Cow genome map


           Conread name:
           Ss1.1-rthg14_d21.5
        

               Conread position:
               1-272
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 80
               

               Conread position:
               1-272
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               1-281
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               203, 18
               

               Conread position:
               1-295
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               18, 86
               

               Conread position:
               2-253
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               19, 51
               

               Conread position:
               3-232
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               16, 221
               

               Conread position:
               3-277
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 67
               

               Conread position:
               3-283
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               7-269
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               8-295
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               10-267
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               9, 31
               

               Conread position:
               10-267
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               10-270
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               193
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               10-285
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               10-293
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               10-294
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               10-294
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               10-295
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               10-295
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 178
               

               Conread position:
               10-840
               

               Cow position:
               
               

               Alignm length:
               880
               

               Alignm identity:
               560
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 61
               

               Conread position:
               12-299
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               112, 58
               

               Conread position:
               15-245
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               17, 96
               

               Conread position:
               15-253
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 25
               

               Conread position:
               17-222
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               63, 31
               

               Conread position:
               17-249
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               106, 29
               

               Conread position:
               18-218
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               29, 132
               

               Conread position:
               18-267
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               34, 124
               

               Conread position:
               20-295
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               22, 57
               

               Conread position:
               26-251
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               168, 13
               

               Conread position:
               26-293
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               72, 167
               

               Conread position:
               41-295
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               47-295
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               156, 185
               

               Conread position:
               293-730
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               312
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 272
               

               Conread position:
               293-736
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               325
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               59, 47
               

               Conread position:
               296-869
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               385
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               126, 77
               

               Conread position:
               297-671
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               65, 254
               

               Conread position:
               372-742
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               38, 177
               

               Conread position:
               375-672
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 5
               

               Conread position:
               444-730
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 98
               

               Conread position:
               444-742
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               444-747
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               33, 93
               

               Conread position:
               450-866
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               301
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               33, 49
               

               Conread position:
               466-857
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               266
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               270, 51
               

               Conread position:
               536-869
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               18, 120
               

               Conread position:
               633-858
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               120, 66
               
Show alignments to all cow chromosomes.