Cow genome map
| Conread name: | Ss1.1-rthg14_d21.5 |
| Conread position: | 1-203 |
| Cow position: | chr14:38228895-38229091 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 33, 47 |
| Conread position: | 1-219 |
| Cow position: | chr14:21744826-21744609 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 32, 39 |
| Conread position: | 1-222 |
| Cow position: | chr14:37413024-37413245 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 18, 84 |
| Conread position: | 1-237 |
| Cow position: | chr14:41409640-41409400 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 17, 49 |
| Conread position: | 1-277 |
| Cow position: | chr14:30735695-30735425 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 186 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 18, 48 |
| Conread position: | 1-280 |
| Cow position: | chr14:37455343-37455618 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 20, 90 |
| Conread position: | 1-282 |
| Cow position: | chr14:44775316-44775597 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 18, 172 |
| Conread position: | 1-285 |
| Cow position: | chr14:29775493-29775781 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-285 |
| Cow position: | chr14:44676840-44676555 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 18, 178 |
| Conread position: | 1-294 |
| Cow position: | chr14:11561308-11561604 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-294 |
| Cow position: | chr14:33402409-33402115 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 210 |
| Conread position: | 1-294 |
| Cow position: | chr14:33674133-33673844 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 283, 14 |
| Conread position: | 1-295 |
| Cow position: | chr14:5074687-5074394 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 16, 128 |
| Conread position: | 1-295 |
| Cow position: | chr14:17760161-17760452 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 204 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-295 |
| Cow position: | chr14:45711002-45711289 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 1-295 |
| Cow position: | chr14:50111509-50111218 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 203 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 1-296 |
| Cow position: | chr14:9099999-9100294 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 207 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 18, 126 |
| Conread position: | 1-359 |
| Cow position: | chr14:35424805-35424449 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 246 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 273, 14 |
| Conread position: | 1-861 |
| Cow position: | chr14:33237742-33236840 (view UCSC Genome Browser custom track) |
| Alignm length: | 919 |
| Alignm identity: | 648 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 282, 31 |
| Conread position: | 2-285 |
| Cow position: | chr14:16918998-16919278 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 28 |
| Conread position: | 2-293 |
| Cow position: | chr14:40341773-40341480 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 244 |
| Conread position: | 2-294 |
| Cow position: | chr14:38147728-38147425 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 38 |
| Conread position: | 2-295 |
| Cow position: | chr14:48404250-48404539 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 189 |
| Conread position: | 2-300 |
| Cow position: | chr14:40168999-40169296 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 222 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 2-375 |
| Cow position: | chr14:35365538-35365910 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 3-267 |
| Cow position: | chr14:23258076-23257808 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 16, 189 |
| Conread position: | 3-267 |
| Cow position: | chr14:27978079-27977815 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 45 |
| Conread position: | 3-267 |
| Cow position: | chr14:46391812-46392078 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 16, 116 |
| Conread position: | 3-295 |
| Cow position: | chr14:2285059-2284764 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 15, 67 |
| Conread position: | 3-295 |
| Cow position: | chr14:29046966-29047259 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 20, 116 |
| Conread position: | 3-295 |
| Cow position: | chr14:33393068-33393361 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 16, 202 |
| Conread position: | 3-298 |
| Cow position: | chr14:29705780-29705489 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 17, 109 |
| Conread position: | 4-295 |
| Cow position: | chr14:44131603-44131322 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 16, 187 |
| Conread position: | 5-291 |
| Cow position: | chr14:19327545-19327842 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 5-295 |
| Cow position: | chr14:5512541-5512250 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 5-295 |
| Cow position: | chr14:7473080-7472788 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 15, 238 |
| Conread position: | 5-295 |
| Cow position: | chr14:15275516-15275802 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 14, 126 |
| Conread position: | 5-295 |
| Cow position: | chr14:48601621-48601901 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 15, 169 |
| Conread position: | 6-294 |
| Cow position: | chr14:45081770-45081477 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 13, 33 |
| Conread position: | 6-296 |
| Cow position: | chr14:35385356-35385649 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 13, 184 |
| Conread position: | 7-294 |
| Cow position: | chr14:13863375-13863667 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 12, 223 |
| Conread position: | 7-295 |
| Cow position: | chr14:12742353-12742641 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 7-295 |
| Cow position: | chr14:16272577-16272870 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 9-473 |
| Cow position: | chr14:34776933-34776464 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 71 |
| Conread position: | 10-264 |
| Cow position: | chr14:33489116-33488863 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 193 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 10-267 |
| Cow position: | chr14:9046288-9046029 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 10-285 |
| Cow position: | chr14:17000347-17000623 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-285 |
| Cow position: | chr14:32447504-32447232 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 10-285 |
| Cow position: | chr14:38815008-38815271 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 9, 111 |
| Conread position: | 10-285 |
| Cow position: | chr14:45671335-45671611 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 192 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 9, 196 |
| Conread position: | 10-285 |
| Cow position: | chr14:48253600-48253875 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 10-292 |
| Cow position: | chr14:44227105-44226824 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 15, 30 |
| Conread position: | 10-295 |
| Cow position: | chr14:190680-190393 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 228 |
| Conread position: | 10-295 |
| Cow position: | chr14:5529785-5529494 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-295 |
| Cow position: | chr14:12611162-12610877 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 212 |
| Conread position: | 10-295 |
| Cow position: | chr14:17686111-17685825 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-295 |
| Cow position: | chr14:37224903-37224617 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 74 |
| Conread position: | 10-381 |
| Cow position: | chr14:13779650-13779276 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 9, 42 |
| Conread position: | 10-751 |
| Cow position: | chr14:22030733-22031509 (view UCSC Genome Browser custom track) |
| Alignm length: | 786 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 178 |
| Conread position: | 17-228 |
| Cow position: | chr14:33766828-33766618 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 191, 166 |
| Conread position: | 17-253 |
| Cow position: | chr14:11153454-11153689 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 18-245 |
| Cow position: | chr14:43558939-43558714 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 24, 93 |
| Conread position: | 18-285 |
| Cow position: | chr14:29580869-29580613 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 150, 91 |
| Conread position: | 18-285 |
| Cow position: | chr14:44286550-44286815 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 18-285 |
| Cow position: | chr14:44288454-44288719 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 18-287 |
| Cow position: | chr14:12899800-12899530 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 24, 195 |
| Conread position: | 18-294 |
| Cow position: | chr14:38530756-38531035 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 266, 168 |
| Conread position: | 18-295 |
| Cow position: | chr14:10475385-10475654 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 18, 41 |
| Conread position: | 18-685 |
| Cow position: | chr14:50139264-50138569 (view UCSC Genome Browser custom track) |
| Alignm length: | 702 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 21 |
| Conread position: | 18-855 |
| Cow position: | chr14:751269-750375 (view UCSC Genome Browser custom track) |
| Alignm length: | 903 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 329 |
| Conread position: | 19-295 |
| Cow position: | chr14:48825989-48825709 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 31, 238 |
| Conread position: | 22-295 |
| Cow position: | chr14:2294973-2294700 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 94, 88 |
| Conread position: | 23-222 |
| Cow position: | chr14:49046299-49046103 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 24-294 |
| Cow position: | chr14:13274297-13274030 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 169, 129 |
| Conread position: | 24-295 |
| Cow position: | chr14:44378494-44378228 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 24-832 |
| Cow position: | chr14:30705631-30706450 (view UCSC Genome Browser custom track) |
| Alignm length: | 842 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 17 |
| Conread position: | 27-222 |
| Cow position: | chr14:148334-148140 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 74 |
| Conread position: | 27-295 |
| Cow position: | chr14:44689749-44689481 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 192 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 83, 176 |
| Conread position: | 28-216 |
| Cow position: | chr14:17051652-17051841 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 30-294 |
| Cow position: | chr14:13462272-13462014 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 242, 58 |
| Conread position: | 31-295 |
| Cow position: | chr14:47642400-47642134 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 23, 69 |
| Conread position: | 33-284 |
| Cow position: | chr14:33677752-33677501 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 66, 189 |
| Conread position: | 33-394 |
| Cow position: | chr14:9514595-9514953 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 243 |
| Conread position: | 33-745 |
| Cow position: | chr14:13620464-13621225 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 6 |
| Conread position: | 41-267 |
| Cow position: | chr14:30584278-30584502 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 41-294 |
| Cow position: | chr14:47655983-47655733 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 41-295 |
| Cow position: | chr14:20783138-20782888 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 41-295 |
| Cow position: | chr14:44582033-44581780 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 44-295 |
| Cow position: | chr14:45189100-45189352 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 10, 169 |
| Conread position: | 44-594 |
| Cow position: | chr14:44552556-44551966 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 386 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 229, 35 |
| Conread position: | 49-295 |
| Cow position: | chr14:46465992-46465749 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 53-267 |
| Cow position: | chr14:17490791-17491005 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-266 |
| Cow position: | chr14:16343483-16343694 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 57-285 |
| Cow position: | chr14:48971343-48971115 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 75-222 |
| Cow position: | chr14:44256331-44256478 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 35 |
| Conread position: | 89-263 |
| Cow position: | chr14:46401410-46401239 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 114-298 |
| Cow position: | chr14:45678722-45678907 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 173, 78 |
| Conread position: | 115-269 |
| Cow position: | chr14:45161697-45161546 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 122-294 |
| Cow position: | chr14:47923712-47923539 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 162, 89 |
| Conread position: | 155-285 |
| Cow position: | chr14:13303587-13303457 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 293-730 |
| Cow position: | chr14:45671642-45672119 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 316 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 65, 47 |
| Conread position: | 293-743 |
| Cow position: | chr14:33393382-33393865 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 316 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 69, 47 |
| Conread position: | 293-748 |
| Cow position: | chr14:13863685-13864166 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 327 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 293-869 |
| Cow position: | chr14:44581759-44581156 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 394 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 59, 204 |
| Conread position: | 297-692 |
| Cow position: | chr14:34861060-34860652 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 69, 179 |
| Conread position: | 297-742 |
| Cow position: | chr14:2284739-2284253 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 317 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 55, 43 |
| Conread position: | 371-742 |
| Cow position: | chr14:17491148-17491542 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 372-754 |
| Cow position: | chr14:17000749-17001152 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 271 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 43, 173 |
| Conread position: | 377-755 |
| Cow position: | chr14:44286938-44287341 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 33, 179 |
| Conread position: | 383-866 |
| Cow position: | chr14:47655440-47654951 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 76 |
| Conread position: | 389-727 |
| Cow position: | chr14:45711696-45712055 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 391-857 |
| Cow position: | chr14:46513827-46513342 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 330 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 156 |
| Conread position: | 404-690 |
| Cow position: | chr14:40738786-40738484 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 138 |
| Conread position: | 442-753 |
| Cow position: | chr14:44226627-44226306 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 39, 91 |
| Conread position: | 443-862 |
| Cow position: | chr14:33488181-33487744 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 296 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 40, 5 |
| Conread position: | 443-869 |
| Cow position: | chr14:38147242-38146782 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 91 |
| Conread position: | 444-696 |
| Cow position: | chr14:29777273-29777540 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 39, 91 |
| Conread position: | 444-713 |
| Cow position: | chr14:30735038-30735318 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 90 |
| Conread position: | 444-722 |
| Cow position: | chr14:30584728-30585017 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 7, 92 |
| Conread position: | 444-742 |
| Cow position: | chr14:9045792-9045480 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 7, 92 |
| Conread position: | 444-757 |
| Cow position: | chr14:23257584-23257259 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 221 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 7, 92 |
| Conread position: | 444-840 |
| Cow position: | chr14:41409099-41408701 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 278 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 115, 42 |
| Conread position: | 446-754 |
| Cow position: | chr14:5512048-5511732 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 446-754 |
| Cow position: | chr14:17685625-17685306 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 37, 95 |
| Conread position: | 446-819 |
| Cow position: | chr14:16273074-16273456 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 41, 95 |
| Conread position: | 446-869 |
| Cow position: | chr14:44378027-44377604 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 282 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 29, 93 |
| Conread position: | 449-855 |
| Cow position: | chr14:46529450-46529038 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 286 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 51 |
| Conread position: | 450-685 |
| Cow position: | chr14:38531519-38531762 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 116, 86 |
| Conread position: | 450-752 |
| Cow position: | chr14:44686268-44685953 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 91 |
| Conread position: | 456-733 |
| Cow position: | chr14:45161316-45161026 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 204 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 21, 78 |
| Conread position: | 461-743 |
| Cow position: | chr14:45028919-45029211 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 461-855 |
| Cow position: | chr14:29047702-29048098 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 104, 9 |
| Conread position: | 468-690 |
| Cow position: | chr14:45917849-45917613 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 471-752 |
| Cow position: | chr14:30596186-30596474 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 95, 59 |
| Conread position: | 476-850 |
| Cow position: | chr14:38815612-38815998 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 259 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 73, 61 |
| Conread position: | 497-874 |
| Cow position: | chr14:37457235-37457623 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 270 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 74, 39 |
| Conread position: | 497-885 |
| Cow position: | chr14:33342305-33341910 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 271 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 69, 105 |
| Conread position: | 497-885 |
| Cow position: | chr14:37413270-37413670 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 270 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 94, 39 |
| Conread position: | 508-861 |
| Cow position: | chr14:14308396-14308765 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 46, 34 |
| Conread position: | 564-798 |
| Cow position: | chr14:13323769-13324010 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 601-871 |
| Cow position: | chr14:34776288-34776013 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 17, 112 |
| Conread position: | 684-874 |
| Cow position: | chr14:48405319-48405512 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 10 |
Show alignments to all cow chromosomes.