Cow genome map
| Conread name: | Ss1.1-rthg15_j20.5 |
| Conread position: | 1-453 |
| Cow position: | chr13:24162464-24162916 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 182, 157 |
| Conread position: | 1-481 |
| Cow position: | chr13:22124738-22125218 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 336, 325 |
| Conread position: | 7-498 |
| Cow position: | chr13:22124826-22125319 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 274 |
| Conread position: | 8-523 |
| Cow position: | chr13:39984388-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 225 |
| Conread position: | 8-541 |
| Cow position: | chr13:56292287-56291762 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 331 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 8-566 |
| Cow position: | chr13:39984136-39984694 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 344 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 232, 216 |
| Conread position: | 11-541 |
| Cow position: | chr13:39984055-39984585 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 328 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 160, 154 |
| Conread position: | 11-566 |
| Cow position: | chr13:39984223-39984778 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 315 |
| Conread position: | 14-453 |
| Cow position: | chr13:39930722-39931159 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 156 |
| Conread position: | 14-481 |
| Cow position: | chr13:24162897-24163364 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 274 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 94, 81 |
| Conread position: | 14-487 |
| Cow position: | chr13:39930638-39931111 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 147 |
| Conread position: | 14-498 |
| Cow position: | chr13:22125003-22125487 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 297 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 63, 93 |
| Conread position: | 14-498 |
| Cow position: | chr13:24162729-24163213 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 297 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 63, 81 |
| Conread position: | 14-541 |
| Cow position: | chr13:39983974-39984501 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 324 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 292, 301 |
| Conread position: | 20-541 |
| Cow position: | chr13:39984316-39984837 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 213 |
| Conread position: | 35-399 |
| Cow position: | chr13:24162414-24162778 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 35-498 |
| Cow position: | chr13:22124688-22125151 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 287 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 18 |
| Conread position: | 44-538 |
| Cow position: | chr13:39930584-39931078 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 305 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 107, 117 |
| Conread position: | 59-483 |
| Cow position: | chr13:56317298-56317714 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 265 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 25, 18 |
| Conread position: | 71-396 |
| Cow position: | chr13:56333679-56334004 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 258, 244 |
| Conread position: | 85-391 |
| Cow position: | chr13:56317929-56318235 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 64 |
| Conread position: | 85-480 |
| Cow position: | chr13:56333609-56334004 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 317, 302 |
| Conread position: | 98-566 |
| Cow position: | chr13:39983974-39984442 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 143, 154 |
| Conread position: | 117-483 |
| Cow position: | chr13:22124686-22125052 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 209, 220 |
| Conread position: | 117-483 |
| Cow position: | chr13:24162412-24162778 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 220, 214 |
| Conread position: | 117-538 |
| Cow position: | chr13:39930573-39930994 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 66, 47 |
| Conread position: | 170-540 |
| Cow position: | chr13:56333610-56333980 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 74, 66 |
Show alignments to all cow chromosomes.