Cow genome map
| Conread name: | Ss1.1-rthg15_j20.5 |
| Conread position: | 1-529 |
| Cow position: | chr14:25836699-25837227 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-540 |
| Cow position: | chr14:25876803-25877342 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-541 |
| Cow position: | chr14:25859500-25860040 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 169 |
| Conread position: | 1-568 |
| Cow position: | chr14:25859668-25860235 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 56 |
| Conread position: | 1-568 |
| Cow position: | chr14:25876551-25877118 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 504, 496 |
| Conread position: | 1-569 |
| Cow position: | chr14:25835691-25836259 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 418, 422 |
| Conread position: | 1-569 |
| Cow position: | chr14:25836531-25837099 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 546, 551 |
| Conread position: | 1-599 |
| Cow position: | chr14:25860256-25860853 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 568, 534 |
| Conread position: | 1-600 |
| Cow position: | chr14:25877307-25877907 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 568, 0 |
| Conread position: | 2-351 |
| Cow position: | chr14:447906-448255 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 211 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-436 |
| Cow position: | chr14:433959-434393 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 273 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 85, 75 |
| Conread position: | 2-496 |
| Cow position: | chr14:3127789-3127295 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 349, 345 |
| Conread position: | 2-541 |
| Cow position: | chr14:25895431-25895970 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 504, 498 |
| Conread position: | 2-567 |
| Cow position: | chr14:3080445-3079880 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 414 |
| Conread position: | 2-568 |
| Cow position: | chr14:25836280-25836846 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 551, 544 |
| Conread position: | 4-569 |
| Cow position: | chr14:25910733-25911295 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 57 |
| Conread position: | 7-297 |
| Cow position: | chr14:420629-420917 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 268, 0 |
| Conread position: | 7-498 |
| Cow position: | chr14:680291-680784 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 302 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 7-567 |
| Cow position: | chr14:3080778-3080216 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 169 |
| Conread position: | 8-352 |
| Cow position: | chr14:3127615-3127271 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 8-361 |
| Cow position: | chr14:3080019-3079666 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 163, 156 |
| Conread position: | 8-396 |
| Cow position: | chr14:25784339-25784727 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 228, 243 |
| Conread position: | 8-398 |
| Cow position: | chr14:680882-681272 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 249 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-435 |
| Cow position: | chr14:447828-448255 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 69, 87 |
| Conread position: | 8-438 |
| Cow position: | chr14:3156053-3156483 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 271 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-474 |
| Cow position: | chr14:680546-681012 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 297 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 72, 86 |
| Conread position: | 8-480 |
| Cow position: | chr14:3127951-3127480 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 156 |
| Conread position: | 8-492 |
| Cow position: | chr14:3101432-3100952 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 295 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 58, 69 |
| Conread position: | 8-495 |
| Cow position: | chr14:25836454-25836941 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 367 |
| Conread position: | 8-532 |
| Cow position: | chr14:25794691-25794166 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 319 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 353, 409 |
| Conread position: | 8-536 |
| Cow position: | chr14:25794859-25794331 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 144 |
| Conread position: | 8-537 |
| Cow position: | chr14:680714-681243 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 329 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 162, 150 |
| Conread position: | 8-537 |
| Cow position: | chr14:25895101-25895630 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 43 |
| Conread position: | 8-538 |
| Cow position: | chr14:447576-448106 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 337 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 82 |
| Conread position: | 8-538 |
| Cow position: | chr14:3061586-3061056 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 318 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 79, 72 |
| Conread position: | 8-538 |
| Cow position: | chr14:25859339-25859869 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 159 |
| Conread position: | 8-538 |
| Cow position: | chr14:25876390-25876920 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 161 |
| Conread position: | 8-541 |
| Cow position: | chr14:3156137-3156661 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 331 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 411, 364 |
| Conread position: | 8-541 |
| Cow position: | chr14:25784003-25784536 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 245 |
| Conread position: | 8-541 |
| Cow position: | chr14:25784171-25784704 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 55 |
| Conread position: | 8-541 |
| Cow position: | chr14:25795447-25794914 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 333 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 151, 142 |
| Conread position: | 8-541 |
| Cow position: | chr14:25835866-25836399 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-541 |
| Cow position: | chr14:25876642-25877175 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 222 |
| Conread position: | 8-541 |
| Cow position: | chr14:25876978-25877511 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-565 |
| Cow position: | chr14:3127867-3127310 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 87 |
| Conread position: | 8-567 |
| Cow position: | chr14:25836118-25836677 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 223 |
| Conread position: | 8-568 |
| Cow position: | chr14:25783499-25784059 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 414, 408 |
| Conread position: | 8-568 |
| Cow position: | chr14:25835950-25836510 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-568 |
| Cow position: | chr14:25859843-25860403 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 151 |
| Conread position: | 8-568 |
| Cow position: | chr14:25876726-25877286 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 539, 526 |
| Conread position: | 8-569 |
| Cow position: | chr14:25783415-25783976 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 414, 408 |
| Conread position: | 8-569 |
| Cow position: | chr14:25783583-25784144 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 161 |
| Conread position: | 8-569 |
| Cow position: | chr14:25836622-25837183 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 223 |
| Conread position: | 9-482 |
| Cow position: | chr14:3128118-3127645 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 155 |
| Conread position: | 9-542 |
| Cow position: | chr14:25859928-25860460 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 521, 0 |
| Conread position: | 9-560 |
| Cow position: | chr14:25876895-25877446 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 542, 521 |
| Conread position: | 9-568 |
| Cow position: | chr14:25836203-25836762 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-568 |
| Cow position: | chr14:25895606-25896165 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 538, 543 |
| Conread position: | 9-568 |
| Cow position: | chr14:25895774-25896333 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 320 |
| Conread position: | 10-537 |
| Cow position: | chr14:25836372-25836899 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 453, 457 |
| Conread position: | 10-541 |
| Cow position: | chr14:25783669-25784200 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 239 |
| Conread position: | 10-541 |
| Cow position: | chr14:25783753-25784284 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-541 |
| Cow position: | chr14:25784089-25784620 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 452, 458 |
| Conread position: | 10-541 |
| Cow position: | chr14:25795193-25794662 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 329 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 137, 148 |
| Conread position: | 10-541 |
| Cow position: | chr14:25859173-25859704 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-541 |
| Cow position: | chr14:25859257-25859788 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-568 |
| Cow position: | chr14:25783837-25784395 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 76 |
| Conread position: | 11-459 |
| Cow position: | chr14:447663-448111 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 288 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 150, 158 |
| Conread position: | 11-481 |
| Cow position: | chr14:433884-434354 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 290 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 52, 73 |
| Conread position: | 11-482 |
| Cow position: | chr14:680801-681272 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 76, 66 |
| Conread position: | 11-537 |
| Cow position: | chr14:3080268-3079742 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 153 |
| Conread position: | 11-568 |
| Cow position: | chr14:25895692-25896249 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 315 |
| Conread position: | 11-569 |
| Cow position: | chr14:25860182-25860740 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 318 |
| Conread position: | 11-569 |
| Cow position: | chr14:25877233-25877791 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 318 |
| Conread position: | 12-399 |
| Cow position: | chr14:3080099-3079712 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 152 |
| Conread position: | 12-481 |
| Cow position: | chr14:680466-680935 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 295 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 159, 152 |
| Conread position: | 12-519 |
| Cow position: | chr14:3080519-3080012 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 152 |
| Conread position: | 12-537 |
| Cow position: | chr14:680634-681159 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 319 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 158, 152 |
| Conread position: | 12-540 |
| Cow position: | chr14:25859763-25860291 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 238 |
| Conread position: | 12-558 |
| Cow position: | chr14:25895525-25896071 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 153 |
| Conread position: | 12-567 |
| Cow position: | chr14:3080603-3080048 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 65 |
| Conread position: | 12-567 |
| Cow position: | chr14:25859427-25859982 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 541, 537 |
| Conread position: | 12-567 |
| Cow position: | chr14:25876478-25877033 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 535, 540 |
| Conread position: | 12-567 |
| Cow position: | chr14:25895189-25895744 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 539, 522 |
| Conread position: | 12-567 |
| Cow position: | chr14:25895357-25895912 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 12-568 |
| Cow position: | chr14:25860015-25860571 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 541, 536 |
| Conread position: | 12-568 |
| Cow position: | chr14:25877066-25877622 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 541, 536 |
| Conread position: | 12-568 |
| Cow position: | chr14:25895273-25895829 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 219 |
| Conread position: | 12-568 |
| Cow position: | chr14:25895861-25896415 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 242 |
| Conread position: | 13-531 |
| Cow position: | chr14:3080854-3080336 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 81 |
| Conread position: | 13-537 |
| Cow position: | chr14:25894938-25895462 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 50 |
| Conread position: | 13-568 |
| Cow position: | chr14:25860100-25860655 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 217 |
| Conread position: | 13-568 |
| Cow position: | chr14:25877151-25877706 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 383, 408 |
| Conread position: | 14-484 |
| Cow position: | chr14:3100844-3100374 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 299 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 74, 70 |
| Conread position: | 14-495 |
| Cow position: | chr14:3080181-3079700 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 39 |
| Conread position: | 14-527 |
| Cow position: | chr14:3155975-3156488 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 66 |
| Conread position: | 14-531 |
| Cow position: | chr14:25895023-25895540 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 146 |
| Conread position: | 14-538 |
| Cow position: | chr14:680384-680908 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 322 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 323, 312 |
| Conread position: | 14-538 |
| Cow position: | chr14:25795273-25794749 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 402, 409 |
| Conread position: | 14-567 |
| Cow position: | chr14:3080937-3080384 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 51 |
| Conread position: | 14-569 |
| Cow position: | chr14:25783925-25784480 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 16-568 |
| Cow position: | chr14:25835790-25836342 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 531, 546 |
| Conread position: | 20-447 |
| Cow position: | chr14:3155408-3155835 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 318 |
| Conread position: | 20-483 |
| Cow position: | chr14:3061742-3061279 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 293 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 20-483 |
| Cow position: | chr14:3101085-3100627 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 281 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 320, 25 |
| Conread position: | 20-528 |
| Cow position: | chr14:680222-680730 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 385, 409 |
| Conread position: | 20-541 |
| Cow position: | chr14:25794763-25794241 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 425, 0 |
| Conread position: | 20-541 |
| Cow position: | chr14:25795015-25794494 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 60 |
| Conread position: | 22-538 |
| Cow position: | chr14:25783345-25783861 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 81 |
| Conread position: | 22-569 |
| Cow position: | chr14:25835629-25836175 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 15 |
| Conread position: | 23-559 |
| Cow position: | chr14:25836049-25836586 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 524, 0 |
| Conread position: | 23-567 |
| Cow position: | chr14:3155900-3156444 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 51 |
| Conread position: | 25-476 |
| Cow position: | chr14:25795094-25794643 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 289 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 63, 52 |
| Conread position: | 28-568 |
| Cow position: | chr14:3128348-3127811 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 338 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 32-541 |
| Cow position: | chr14:3128179-3127670 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 306, 294 |
| Conread position: | 38-558 |
| Cow position: | chr14:25876336-25876856 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 82 |
| Conread position: | 70-540 |
| Cow position: | chr14:25894830-25895297 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 305 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 45, 50 |
| Conread position: | 76-568 |
| Cow position: | chr14:25783315-25783807 (view UCSC Genome Browser custom track) |
| Alignm length: | 496 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 62 |
| Conread position: | 83-567 |
| Cow position: | chr14:3155876-3156360 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 299 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 470, 466 |
| Conread position: | 85-498 |
| Cow position: | chr14:680203-680616 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 86-538 |
| Cow position: | chr14:433791-434243 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 250, 243 |
| Conread position: | 86-538 |
| Cow position: | chr14:447570-448022 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 294 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 78, 86 |
| Conread position: | 86-539 |
| Cow position: | chr14:25795453-25795000 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 269 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 144, 150 |
| Conread position: | 92-342 |
| Cow position: | chr14:420630-420877 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 73, 89 |
| Conread position: | 93-536 |
| Cow position: | chr14:3081026-3080583 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 98-568 |
| Cow position: | chr14:3100844-3100374 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 290 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 74, 66 |
| Conread position: | 98-568 |
| Cow position: | chr14:25876228-25876698 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 61 |
| Conread position: | 99-568 |
| Cow position: | chr14:25910584-25911042 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 451, 141 |
| Conread position: | 103-531 |
| Cow position: | chr14:3155407-3155835 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 212 |
| Conread position: | 128-483 |
| Cow position: | chr14:25910362-25910716 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 119, 75 |
| Conread position: | 131-496 |
| Cow position: | chr14:447531-447896 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 190, 207 |
| Conread position: | 170-565 |
| Cow position: | chr14:25859249-25859644 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 81 |
| Conread position: | 178-459 |
| Cow position: | chr14:420632-420913 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 74, 70 |
| Conread position: | 186-528 |
| Cow position: | chr14:680220-680562 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-528 |
| Cow position: | chr14:3155406-3155748 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 229 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 122, 130 |
| Conread position: | 215-528 |
| Cow position: | chr14:447531-447844 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 106, 124 |
| Conread position: | 272-567 |
| Cow position: | chr14:3155408-3155703 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 150, 144 |
Show alignments to all cow chromosomes.