Cow genome map
| Conread name: | Ss1.1-rthg14_d21.5 |
| Conread position: | 1-203 |
| Cow position: | chr9:50698268-50698069 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 16, 189 |
| Conread position: | 1-222 |
| Cow position: | chr9:6977297-6977081 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 17, 31 |
| Conread position: | 1-285 |
| Cow position: | chr9:3936470-3936763 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 220 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 26 |
| Conread position: | 1-293 |
| Cow position: | chr9:9328925-9329216 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 198 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 71, 16 |
| Conread position: | 1-294 |
| Cow position: | chr9:34722868-34722573 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 143, 13 |
| Conread position: | 1-294 |
| Cow position: | chr9:43664759-43664472 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 1-294 |
| Cow position: | chr9:54925518-54925224 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 209 |
| Conread position: | 1-295 |
| Cow position: | chr9:828166-828464 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 18, 295 |
| Conread position: | 1-295 |
| Cow position: | chr9:1981240-1980943 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-295 |
| Cow position: | chr9:3763965-3763675 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 1-295 |
| Cow position: | chr9:4649633-4649923 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 18, 110 |
| Conread position: | 1-295 |
| Cow position: | chr9:5515384-5515090 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 18, 86 |
| Conread position: | 1-295 |
| Cow position: | chr9:22432242-22431948 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 1-295 |
| Cow position: | chr9:25188064-25187779 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 215 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 15, 48 |
| Conread position: | 1-295 |
| Cow position: | chr9:50729173-50729461 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 1-297 |
| Cow position: | chr9:26102132-26102421 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 221 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 283, 18 |
| Conread position: | 1-706 |
| Cow position: | chr9:3167892-3167156 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 51 |
| Conread position: | 1-853 |
| Cow position: | chr9:29329602-29328715 (view UCSC Genome Browser custom track) |
| Alignm length: | 908 |
| Alignm identity: | 594 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 264 |
| Conread position: | 2-193 |
| Cow position: | chr9:3963164-3963353 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 17, 111 |
| Conread position: | 2-210 |
| Cow position: | chr9:30435536-30435326 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 24 |
| Conread position: | 2-257 |
| Cow position: | chr9:28696423-28696172 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 2-293 |
| Cow position: | chr9:25633048-25633332 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 2-293 |
| Cow position: | chr9:35315915-35316192 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 3-206 |
| Cow position: | chr9:52292368-52292171 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 97 |
| Conread position: | 3-220 |
| Cow position: | chr9:3727565-3727343 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 16, 137 |
| Conread position: | 3-226 |
| Cow position: | chr9:32296283-32296501 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 3-267 |
| Cow position: | chr9:28678935-28678669 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-267 |
| Cow position: | chr9:50791676-50791411 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 16, 204 |
| Conread position: | 3-270 |
| Cow position: | chr9:17063419-17063693 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-295 |
| Cow position: | chr9:4942844-4943140 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 198 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 16, 45 |
| Conread position: | 3-295 |
| Cow position: | chr9:25903472-25903181 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 37 |
| Conread position: | 3-865 |
| Cow position: | chr9:9647085-9646223 (view UCSC Genome Browser custom track) |
| Alignm length: | 893 |
| Alignm identity: | 549 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 19, 108 |
| Conread position: | 5-225 |
| Cow position: | chr9:7016842-7016625 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 51 |
| Conread position: | 5-285 |
| Cow position: | chr9:29027250-29027527 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 5-286 |
| Cow position: | chr9:7061119-7061401 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 108 |
| Conread position: | 5-295 |
| Cow position: | chr9:9014059-9013772 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 14, 109 |
| Conread position: | 5-295 |
| Cow position: | chr9:10322764-10322475 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 5-295 |
| Cow position: | chr9:16176733-16176443 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 232 |
| Conread position: | 5-295 |
| Cow position: | chr9:17305015-17305306 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 5-295 |
| Cow position: | chr9:29627789-29628078 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 204 |
| Conread position: | 5-295 |
| Cow position: | chr9:59481835-59482120 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 80 |
| Conread position: | 6-295 |
| Cow position: | chr9:28022766-28022475 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 100 |
| Conread position: | 7-281 |
| Cow position: | chr9:30673329-30673051 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 202 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 12, 44 |
| Conread position: | 7-285 |
| Cow position: | chr9:37161854-37162132 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 45 |
| Conread position: | 7-291 |
| Cow position: | chr9:5004931-5004646 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 205 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 7-295 |
| Cow position: | chr9:3543821-3543532 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 12, 208 |
| Conread position: | 7-295 |
| Cow position: | chr9:10937554-10937268 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 12, 181 |
| Conread position: | 7-295 |
| Cow position: | chr9:22654535-22654244 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 12, 252 |
| Conread position: | 7-295 |
| Cow position: | chr9:59537057-59536768 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 7-743 |
| Cow position: | chr9:45874297-45873505 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 436 |
| Conread position: | 7-869 |
| Cow position: | chr9:44819107-44818230 (view UCSC Genome Browser custom track) |
| Alignm length: | 906 |
| Alignm identity: | 588 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 132 |
| Conread position: | 8-381 |
| Cow position: | chr9:18508859-18509236 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 30 |
| Conread position: | 9-195 |
| Cow position: | chr9:27783144-27782952 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 9-198 |
| Cow position: | chr9:2888180-2888364 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 10, 23 |
| Conread position: | 10-231 |
| Cow position: | chr9:21410253-21410028 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-265 |
| Cow position: | chr9:62380886-62380633 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 10-268 |
| Cow position: | chr9:8165924-8166190 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 193 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-285 |
| Cow position: | chr9:47003151-47002874 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-295 |
| Cow position: | chr9:6250255-6249971 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 137 |
| Conread position: | 10-295 |
| Cow position: | chr9:31808533-31808253 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 204 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 9, 122 |
| Conread position: | 10-295 |
| Cow position: | chr9:32969904-32969622 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 177 |
| Conread position: | 10-295 |
| Cow position: | chr9:37970239-37970525 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 14-295 |
| Cow position: | chr9:27035634-27035354 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 15-294 |
| Cow position: | chr9:28655303-28655022 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 67, 175 |
| Conread position: | 17-285 |
| Cow position: | chr9:33243378-33243657 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 17-287 |
| Cow position: | chr9:39731110-39731375 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 93 |
| Conread position: | 17-295 |
| Cow position: | chr9:60277067-60277344 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 17-862 |
| Cow position: | chr9:12121897-12121045 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 539 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 18-225 |
| Cow position: | chr9:16629721-16629928 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-242 |
| Cow position: | chr9:9825099-9824875 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-267 |
| Cow position: | chr9:1075267-1075518 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 102, 171 |
| Conread position: | 18-267 |
| Cow position: | chr9:64015694-64015942 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 18-269 |
| Cow position: | chr9:42310626-42310380 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 18-295 |
| Cow position: | chr9:779862-780134 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 18-295 |
| Cow position: | chr9:3148324-3148600 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 18-295 |
| Cow position: | chr9:4533436-4533166 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 201 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 18-295 |
| Cow position: | chr9:25034763-25035041 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 18-295 |
| Cow position: | chr9:28440756-28440479 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-295 |
| Cow position: | chr9:51211628-51211351 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 192 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 19-285 |
| Cow position: | chr9:51181231-51181504 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 196 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 20-295 |
| Cow position: | chr9:31065663-31065390 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 49, 58 |
| Conread position: | 20-381 |
| Cow position: | chr9:2171999-2171622 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 21-281 |
| Cow position: | chr9:13474847-13475101 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 22-222 |
| Cow position: | chr9:64120161-64119967 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 122 |
| Conread position: | 22-283 |
| Cow position: | chr9:20308206-20308469 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 12, 66 |
| Conread position: | 22-285 |
| Cow position: | chr9:651071-651333 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 22, 166 |
| Conread position: | 22-294 |
| Cow position: | chr9:2186813-2186546 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 148 |
| Conread position: | 24-231 |
| Cow position: | chr9:24980978-24981184 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 24-295 |
| Cow position: | chr9:2053688-2053433 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 24-371 |
| Cow position: | chr9:2867045-2867406 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 202, 14 |
| Conread position: | 25-285 |
| Cow position: | chr9:2210231-2209974 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 26-281 |
| Cow position: | chr9:9706481-9706232 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 90, 25 |
| Conread position: | 29-296 |
| Cow position: | chr9:2476695-2476429 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 250, 0 |
| Conread position: | 33-205 |
| Cow position: | chr9:4282905-4282738 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 33-208 |
| Cow position: | chr9:19009156-19009329 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 40-225 |
| Cow position: | chr9:3804465-3804285 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 41-211 |
| Cow position: | chr9:2482754-2482577 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 52, 174 |
| Conread position: | 41-266 |
| Cow position: | chr9:3005326-3005547 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 205, 186 |
| Conread position: | 41-267 |
| Cow position: | chr9:27935304-27935079 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 41-291 |
| Cow position: | chr9:7003724-7003480 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 41-295 |
| Cow position: | chr9:221599-221857 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 53-252 |
| Cow position: | chr9:2492183-2492378 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 148, 48 |
| Conread position: | 53-269 |
| Cow position: | chr9:239580-239796 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 133, 26 |
| Conread position: | 62-295 |
| Cow position: | chr9:42569807-42569576 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 69-272 |
| Cow position: | chr9:8096272-8096079 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 77-295 |
| Cow position: | chr9:59173259-59173474 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 78-270 |
| Cow position: | chr9:6829430-6829619 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 89-212 |
| Cow position: | chr9:1637261-1637140 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 89-293 |
| Cow position: | chr9:8402404-8402203 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 89-294 |
| Cow position: | chr9:26083648-26083855 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 293-685 |
| Cow position: | chr9:50791362-50790929 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 287 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 293-703 |
| Cow position: | chr9:53702082-53702520 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 216 |
| Conread position: | 293-730 |
| Cow position: | chr9:51211330-51210853 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 312 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 37, 270 |
| Conread position: | 293-742 |
| Cow position: | chr9:780155-780645 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 271 |
| Conread position: | 293-742 |
| Cow position: | chr9:1251347-1251835 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 318 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 47 |
| Conread position: | 293-869 |
| Cow position: | chr9:59426420-59425795 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 232 |
| Conread position: | 301-742 |
| Cow position: | chr9:1075574-1076038 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 299 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 61, 39 |
| Conread position: | 371-852 |
| Cow position: | chr9:3936880-3937369 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 120 |
| Conread position: | 372-736 |
| Cow position: | chr9:31064988-31064597 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 261 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 38, 177 |
| Conread position: | 372-855 |
| Cow position: | chr9:3005692-3006195 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 324 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 142 |
| Conread position: | 372-869 |
| Cow position: | chr9:28688659-28688125 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 346 |
| Conread position: | 374-714 |
| Cow position: | chr9:28440361-28439996 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 36, 175 |
| Conread position: | 378-840 |
| Cow position: | chr9:3393063-3393545 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 336 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 34, 174 |
| Conread position: | 383-834 |
| Cow position: | chr9:37096066-37095600 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 168 |
| Conread position: | 383-865 |
| Cow position: | chr9:64119762-64119272 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 324 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 29, 169 |
| Conread position: | 442-754 |
| Cow position: | chr9:47002667-47002344 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 99 |
| Conread position: | 442-877 |
| Cow position: | chr9:42556399-42555950 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 100 |
| Conread position: | 443-855 |
| Cow position: | chr9:36724973-36724552 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 8, 106 |
| Conread position: | 444-730 |
| Cow position: | chr9:49177357-49177656 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 7, 92 |
| Conread position: | 444-736 |
| Cow position: | chr9:27934558-27934254 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 200 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 7, 99 |
| Conread position: | 444-741 |
| Cow position: | chr9:17063917-17064223 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 7, 98 |
| Conread position: | 444-742 |
| Cow position: | chr9:25035375-25035686 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 7, 98 |
| Conread position: | 444-742 |
| Cow position: | chr9:28678443-28678132 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 7, 92 |
| Conread position: | 444-743 |
| Cow position: | chr9:64017991-64018303 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 7, 98 |
| Conread position: | 444-784 |
| Cow position: | chr9:42569375-42569023 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 240 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 39, 78 |
| Conread position: | 446-696 |
| Cow position: | chr9:59454798-59455055 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 31, 51 |
| Conread position: | 446-754 |
| Cow position: | chr9:1980458-1980139 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 89 |
| Conread position: | 446-754 |
| Cow position: | chr9:10322273-10321963 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 215 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 35, 88 |
| Conread position: | 446-862 |
| Cow position: | chr9:13476413-13476846 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 284 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 31, 87 |
| Conread position: | 449-876 |
| Cow position: | chr9:30488038-30487582 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 299 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 451-866 |
| Cow position: | chr9:249617-250028 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 281 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 27, 93 |
| Conread position: | 455-741 |
| Cow position: | chr9:130730-131029 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 28, 80 |
| Conread position: | 455-842 |
| Cow position: | chr9:222070-222465 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 26, 80 |
| Conread position: | 456-745 |
| Cow position: | chr9:37970751-37971047 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 21, 74 |
| Conread position: | 457-856 |
| Cow position: | chr9:52291872-52291462 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 267 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 172, 37 |
| Conread position: | 499-871 |
| Cow position: | chr9:7013122-7012752 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 260 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 500-869 |
| Cow position: | chr9:3354270-3354646 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 43 |
| Conread position: | 600-857 |
| Cow position: | chr9:63854885-63854623 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 12, 92 |
| Conread position: | 600-871 |
| Cow position: | chr9:2476210-2475933 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 144, 21 |
| Conread position: | 661-856 |
| Cow position: | chr9:6110308-6110505 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 60, 33 |
| Conread position: | 693-885 |
| Cow position: | chr9:43663772-43663582 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 74, 107 |
Show alignments to all cow chromosomes.