Cow genome map
| Conread name: | Ss1.1-rthg14_d21.5 |
| Conread position: | 1-181 |
| Cow position: | chr7:24878753-24878927 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 1-185 |
| Cow position: | chr7:49829495-49829684 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-192 |
| Cow position: | chr7:39097380-39097571 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 140 |
| Conread position: | 1-209 |
| Cow position: | chr7:65337676-65337884 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 18, 93 |
| Conread position: | 1-267 |
| Cow position: | chr7:29368896-29369160 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 17, 112 |
| Conread position: | 1-271 |
| Cow position: | chr7:19990154-19989884 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 18, 55 |
| Conread position: | 1-283 |
| Cow position: | chr7:20784846-20785130 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 17, 135 |
| Conread position: | 1-285 |
| Cow position: | chr7:54643356-54643649 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-294 |
| Cow position: | chr7:27583597-27583885 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 31 |
| Conread position: | 1-294 |
| Cow position: | chr7:53358108-53358414 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 223 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 1-294 |
| Cow position: | chr7:57563970-57564262 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 219 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 18, 191 |
| Conread position: | 1-294 |
| Cow position: | chr7:67429700-67429401 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 1-295 |
| Cow position: | chr7:3156593-3156296 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 1-295 |
| Cow position: | chr7:15810332-15810626 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 107 |
| Conread position: | 1-295 |
| Cow position: | chr7:30118411-30118707 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 1-295 |
| Cow position: | chr7:51015388-51015097 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 17, 75 |
| Conread position: | 1-295 |
| Cow position: | chr7:58994711-58994426 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 1-295 |
| Cow position: | chr7:59138772-59138492 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 32 |
| Conread position: | 1-296 |
| Cow position: | chr7:67489830-67489536 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 115, 50 |
| Conread position: | 1-359 |
| Cow position: | chr7:33332686-33332332 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 1-393 |
| Cow position: | chr7:67676225-67675826 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 265 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 17, 112 |
| Conread position: | 1-691 |
| Cow position: | chr7:68334070-68333363 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 1-857 |
| Cow position: | chr7:67813633-67812770 (view UCSC Genome Browser custom track) |
| Alignm length: | 897 |
| Alignm identity: | 578 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 104 |
| Conread position: | 2-268 |
| Cow position: | chr7:23837697-23837432 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 2-295 |
| Cow position: | chr7:42871269-42870975 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 17, 255 |
| Conread position: | 2-295 |
| Cow position: | chr7:65458060-65458356 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 3-161 |
| Cow position: | chr7:19046614-19046767 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 3-225 |
| Cow position: | chr7:53407729-53407518 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 3-226 |
| Cow position: | chr7:41531915-41532129 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 3-266 |
| Cow position: | chr7:6721271-6721005 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-267 |
| Cow position: | chr7:11447685-11447419 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-267 |
| Cow position: | chr7:11462924-11463186 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 3-267 |
| Cow position: | chr7:20514651-20514916 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-267 |
| Cow position: | chr7:20798317-20798582 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 16, 64 |
| Conread position: | 3-294 |
| Cow position: | chr7:545971-545672 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 16, 71 |
| Conread position: | 3-294 |
| Cow position: | chr7:995645-995345 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 207 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 17, 79 |
| Conread position: | 3-295 |
| Cow position: | chr7:52803550-52803828 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 24 |
| Conread position: | 3-295 |
| Cow position: | chr7:63386859-63386559 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 16, 114 |
| Conread position: | 3-359 |
| Cow position: | chr7:3518201-3517857 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 234 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 353, 26 |
| Conread position: | 4-128 |
| Cow position: | chr7:1403335-1403460 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-283 |
| Cow position: | chr7:1371521-1371801 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 253 |
| Conread position: | 5-285 |
| Cow position: | chr7:14138472-14138754 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 5-295 |
| Cow position: | chr7:445228-445508 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 210 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 14, 29 |
| Conread position: | 5-295 |
| Cow position: | chr7:13532779-13533068 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 14, 183 |
| Conread position: | 6-295 |
| Cow position: | chr7:33405120-33405408 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 182 |
| Conread position: | 7-269 |
| Cow position: | chr7:10430302-10430565 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 7-295 |
| Cow position: | chr7:1452767-1452475 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 45, 77 |
| Conread position: | 7-295 |
| Cow position: | chr7:8144113-8144408 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 7-295 |
| Cow position: | chr7:27787750-27787467 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 208 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 12, 33 |
| Conread position: | 7-842 |
| Cow position: | chr7:67799944-67799075 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 68 |
| Conread position: | 9-285 |
| Cow position: | chr7:33759508-33759235 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 10-221 |
| Cow position: | chr7:52763399-52763183 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-232 |
| Cow position: | chr7:66905840-66905618 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 9, 179 |
| Conread position: | 10-238 |
| Cow position: | chr7:68438889-68438658 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 156 |
| Conread position: | 10-258 |
| Cow position: | chr7:5308996-5309244 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 10-267 |
| Cow position: | chr7:48805615-48805877 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-282 |
| Cow position: | chr7:20774216-20774487 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 9, 23 |
| Conread position: | 10-285 |
| Cow position: | chr7:34150424-34150149 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 9, 187 |
| Conread position: | 10-285 |
| Cow position: | chr7:46900964-46901231 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 10-295 |
| Cow position: | chr7:21986544-21986259 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 197 |
| Conread position: | 10-295 |
| Cow position: | chr7:39792888-39792602 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-295 |
| Cow position: | chr7:64239886-64240177 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 208 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 10-296 |
| Cow position: | chr7:29471577-29471286 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 120 |
| Conread position: | 11-229 |
| Cow position: | chr7:36841426-36841639 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 12-177 |
| Cow position: | chr7:20211951-20212117 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 5 |
| Conread position: | 12-295 |
| Cow position: | chr7:48635540-48635262 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 17-206 |
| Cow position: | chr7:53364630-53364817 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 96, 92 |
| Conread position: | 17-225 |
| Cow position: | chr7:26870565-26870365 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 17-236 |
| Cow position: | chr7:1338960-1339177 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 171, 99 |
| Conread position: | 17-293 |
| Cow position: | chr7:7210888-7211162 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 18-202 |
| Cow position: | chr7:41875164-41875353 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 71, 14 |
| Conread position: | 18-267 |
| Cow position: | chr7:15764-16014 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 18-267 |
| Cow position: | chr7:27101181-27101434 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 24, 119 |
| Conread position: | 18-283 |
| Cow position: | chr7:14214257-14214523 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 29 |
| Conread position: | 18-285 |
| Cow position: | chr7:55536817-55537079 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 18, 60 |
| Conread position: | 18-295 |
| Cow position: | chr7:526085-525808 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 47 |
| Conread position: | 18-295 |
| Cow position: | chr7:6580297-6580020 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-295 |
| Cow position: | chr7:21126553-21126830 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-295 |
| Cow position: | chr7:34487025-34486748 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-295 |
| Cow position: | chr7:38397924-38397647 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-295 |
| Cow position: | chr7:65811942-65811664 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 186 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 75, 63 |
| Conread position: | 18-295 |
| Cow position: | chr7:68481657-68481386 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 24, 149 |
| Conread position: | 18-548 |
| Cow position: | chr7:33311841-33312390 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 532 |
| Conread position: | 19-295 |
| Cow position: | chr7:21233900-21234181 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 23, 73 |
| Conread position: | 19-295 |
| Cow position: | chr7:45948029-45948309 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 23, 194 |
| Conread position: | 20-204 |
| Cow position: | chr7:27128463-27128277 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 20-267 |
| Cow position: | chr7:3300049-3300296 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-184 |
| Cow position: | chr7:25251251-25251088 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 22-221 |
| Cow position: | chr7:58376772-58376968 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 94, 17 |
| Conread position: | 22-258 |
| Cow position: | chr7:1609539-1609776 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 24-295 |
| Cow position: | chr7:54670969-54671249 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 68, 147 |
| Conread position: | 26-298 |
| Cow position: | chr7:27348575-27348848 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 236, 256 |
| Conread position: | 27-160 |
| Cow position: | chr7:29733987-29734119 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 28-294 |
| Cow position: | chr7:59679946-59679677 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 65, 54 |
| Conread position: | 28-294 |
| Cow position: | chr7:67495210-67494943 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 205 |
| Conread position: | 31-307 |
| Cow position: | chr7:7293569-7293841 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 33-295 |
| Cow position: | chr7:21852731-21852999 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 50, 6 |
| Conread position: | 34-187 |
| Cow position: | chr7:32727216-32727364 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 34-267 |
| Cow position: | chr7:7258266-7258034 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 39-627 |
| Cow position: | chr7:39554387-39555014 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 406 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 80, 526 |
| Conread position: | 41-295 |
| Cow position: | chr7:6647570-6647825 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 41-295 |
| Cow position: | chr7:24807371-24807623 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 41-295 |
| Cow position: | chr7:25440584-25440342 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 41-295 |
| Cow position: | chr7:49604838-49604583 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 41-295 |
| Cow position: | chr7:61578541-61578287 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 42-277 |
| Cow position: | chr7:20533045-20532813 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 129, 19 |
| Conread position: | 45-239 |
| Cow position: | chr7:40124441-40124245 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 55 |
| Conread position: | 50-250 |
| Cow position: | chr7:22187488-22187689 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 43, 11 |
| Conread position: | 53-242 |
| Cow position: | chr7:5663628-5663435 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 97, 169 |
| Conread position: | 57-285 |
| Cow position: | chr7:14255695-14255468 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 202, 91 |
| Conread position: | 60-285 |
| Cow position: | chr7:44910418-44910635 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 66-359 |
| Cow position: | chr7:54786322-54786613 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 138, 45 |
| Conread position: | 69-301 |
| Cow position: | chr7:60794239-60794476 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 89-283 |
| Cow position: | chr7:24058481-24058285 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 91-202 |
| Cow position: | chr7:63950016-63950126 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 94 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 118-285 |
| Cow position: | chr7:59684190-59684026 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 162, 92 |
| Conread position: | 121-548 |
| Cow position: | chr7:40268988-40269425 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 294 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 121, 272 |
| Conread position: | 143-265 |
| Cow position: | chr7:54698186-54698066 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 98 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 196-381 |
| Cow position: | chr7:1403655-1403462 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 293-685 |
| Cow position: | chr7:60794490-60794926 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 290 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 65, 47 |
| Conread position: | 293-757 |
| Cow position: | chr7:6647846-6648350 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 327 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 293-869 |
| Cow position: | chr7:51015076-51014466 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 144 |
| Conread position: | 294-785 |
| Cow position: | chr7:27583907-27584440 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 359 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 59, 46 |
| Conread position: | 295-864 |
| Cow position: | chr7:20304682-20305295 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 411 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 39, 261 |
| Conread position: | 350-632 |
| Cow position: | chr7:3155988-3155680 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 211 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 23, 208 |
| Conread position: | 372-715 |
| Cow position: | chr7:65811549-65811194 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 173 |
| Conread position: | 372-730 |
| Cow position: | chr7:60463865-60463481 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 38, 183 |
| Conread position: | 372-842 |
| Cow position: | chr7:25440226-25439730 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 317 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 38, 177 |
| Conread position: | 374-730 |
| Cow position: | chr7:61559927-61559545 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 251 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 36, 175 |
| Conread position: | 377-730 |
| Cow position: | chr7:61808943-61808564 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 247 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 172 |
| Conread position: | 389-869 |
| Cow position: | chr7:58377072-58377570 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 337 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 390-852 |
| Cow position: | chr7:41875574-41876045 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 67 |
| Conread position: | 404-809 |
| Cow position: | chr7:33072608-33073024 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 8, 23 |
| Conread position: | 422-862 |
| Cow position: | chr7:20821363-20820924 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 38 |
| Conread position: | 438-856 |
| Cow position: | chr7:63950785-63951206 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 293 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 46, 10 |
| Conread position: | 442-793 |
| Cow position: | chr7:7294032-7294385 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 250 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 33, 93 |
| Conread position: | 442-852 |
| Cow position: | chr7:1403970-1404380 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 298 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 41, 99 |
| Conread position: | 444-730 |
| Cow position: | chr7:21320787-21320488 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 201 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 7, 92 |
| Conread position: | 444-742 |
| Cow position: | chr7:3234056-3234363 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 7, 60 |
| Conread position: | 444-742 |
| Cow position: | chr7:11447188-11446876 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 7, 98 |
| Conread position: | 444-742 |
| Cow position: | chr7:20515142-20515452 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 7, 26 |
| Conread position: | 446-679 |
| Cow position: | chr7:63386366-63386122 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 37, 66 |
| Conread position: | 446-685 |
| Cow position: | chr7:525606-525353 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 36, 89 |
| Conread position: | 446-864 |
| Cow position: | chr7:29471085-29470671 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 36, 85 |
| Conread position: | 448-857 |
| Cow position: | chr7:26852296-26851894 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 297 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 35, 85 |
| Conread position: | 450-754 |
| Cow position: | chr7:21986032-21985715 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 33, 84 |
| Conread position: | 450-783 |
| Cow position: | chr7:30303205-30302879 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 89 |
| Conread position: | 452-672 |
| Cow position: | chr7:6489814-6489582 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 31, 89 |
| Conread position: | 452-730 |
| Cow position: | chr7:16251-16540 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 31, 83 |
| Conread position: | 476-745 |
| Cow position: | chr7:65338687-65338945 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 124, 22 |
| Conread position: | 476-881 |
| Cow position: | chr7:23837162-23836729 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 296 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 83, 49 |
| Conread position: | 481-715 |
| Cow position: | chr7:38536992-38536751 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 85, 55 |
| Conread position: | 614-852 |
| Cow position: | chr7:19048090-19048329 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 15, 109 |
| Conread position: | 631-866 |
| Cow position: | chr7:40269535-40269776 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 104, 38 |
| Conread position: | 633-847 |
| Cow position: | chr7:59028816-59028613 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 12, 61 |
| Conread position: | 671-860 |
| Cow position: | chr7:59137232-59137046 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 133, 25 |
| Conread position: | 675-823 |
| Cow position: | chr7:32728282-32728434 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 680-871 |
| Cow position: | chr7:25102845-25102656 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 93, 14 |
| Conread position: | 695-857 |
| Cow position: | chr7:57564594-57564753 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
Show alignments to all cow chromosomes.