Cow genome map

Conread name: Ss1.1-rthg14_d21.5

Conread position: 1-216
Cow position:
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 18, 26

Conread position: 1-220
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 199

Conread position: 1-696
Cow position:
Alignm length: 752
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 33

Conread position: 2-151
Cow position:
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 58

Conread position: 2-179
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 10, 38

Conread position: 3-253
Cow position:
Alignm length: 253
Alignm identity: 182
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 15, 45

Conread position: 3-295
Cow position:
Alignm length: 301
Alignm identity: 200
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 16, 112

Conread position: 5-253
Cow position:
Alignm length: 253
Alignm identity: 169
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 134, 33

Conread position: 5-285
Cow position:
Alignm length: 282
Alignm identity: 191
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 14, 219

Conread position: 5-294
Cow position:
Alignm length: 291
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 5-295
Cow position:
Alignm length: 293
Alignm identity: 205
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 14, 64

Conread position: 5-295
Cow position:
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 0

Conread position: 7-285
Cow position:
Alignm length: 286
Alignm identity: 204
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 12, 105

Conread position: 10-285
Cow position:
Alignm length: 277
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 10-295
Cow position:
Alignm length: 288
Alignm identity: 196
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 9, 42

Conread position: 10-295
Cow position:
Alignm length: 287
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 10-295
Cow position:
Alignm length: 288
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 23

Conread position: 14-291
Cow position:
Alignm length: 279
Alignm identity: 184
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 38

Conread position: 17-221
Cow position:
Alignm length: 205
Alignm identity: 155
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 18-266
Cow position:
Alignm length: 256
Alignm identity: 168
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 192

Conread position: 18-285
Cow position:
Alignm length: 269
Alignm identity: 189
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 0

Conread position: 18-295
Cow position:
Alignm length: 282
Alignm identity: 201
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 15, 192

Conread position: 18-295
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 21-200
Cow position:
Alignm length: 180
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 22-295
Cow position:
Alignm length: 274
Alignm identity: 195
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 17, 0

Conread position: 24-281
Cow position:
Alignm length: 258
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 31, 0

Conread position: 28-294
Cow position:
Alignm length: 267
Alignm identity: 183
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 33-222
Cow position:
Alignm length: 195
Alignm identity: 139
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 41-295
Cow position:
Alignm length: 256
Alignm identity: 181
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 12, 227

Conread position: 41-757
Cow position:
Alignm length: 781
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 8

Conread position: 42-325
Cow position:
Alignm length: 284
Alignm identity: 189
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 0

Conread position: 43-295
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 29, 0

Conread position: 44-295
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 111, 0

Conread position: 56-230
Cow position:
Alignm length: 175
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 164, 0

Conread position: 89-742
Cow position:
Alignm length: 670
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 252

Conread position: 95-285
Cow position:
Alignm length: 192
Alignm identity: 136
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 6, 17

Conread position: 115-513
Cow position:
Alignm length: 442
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 140

Conread position: 293-775
Cow position:
Alignm length: 527
Alignm identity: 312
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 58, 272

Conread position: 377-730
Cow position:
Alignm length: 382
Alignm identity: 252
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 33, 172

Conread position: 442-823
Cow position:
Alignm length: 400
Alignm identity: 272
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 45, 29

Conread position: 444-742
Cow position:
Alignm length: 312
Alignm identity: 209
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 7, 92

Conread position: 455-855
Cow position:
Alignm length: 415
Alignm identity: 265
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 28, 80

Conread position: 461-755
Cow position:
Alignm length: 310
Alignm identity: 207
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 80

Conread position: 512-876
Cow position:
Alignm length: 376
Alignm identity: 244
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 25

Show alignments to all cow chromosomes.