460-20733730 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-267 |
| Cow position: | chr11:44518089-44518355 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 16, 11 |
| Conread position: | 3-285 |
| Cow position: | chr11:4063092-4063366 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 16, 98 |
| Conread position: | 3-285 |
| Cow position: | chr11:27669561-27669839 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 200 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 19, 146 |
| Conread position: | 3-285 |
| Cow position: | chr11:54484636-54484919 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 203 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 22, 263 |
| Conread position: | 3-294 |
| Cow position: | chr11:1495311-1495608 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-295 |
| Cow position: | chr11:5342143-5342438 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 194 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-298 |
| Cow position: | chr11:50027103-50027391 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 16, 110 |
| Conread position: | 3-382 |
| Cow position: | chr11:4034570-4034963 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 16, 111 |
| Conread position: | 3-870 |
| Cow position: | chr11:21444053-21443169 (view UCSC Genome Browser custom track) |
| Alignm length: | 907 |
| Alignm identity: | 595 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 45 |
| Conread position: | 5-205 |
| Cow position: | chr11:22935866-22935667 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 5-282 |
| Cow position: | chr11:44582561-44582839 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 7-199 |
| Cow position: | chr11:72310262-72310455 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-295 |
| Cow position: | chr11:58135168-58134877 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 7-381 |
| Cow position: | chr11:4269630-4270012 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 9-280 |
| Cow position: | chr11:21902327-21902596 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 195 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 113, 10 |
| Conread position: | 10-267 |
| Cow position: | chr11:15984404-15984137 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-267 |
| Cow position: | chr11:17106914-17107174 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-267 |
| Cow position: | chr11:19063303-19063561 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-267 |
| Cow position: | chr11:67451264-67451006 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 10-267 |
| Cow position: | chr11:67845797-67846057 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 10-285 |
| Cow position: | chr11:28053845-28054116 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 196 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 9, 103 |
| Conread position: | 10-285 |
| Cow position: | chr11:38834666-38834942 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-285 |
| Cow position: | chr11:45921840-45922113 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 12, 52 |
| Conread position: | 10-285 |
| Cow position: | chr11:85393045-85393314 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 9, 197 |
| Conread position: | 10-291 |
| Cow position: | chr11:24394082-24393803 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 75 |
| Conread position: | 10-294 |
| Cow position: | chr11:9156382-9156675 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 9, 106 |
| Conread position: | 10-295 |
| Cow position: | chr11:10848219-10847934 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 10-295 |
| Cow position: | chr11:19101726-19102012 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-295 |
| Cow position: | chr11:26124158-26124443 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 30 |
| Conread position: | 10-295 |
| Cow position: | chr11:29667837-29668125 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-295 |
| Cow position: | chr11:44156478-44156764 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-295 |
| Cow position: | chr11:44252566-44252283 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 175 |
| Conread position: | 10-295 |
| Cow position: | chr11:71330364-71330076 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 201 |
| Conread position: | 11-294 |
| Cow position: | chr11:45654251-45654535 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 60 |
| Conread position: | 17-208 |
| Cow position: | chr11:66438364-66438554 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 84 |
| Conread position: | 17-226 |
| Cow position: | chr11:3252102-3252307 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 111, 34 |
| Conread position: | 17-238 |
| Cow position: | chr11:10883078-10882859 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 105, 95 |
| Conread position: | 17-253 |
| Cow position: | chr11:71560809-71561042 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 76, 14 |
| Conread position: | 17-285 |
| Cow position: | chr11:23127136-23127402 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 97, 93 |
| Conread position: | 17-295 |
| Cow position: | chr11:41169933-41170212 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 17-295 |
| Cow position: | chr11:80473505-80473784 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 76, 67 |
| Conread position: | 18-260 |
| Cow position: | chr11:61400306-61400546 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 18-267 |
| Cow position: | chr11:28229006-28229244 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 18-267 |
| Cow position: | chr11:33193798-33194047 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 102, 29 |
| Conread position: | 18-268 |
| Cow position: | chr11:4056718-4056967 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 101, 22 |
| Conread position: | 18-294 |
| Cow position: | chr11:31861661-31861388 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 24, 171 |
| Conread position: | 18-295 |
| Cow position: | chr11:12357655-12357933 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 0 |
| Conread position: | 18-295 |
| Cow position: | chr11:28108897-28108620 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-295 |
| Cow position: | chr11:43513872-43514149 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-295 |
| Cow position: | chr11:64081322-64081599 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-295 |
| Cow position: | chr11:24336441-24336706 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 119, 87 |
| Conread position: | 23-286 |
| Cow position: | chr11:30123092-30123354 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 200, 10 |
| Conread position: | 26-208 |
| Cow position: | chr11:65980204-65980386 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 26-251 |
| Cow position: | chr11:9762999-9763221 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 14 |
| Conread position: | 26-252 |
| Cow position: | chr11:5353728-5353946 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 90, 84 |
| Conread position: | 33-285 |
| Cow position: | chr11:26564345-26564586 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 81, 73 |
| Conread position: | 33-295 |
| Cow position: | chr11:31926914-31926655 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 30, 14 |
| Conread position: | 33-298 |
| Cow position: | chr11:36763496-36763227 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 198 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 171, 223 |
| Conread position: | 33-850 |
| Cow position: | chr11:30188587-30187736 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 32 |
| Conread position: | 41-215 |
| Cow position: | chr11:7117184-7117013 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 41-255 |
| Cow position: | chr11:9168778-9168990 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 73, 18 |
| Conread position: | 41-268 |
| Cow position: | chr11:77253994-77254217 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 148, 8 |
| Conread position: | 41-285 |
| Cow position: | chr11:53431321-53431565 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-295 |
| Cow position: | chr11:3855971-3855717 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 129, 179 |
| Conread position: | 41-295 |
| Cow position: | chr11:26548248-26547994 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 251 |
| Conread position: | 41-295 |
| Cow position: | chr11:73478045-73477792 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 41-296 |
| Cow position: | chr11:11988863-11988594 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 41-742 |
| Cow position: | chr11:57627321-57628074 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 255, 301 |
| Conread position: | 43-211 |
| Cow position: | chr11:49409458-49409290 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 159, 108 |
| Conread position: | 43-267 |
| Cow position: | chr11:63654602-63654825 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 43-680 |
| Cow position: | chr11:40775275-40775961 (view UCSC Genome Browser custom track) |
| Alignm length: | 691 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 307 |
| Conread position: | 44-267 |
| Cow position: | chr11:53286431-53286653 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 46-294 |
| Cow position: | chr11:52561965-52562210 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 221, 101 |
| Conread position: | 56-213 |
| Cow position: | chr11:7726425-7726580 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 56-285 |
| Cow position: | chr11:20511117-20510889 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 155, 0 |
| Conread position: | 57-268 |
| Cow position: | chr11:10091400-10091189 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 69-295 |
| Cow position: | chr11:23878004-23877779 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 76-295 |
| Cow position: | chr11:9601630-9601849 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 45, 33 |
| Conread position: | 77-282 |
| Cow position: | chr11:30252900-30252694 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 77-294 |
| Cow position: | chr11:71981828-71982043 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 89-262 |
| Cow position: | chr11:51279729-51279902 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 89-285 |
| Cow position: | chr11:52657389-52657579 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 63, 44 |
| Conread position: | 98-295 |
| Cow position: | chr11:28391322-28391126 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 103-267 |
| Cow position: | chr11:52420066-52419902 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 103-381 |
| Cow position: | chr11:26070382-26070669 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 47, 235 |
| Conread position: | 113-285 |
| Cow position: | chr11:4026895-4027067 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 120-242 |
| Cow position: | chr11:36712351-36712472 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 132-666 |
| Cow position: | chr11:42432781-42432199 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 438 |
| Conread position: | 139-296 |
| Cow position: | chr11:46245920-46246079 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 150-294 |
| Cow position: | chr11:39803832-39803689 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 78 |
| Conread position: | 293-730 |
| Cow position: | chr11:28108599-28108134 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 301 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 69, 54 |
| Conread position: | 293-731 |
| Cow position: | chr11:31874316-31874787 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 303 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 90, 127 |
| Conread position: | 293-742 |
| Cow position: | chr11:15984088-15983596 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 325 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 51, 272 |
| Conread position: | 297-594 |
| Cow position: | chr11:13066227-13066532 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 100, 38 |
| Conread position: | 356-861 |
| Cow position: | chr11:30206297-30205788 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 7 |
| Conread position: | 371-667 |
| Cow position: | chr11:36763119-36762809 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 41, 165 |
| Conread position: | 372-685 |
| Cow position: | chr11:1495722-1496051 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 185 |
| Conread position: | 372-730 |
| Cow position: | chr11:36743813-36744196 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 177 |
| Conread position: | 372-742 |
| Cow position: | chr11:67450860-67450470 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 260 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 372-748 |
| Cow position: | chr11:9606212-9606609 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 262 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 372-760 |
| Cow position: | chr11:9734304-9734708 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 374-685 |
| Cow position: | chr11:64081717-64082055 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 175 |
| Conread position: | 374-730 |
| Cow position: | chr11:64046364-64045982 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 175 |
| Conread position: | 376-626 |
| Cow position: | chr11:10216970-10217226 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 114 |
| Conread position: | 378-869 |
| Cow position: | chr11:52885706-52886196 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 339 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 32, 111 |
| Conread position: | 384-685 |
| Cow position: | chr11:45111972-45111651 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 406-752 |
| Cow position: | chr11:9156836-9157186 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 440-797 |
| Cow position: | chr11:66727663-66727295 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 99 |
| Conread position: | 444-730 |
| Cow position: | chr11:5342934-5343233 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 7, 92 |
| Conread position: | 444-730 |
| Cow position: | chr11:61400777-61401067 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 58 |
| Conread position: | 444-730 |
| Cow position: | chr11:73477591-73477292 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 7, 98 |
| Conread position: | 444-742 |
| Cow position: | chr11:17107404-17107714 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 92 |
| Conread position: | 444-742 |
| Cow position: | chr11:19063967-19064277 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 444-742 |
| Cow position: | chr11:67846288-67846599 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 7, 92 |
| Conread position: | 444-855 |
| Cow position: | chr11:33194272-33194690 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 272 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 7, 97 |
| Conread position: | 446-714 |
| Cow position: | chr11:43514350-43514629 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 87 |
| Conread position: | 446-751 |
| Cow position: | chr11:4027280-4027595 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 34, 96 |
| Conread position: | 446-807 |
| Cow position: | chr11:15898667-15899032 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 174, 89 |
| Conread position: | 446-869 |
| Cow position: | chr11:10090962-10090521 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 89 |
| Conread position: | 447-855 |
| Cow position: | chr11:11677629-11677214 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 292 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 36, 87 |
| Conread position: | 450-754 |
| Cow position: | chr11:12093837-12093526 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 35, 91 |
| Conread position: | 450-754 |
| Cow position: | chr11:31926448-31926139 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 461-726 |
| Cow position: | chr11:32271053-32271326 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 93, 68 |
| Conread position: | 466-754 |
| Cow position: | chr11:47760435-47760732 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 99, 64 |
| Conread position: | 467-761 |
| Cow position: | chr11:84389887-84389587 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 87, 45 |
| Conread position: | 480-862 |
| Cow position: | chr11:28064074-28063696 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 252, 48 |
| Conread position: | 497-840 |
| Cow position: | chr11:29233025-29233389 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 39 |
| Conread position: | 497-904 |
| Cow position: | chr11:8283687-8283274 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 120, 39 |
| Conread position: | 578-874 |
| Cow position: | chr11:39802585-39802286 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 34, 23 |
| Conread position: | 599-869 |
| Cow position: | chr11:30124297-30124572 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 97 |
Show alignments to all cow chromosomes.