Cow genome map


           Conread name:
           Ss1.1-rthg14_d21.5
        

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               18, 26
               

               Conread position:
               1-231
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 63
               

               Conread position:
               1-245
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               1-267
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               18, 95
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               17, 185
               

               Conread position:
               1-285
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               18, 190
               

               Conread position:
               1-293
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               18, 78
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               17, 47
               

               Conread position:
               3-267
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               16, 82
               

               Conread position:
               3-295
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 87
               

               Conread position:
               3-295
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 50
               

               Conread position:
               3-295
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               5-225
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               14, 110
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 149
               

               Conread position:
               5-285
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               6-298
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               13, 112
               

               Conread position:
               7-295
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               10-295
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               9, 93
               

               Conread position:
               10-295
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               10-295
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               10-295
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               15-192
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               23, 6
               

               Conread position:
               18-213
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-267
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               18-285
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 95
               

               Conread position:
               18-294
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               24, 171
               

               Conread position:
               18-295
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 138
               

               Conread position:
               18-295
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-295
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-295
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               18-295
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               18-381
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               276, 21
               

               Conread position:
               18-381
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 333
               

               Conread position:
               19-295
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               20-252
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               20-295
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               22-285
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               32, 78
               

               Conread position:
               22-295
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               24-242
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               24-283
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               24-295
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               201
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               48, 39
               

               Conread position:
               25-295
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               163, 85
               

               Conread position:
               26-246
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               26-294
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               259, 0
               

               Conread position:
               26-856
               

               Cow position:
               
               

               Alignm length:
               864
               

               Alignm identity:
               577
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 105
               

               Conread position:
               33-285
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               61, 124
               

               Conread position:
               33-295
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               72, 6
               

               Conread position:
               41-225
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 61
               

               Conread position:
               41-237
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               43-270
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               47-267
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               53-294
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               56-228
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 67
               

               Conread position:
               77-267
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               90-285
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               108, 115
               

               Conread position:
               92-294
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               192, 0
               

               Conread position:
               98-252
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               101-285
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               101-298
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               103-221
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               127-295
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-730
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               316
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               59, 47
               

               Conread position:
               293-730
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               312
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               58, 119
               

               Conread position:
               293-757
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               326
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               47, 272
               

               Conread position:
               293-870
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               399
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               9, 260
               

               Conread position:
               296-862
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 62
               

               Conread position:
               363-871
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               330
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               47, 119
               

               Conread position:
               372-685
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 173
               

               Conread position:
               372-742
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               38, 187
               

               Conread position:
               374-736
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               36, 175
               

               Conread position:
               377-721
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               33, 172
               

               Conread position:
               377-742
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               33, 172
               

               Conread position:
               438-840
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 10
               

               Conread position:
               441-692
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               157, 26
               

               Conread position:
               441-871
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 62
               

               Conread position:
               442-871
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 110
               

               Conread position:
               444-710
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               7, 92
               

               Conread position:
               444-735
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               7, 257
               

               Conread position:
               444-736
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               197
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               7, 92
               

               Conread position:
               444-742
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               7, 105
               

               Conread position:
               444-742
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               7, 98
               

               Conread position:
               446-685
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 89
               

               Conread position:
               446-754
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               37, 68
               

               Conread position:
               448-732
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               29, 93
               

               Conread position:
               466-862
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               265
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               82, 64
               

               Conread position:
               514-866
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               42, 22
               

               Conread position:
               529-720
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 93
               

               Conread position:
               600-797
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               606-870
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               24, 92
               
Show alignments to all cow chromosomes.