Cow genome map
Conread name: | Ss1.1-rthg15_j20.5 |
Conread position: | 1-459 |
Cow position: | chr17:22589786-22589328 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 277 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 306, 315 |
Conread position: | 1-461 |
Cow position: | chr17:22551948-22551487 (view UCSC Genome Browser custom track) |
Alignm length: | 463 |
Alignm identity: | 285 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 420, 415 |
Conread position: | 1-537 |
Cow position: | chr17:22552200-22551664 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 168 |
Conread position: | 2-537 |
Cow position: | chr17:22552787-22552252 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 6-568 |
Cow position: | chr17:22473239-22473797 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 343 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 240, 11 |
Conread position: | 7-392 |
Cow position: | chr17:22452059-22451674 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 231, 238 |
Conread position: | 7-538 |
Cow position: | chr17:22553118-22552587 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 247, 241 |
Conread position: | 7-541 |
Cow position: | chr17:22552614-22552080 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 328 |
Alignm E-value: | 8.96831e-44 |
Alignm gaps (pig, cow): | 414, 404 |
Conread position: | 7-541 |
Cow position: | chr17:22590200-22589666 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 334 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 301, 308 |
Conread position: | 8-293 |
Cow position: | chr17:22498820-22498535 (view UCSC Genome Browser custom track) |
Alignm length: | 288 |
Alignm identity: | 184 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 65, 59 |
Conread position: | 8-531 |
Cow position: | chr17:22552949-22552426 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 238, 224 |
Conread position: | 8-537 |
Cow position: | chr17:22552025-22551496 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 327 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 148, 129 |
Conread position: | 8-538 |
Cow position: | chr17:22499156-22498626 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 328 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 73, 78 |
Conread position: | 8-538 |
Cow position: | chr17:22552445-22551915 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 156, 164 |
Conread position: | 8-538 |
Cow position: | chr17:22552697-22552167 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 57 |
Conread position: | 8-540 |
Cow position: | chr17:22473405-22473938 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 519, 0 |
Conread position: | 8-541 |
Cow position: | chr17:22452310-22451777 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 58, 45 |
Conread position: | 8-541 |
Cow position: | chr17:22499072-22498539 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 337 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 61, 57 |
Conread position: | 8-541 |
Cow position: | chr17:22552277-22551744 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 224 |
Conread position: | 8-541 |
Cow position: | chr17:22589947-22589414 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 340 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 173, 165 |
Conread position: | 8-558 |
Cow position: | chr17:22499324-22498774 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 224 |
Conread position: | 8-567 |
Cow position: | chr17:22590115-22589556 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 70 |
Conread position: | 9-487 |
Cow position: | chr17:22589694-22589216 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 299 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 67, 54 |
Conread position: | 9-568 |
Cow position: | chr17:22473322-22473881 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 126 |
Conread position: | 10-538 |
Cow position: | chr17:22552527-22551999 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 451, 457 |
Conread position: | 11-492 |
Cow position: | chr17:41440965-41440484 (view UCSC Genome Browser custom track) |
Alignm length: | 486 |
Alignm identity: | 291 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 81, 66 |
Conread position: | 11-537 |
Cow position: | chr17:22499237-22498711 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 325 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 160, 153 |
Conread position: | 14-451 |
Cow position: | chr17:22552859-22552422 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 271 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-462 |
Cow position: | chr17:22498982-22498534 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 277 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 236, 241 |
Conread position: | 14-541 |
Cow position: | chr17:22552103-22551576 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 219 |
Conread position: | 14-566 |
Cow position: | chr17:22452388-22451836 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 144, 158 |
Conread position: | 20-409 |
Cow position: | chr17:22589599-22589210 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 255 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 52, 45 |
Conread position: | 21-567 |
Cow position: | chr17:22553020-22552474 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 234, 228 |
Conread position: | 22-541 |
Cow position: | chr17:22590269-22589750 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 319 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 439, 445 |
Conread position: | 23-574 |
Cow position: | chr17:22499393-22498842 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 331 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 399, 393 |
Conread position: | 71-541 |
Cow position: | chr17:22590304-22589834 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 295 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 166, 161 |
Conread position: | 87-541 |
Cow position: | chr17:22553122-22552668 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 279 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 9, 34 |
Conread position: | 121-541 |
Cow position: | chr17:22499379-22498959 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 269 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 218, 207 |
Conread position: | 158-536 |
Cow position: | chr17:22452412-22452034 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 246 |
Alignm E-value: | 6e-40 |
Alignm gaps (pig, cow): | 265, 258 |
Conread position: | 170-569 |
Cow position: | chr17:22590289-22589890 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 253 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 137, 144 |
Conread position: | 187-519 |
Cow position: | chr17:22499395-22499065 (view UCSC Genome Browser custom track) |
Alignm length: | 334 |
Alignm identity: | 209 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 236, 9 |
Conread position: | 250-559 |
Cow position: | chr17:22553127-22552817 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 195 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 114, 119 |
Show alignments to all cow chromosomes.