Cow genome map


           Conread name:
           Ss1.1-rthg14_d21.5
        

               Conread position:
               1-231
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               1-271
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 121
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               21, 54
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 46
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               18, 38
               

               Conread position:
               1-294
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               18, 48
               

               Conread position:
               1-334
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               18, 39
               

               Conread position:
               1-692
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 30
               

               Conread position:
               1-698
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 281
               

               Conread position:
               1-869
               

               Cow position:
               
               

               Alignm length:
               913
               

               Alignm identity:
               593
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 18
               

               Conread position:
               1-870
               

               Cow position:
               
               

               Alignm length:
               946
               

               Alignm identity:
               631
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 137
               

               Conread position:
               2-268
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               17, 112
               

               Conread position:
               2-285
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               17, 210
               

               Conread position:
               3-241
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 192
               

               Conread position:
               3-267
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               16, 100
               

               Conread position:
               3-267
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               16, 121
               

               Conread position:
               3-267
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               16, 202
               

               Conread position:
               3-267
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               15, 78
               

               Conread position:
               3-267
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               16, 45
               

               Conread position:
               3-267
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               3-294
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 213
               

               Conread position:
               3-295
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               16, 50
               

               Conread position:
               3-298
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               5-287
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               5-295
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               279, 42
               

               Conread position:
               5-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 84
               

               Conread position:
               5-295
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 10
               

               Conread position:
               5-295
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               5-295
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               6-270
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               6-295
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               6-295
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               7-294
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 201
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               12, 145
               

               Conread position:
               10-265
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               10-267
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               10-267
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               10-292
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               10-295
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 227
               

               Conread position:
               10-295
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               17-267
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               103, 30
               

               Conread position:
               17-286
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               57, 34
               

               Conread position:
               17-295
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               18-225
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-252
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               104, 29
               

               Conread position:
               18-267
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               102, 169
               

               Conread position:
               18-295
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 65
               

               Conread position:
               19-294
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               265, 5
               

               Conread position:
               20-295
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               26-295
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               28-247
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               13, 136
               

               Conread position:
               33-267
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               33-294
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               176
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               62, 51
               

               Conread position:
               41-285
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               147, 0
               

               Conread position:
               42-222
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               42-296
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               43-285
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               41, 163
               

               Conread position:
               44-527
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               333
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               262, 81
               

               Conread position:
               77-295
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               89-295
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               104-285
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               289-742
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               325
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               55, 137
               

               Conread position:
               293-715
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               299
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               70, 134
               

               Conread position:
               293-742
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               327
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               59, 47
               

               Conread position:
               293-742
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               317
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               59, 47
               

               Conread position:
               293-742
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               315
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               59, 47
               

               Conread position:
               293-848
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               374
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 47
               

               Conread position:
               293-855
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               388
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               47, 86
               

               Conread position:
               349-852
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               371-856
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 177
               

               Conread position:
               372-730
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               249
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               38, 172
               

               Conread position:
               372-755
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               267
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               38, 123
               

               Conread position:
               377-855
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               320
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               33, 172
               

               Conread position:
               442-742
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               41, 99
               

               Conread position:
               442-748
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               41, 93
               

               Conread position:
               442-870
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               300
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               32, 88
               

               Conread position:
               443-692
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               38, 98
               

               Conread position:
               444-686
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 98
               

               Conread position:
               444-742
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 92
               

               Conread position:
               444-742
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               7, 92
               

               Conread position:
               446-752
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               37, 89
               

               Conread position:
               446-754
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               43, 95
               

               Conread position:
               446-869
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               295
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               41, 67
               

               Conread position:
               453-742
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               30, 82
               

               Conread position:
               455-754
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               29, 86
               

               Conread position:
               476-742
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               89, 52
               

               Conread position:
               514-913
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               280
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               53, 21
               

               Conread position:
               635-877
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               110, 59
               

               Conread position:
               660-871
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               102, 34
               
Show alignments to all cow chromosomes.