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Cow genome map

           
Conread name:
           
Ss1.1-rthg15_j20.5
        

               
Conread position:
               
1-290
               

               
Cow position:
               
chr18:51400933-51401222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 76
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr18:51969740-51970046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
252, 57
               

               
Conread position:
               
1-391
               

               
Cow position:
               
chr18:50058970-50058580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
182, 178
               

               
Conread position:
               
1-392
               

               
Cow position:
               
chr18:51812315-51811924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-448
               

               
Cow position:
               
chr18:51400765-51401212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr18:54993473-54993944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr18:55008876-55009347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
86, 56
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr18:55523457-55523930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 173
               

               
Conread position:
               
1-475
               

               
Cow position:
               
chr18:54992885-54993359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr18:53587018-53586540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
422, 409
               

               
Conread position:
               
1-480
               

               
Cow position:
               
chr18:54980129-54980607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
1-528
               

               
Cow position:
               
chr18:51400597-51401124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 169
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr18:51368369-51367830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 80
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr18:51765933-51765394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
55, 65
               

               
Conread position:
               
1-540
               

               
Cow position:
               
chr18:51839412-51838873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-541
               

               
Cow position:
               
chr18:44154386-44153853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 229
               

               
Conread position:
               
1-541
               

               
Cow position:
               
chr18:51812903-51812363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 85
               

               
Conread position:
               
1-541
               

               
Cow position:
               
chr18:51969490-51970019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
248, 107
               

               
Conread position:
               
1-541
               

               
Cow position:
               
chr18:55017777-55018317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
392, 412
               

               
Conread position:
               
1-562
               

               
Cow position:
               
chr18:51969322-51969872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 168
               

               
Conread position:
               
2-222
               

               
Cow position:
               
chr18:51788903-51788683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr18:42837450-42837145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
2-364
               

               
Cow position:
               
chr18:40075341-40075703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 60
               

               
Conread position:
               
2-373
               

               
Cow position:
               
chr18:44153647-44153280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
2-444
               

               
Cow position:
               
chr18:42693646-42693205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
181, 162
               

               
Conread position:
               
2-472
               

               
Cow position:
               
chr18:53586429-53585959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 162
               

               
Conread position:
               
2-476
               

               
Cow position:
               
chr18:50059641-50059167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
124, 129
               

               
Conread position:
               
2-482
               

               
Cow position:
               
chr18:53498119-53498602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 88
               

               
Conread position:
               
2-482
               

               
Cow position:
               
chr18:56330121-56329641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
319, 327
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr18:49022796-49023287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 72
               

               
Conread position:
               
2-498
               

               
Cow position:
               
chr18:55497556-55497060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
85, 80
               

               
Conread position:
               
2-539
               

               
Cow position:
               
chr18:42791450-42791987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
58, 51
               

               
Conread position:
               
2-539
               

               
Cow position:
               
chr18:49033232-49032695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
421, 415
               

               
Conread position:
               
2-541
               

               
Cow position:
               
chr18:40324818-40324279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 84
               

               
Conread position:
               
2-541
               

               
Cow position:
               
chr18:53635726-53635187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 96
               

               
Conread position:
               
2-558
               

               
Cow position:
               
chr18:56433782-56434331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
2-562
               

               
Cow position:
               
chr18:53610233-53609674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
169, 156
               

               
Conread position:
               
2-562
               

               
Cow position:
               
chr18:53635558-53634999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
169, 156
               

               
Conread position:
               
2-562
               

               
Cow position:
               
chr18:56128607-56129166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
169, 157
               

               
Conread position:
               
2-568
               

               
Cow position:
               
chr18:56493910-56494476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 90
               

               
Conread position:
               
2-572
               

               
Cow position:
               
chr18:51400430-51400999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
566, 0
               

               
Conread position:
               
4-515
               

               
Cow position:
               
chr18:56493997-56494504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 11
               

               
Conread position:
               
4-528
               

               
Cow position:
               
chr18:50848067-50848591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
6, 71
               

               
Conread position:
               
4-538
               

               
Cow position:
               
chr18:42694150-42693614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 63
               

               
Conread position:
               
4-538
               

               
Cow position:
               
chr18:56329782-56329249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 5
               

               
Conread position:
               
5-453
               

               
Cow position:
               
chr18:50022589-50022138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
64, 60
               

               
Conread position:
               
5-474
               

               
Cow position:
               
chr18:54992722-54993190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
231, 5
               

               
Conread position:
               
5-540
               

               
Cow position:
               
chr18:54979462-54979996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
43, 5
               

               
Conread position:
               
6-399
               

               
Cow position:
               
chr18:53560417-53560805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
138, 9
               

               
Conread position:
               
6-541
               

               
Cow position:
               
chr18:51812646-51812111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 166
               

               
Conread position:
               
6-559
               

               
Cow position:
               
chr18:53525677-53526231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
9, 164
               

               
Conread position:
               
6-567
               

               
Cow position:
               
chr18:53509223-53509785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
9, 164
               

               
Conread position:
               
6-568
               

               
Cow position:
               
chr18:53635637-53635076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
165, 7
               

               
Conread position:
               
6-568
               

               
Cow position:
               
chr18:56128528-56129089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
165, 7
               

               
Conread position:
               
6-569
               

               
Cow position:
               
chr18:51789487-51788924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 166
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr18:40324141-40323921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
193, 0
               

               
Conread position:
               
7-277
               

               
Cow position:
               
chr18:42837361-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
149, 130
               

               
Conread position:
               
7-279
               

               
Cow position:
               
chr18:51873688-51873959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
7-331
               

               
Cow position:
               
chr18:14453217-14452893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
164, 157
               

               
Conread position:
               
7-435
               

               
Cow position:
               
chr18:43022412-43021984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 308
               

               
Conread position:
               
7-452
               

               
Cow position:
               
chr18:44184395-44183950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 225
               

               
Conread position:
               
7-474
               

               
Cow position:
               
chr18:44153883-44153428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
7-474
               

               
Cow position:
               
chr18:54968025-54968492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
71, 50
               

               
Conread position:
               
7-515
               

               
Cow position:
               
chr18:43168031-43168539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 224
               

               
Conread position:
               
7-528
               

               
Cow position:
               
chr18:54966936-54967459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 394
               

               
Conread position:
               
7-531
               

               
Cow position:
               
chr18:50059218-50058692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
5, 227
               

               
Conread position:
               
7-537
               

               
Cow position:
               
chr18:50281743-50282275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
8, 77
               

               
Conread position:
               
7-538
               

               
Cow position:
               
chr18:53635805-53635274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
58, 89
               

               
Conread position:
               
7-539
               

               
Cow position:
               
chr18:43167777-43168311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
5, 111
               

               
Conread position:
               
7-540
               

               
Cow position:
               
chr18:51789905-51789373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 16
               

               
Conread position:
               
7-541
               

               
Cow position:
               
chr18:43022580-43022046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 80
               

               
Conread position:
               
7-541
               

               
Cow position:
               
chr18:44184899-44184365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 60
               

               
Conread position:
               
7-541
               

               
Cow position:
               
chr18:44240248-44240782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
7-541
               

               
Cow position:
               
chr18:51765675-51765141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 165
               

               
Conread position:
               
7-541
               

               
Cow position:
               
chr18:51766094-51765561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
7-541
               

               
Cow position:
               
chr18:56248172-56247628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
57, 46
               

               
Conread position:
               
7-567
               

               
Cow position:
               
chr18:44184563-44184003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 225
               

               
Conread position:
               
7-568
               

               
Cow position:
               
chr18:42985405-42984844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 57
               

               
Conread position:
               
7-568
               

               
Cow position:
               
chr18:51752347-51751787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
7-568
               

               
Cow position:
               
chr18:51813064-51812504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 16
               

               
Conread position:
               
7-581
               

               
Cow position:
               
chr18:49021474-49022042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
8-194
               

               
Cow position:
               
chr18:42674577-42674391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-228
               

               
Cow position:
               
chr18:51765170-51764950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-231
               

               
Cow position:
               
chr18:43093010-43092788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
153, 162
               

               
Conread position:
               
8-268
               

               
Cow position:
               
chr18:49032302-49032042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
61, 70
               

               
Conread position:
               
8-281
               

               
Cow position:
               
chr18:14453132-14452859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-282
               

               
Cow position:
               
chr18:50271869-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
8-284
               

               
Cow position:
               
chr18:42792632-42792908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-307
               

               
Cow position:
               
chr18:52448104-52448404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
143, 127
               

               
Conread position:
               
8-318
               

               
Cow position:
               
chr18:40085948-40085637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
206, 212
               

               
Conread position:
               
8-325
               

               
Cow position:
               
chr18:51874380-51874697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 63
               

               
Conread position:
               
8-361
               

               
Cow position:
               
chr18:44397863-44397510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
147, 130
               

               
Conread position:
               
8-365
               

               
Cow position:
               
chr18:49022970-49023327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
162, 157
               

               
Conread position:
               
8-366
               

               
Cow position:
               
chr18:54980304-54980661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
46, 63
               

               
Conread position:
               
8-381
               

               
Cow position:
               
chr18:33063942-33063568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
298, 321
               

               
Conread position:
               
8-396
               

               
Cow position:
               
chr18:40306577-40306965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
136, 127
               

               
Conread position:
               
8-396
               

               
Cow position:
               
chr18:51367607-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
247, 241
               

               
Conread position:
               
8-396
               

               
Cow position:
               
chr18:54967191-54967578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
137, 127
               

               
Conread position:
               
8-400
               

               
Cow position:
               
chr18:51969663-51970046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
236, 133
               

               
Conread position:
               
8-433
               

               
Cow position:
               
chr18:49032470-49032045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
162, 156
               

               
Conread position:
               
8-438
               

               
Cow position:
               
chr18:53498548-53498979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 70
               

               
Conread position:
               
8-443
               

               
Cow position:
               
chr18:53525848-53526283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
142, 158
               

               
Conread position:
               
8-449
               

               
Cow position:
               
chr18:40324308-40323872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
79, 61
               

               
Conread position:
               
8-449
               

               
Cow position:
               
chr18:41198319-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 127
               

               
Conread position:
               
8-449
               

               
Cow position:
               
chr18:43168116-43168555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 151
               

               
Conread position:
               
8-449
               

               
Cow position:
               
chr18:50281914-50282355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
217, 223
               

               
Conread position:
               
8-452
               

               
Cow position:
               
chr18:55066954-55066510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
73, 83
               

               
Conread position:
               
8-453
               

               
Cow position:
               
chr18:50022247-50021799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
168, 332
               

               
Conread position:
               
8-453
               

               
Cow position:
               
chr18:50030913-50030463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
50, 87
               

               
Conread position:
               
8-453
               

               
Cow position:
               
chr18:50048899-50048454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
148, 129
               

               
Conread position:
               
8-454
               

               
Cow position:
               
chr18:14453948-14453502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
79, 74
               

               
Conread position:
               
8-454
               

               
Cow position:
               
chr18:56316289-56316735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
208, 201
               

               
Conread position:
               
8-455
               

               
Cow position:
               
chr18:50058879-50058434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
91, 87
               

               
Conread position:
               
8-459
               

               
Cow position:
               
chr18:22634628-22635079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
148, 127
               

               
Conread position:
               
8-460
               

               
Cow position:
               
chr18:55523884-55524336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
139, 154
               

               
Conread position:
               
8-462
               

               
Cow position:
               
chr18:42827476-42827930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
159, 155
               

               
Conread position:
               
8-464
               

               
Cow position:
               
chr18:51839237-51838782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 224
               

               
Conread position:
               
8-469
               

               
Cow position:
               
chr18:51751927-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 156
               

               
Conread position:
               
8-470
               

               
Cow position:
               
chr18:51969581-51970032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
407, 29
               

               
Conread position:
               
8-474
               

               
Cow position:
               
chr18:55018120-55018586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
8-475
               

               
Cow position:
               
chr18:51368194-51367728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 129
               

               
Conread position:
               
8-475
               

               
Cow position:
               
chr18:52012035-52011568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 59
               

               
Conread position:
               
8-475
               

               
Cow position:
               
chr18:53498041-53498512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
65, 82
               

               
Conread position:
               
8-480
               

               
Cow position:
               
chr18:33093118-33092646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
8-480
               

               
Cow position:
               
chr18:40086526-40086057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 78
               

               
Conread position:
               
8-480
               

               
Cow position:
               
chr18:43093346-43092875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 397
               

               
Conread position:
               
8-480
               

               
Cow position:
               
chr18:50271617-50272088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
408, 415
               

               
Conread position:
               
8-481
               

               
Cow position:
               
chr18:22634712-22635184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
50, 72
               

               
Conread position:
               
8-481
               

               
Cow position:
               
chr18:50059383-50058910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
222, 235
               

               
Conread position:
               
8-483
               

               
Cow position:
               
chr18:40074927-40075402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
8-483
               

               
Cow position:
               
chr18:40324392-40323918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
63, 57
               

               
Conread position:
               
8-483
               

               
Cow position:
               
chr18:50083690-50084165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 152
               

               
Conread position:
               
8-483
               

               
Cow position:
               
chr18:53498383-53498858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
334, 69
               

               
Conread position:
               
8-483
               

               
Cow position:
               
chr18:53509478-53509953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
163, 148
               

               
Conread position:
               
8-483
               

               
Cow position:
               
chr18:53525932-53526407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
154, 134
               

               
Conread position:
               
8-483
               

               
Cow position:
               
chr18:53586759-53586284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
415, 402
               

               
Conread position:
               
8-484
               

               
Cow position:
               
chr18:51838714-51838243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
152, 127
               

               
Conread position:
               
8-486
               

               
Cow position:
               
chr18:54979800-54980277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
8-495
               

               
Cow position:
               
chr18:50848659-50849146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 320
               

               
Conread position:
               
8-498
               

               
Cow position:
               
chr18:40075095-40075585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
8-498
               

               
Cow position:
               
chr18:42959891-42959410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 142
               

               
Conread position:
               
8-498
               

               
Cow position:
               
chr18:50281830-50282320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
329, 323
               

               
Conread position:
               
8-498
               

               
Cow position:
               
chr18:53560334-53560820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
139, 164
               

               
Conread position:
               
8-499
               

               
Cow position:
               
chr18:43048740-43048250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
61, 57
               

               
Conread position:
               
8-501
               

               
Cow position:
               
chr18:33093034-33092541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 75
               

               
Conread position:
               
8-501
               

               
Cow position:
               
chr18:43119999-43119506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 153
               

               
Conread position:
               
8-503
               

               
Cow position:
               
chr18:42693976-42693480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
298, 307
               

               
Conread position:
               
8-519
               

               
Cow position:
               
chr18:54979968-54980479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
238, 247
               

               
Conread position:
               
8-520
               

               
Cow position:
               
chr18:33092950-33092438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 218
               

               
Conread position:
               
8-520
               

               
Cow position:
               
chr18:42674913-42674401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 149
               

               
Conread position:
               
8-520
               

               
Cow position:
               
chr18:42984984-42984472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
8-520
               

               
Cow position:
               
chr18:43022495-43021983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 247
               

               
Conread position:
               
8-524
               

               
Cow position:
               
chr18:53559830-53560346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 150
               

               
Conread position:
               
8-524
               

               
Cow position:
               
chr18:55066870-55066354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
150, 164
               

               
Conread position:
               
8-525
               

               
Cow position:
               
chr18:42837612-42837095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 224
               

               
Conread position:
               
8-525
               

               
Cow position:
               
chr18:56329359-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 156
               

               
Conread position:
               
8-528
               

               
Cow position:
               
chr18:42675249-42674729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
311, 318
               

               
Conread position:
               
8-528
               

               
Cow position:
               
chr18:42791708-42792228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-528
               

               
Cow position:
               
chr18:44184478-44183958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 164
               

               
Conread position:
               
8-528
               

               
Cow position:
               
chr18:44398031-44397511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
8-528
               

               
Cow position:
               
chr18:53559998-53560518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
163, 150
               

               
Conread position:
               
8-528
               

               
Cow position:
               
chr18:55067038-55066518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
413, 401
               

               
Conread position:
               
8-528
               

               
Cow position:
               
chr18:55523800-55524320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
67, 50
               

               
Conread position:
               
8-531
               

               
Cow position:
               
chr18:51368530-51368007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 176
               

               
Conread position:
               
8-532
               

               
Cow position:
               
chr18:42792380-42792904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 238
               

               
Conread position:
               
8-533
               

               
Cow position:
               
chr18:42744309-42743784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 164
               

               
Conread position:
               
8-533
               

               
Cow position:
               
chr18:44240333-44240858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
8-536
               

               
Cow position:
               
chr18:1418074-1418602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 95
               

               
Conread position:
               
8-536
               

               
Cow position:
               
chr18:33064194-33063666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 306
               

               
Conread position:
               
8-536
               

               
Cow position:
               
chr18:33064278-33063750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 74
               

               
Conread position:
               
8-536
               

               
Cow position:
               
chr18:33064362-33063834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 82
               

               
Conread position:
               
8-536
               

               
Cow position:
               
chr18:41948856-41948328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 78
               

               
Conread position:
               
8-536
               

               
Cow position:
               
chr18:53586591-53586064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 79
               

               
Conread position:
               
8-536
               

               
Cow position:
               
chr18:55018204-55018732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
8-536
               

               
Cow position:
               
chr18:56433959-56434476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
241, 58
               

               
Conread position:
               
8-537
               

               
Cow position:
               
chr18:33064866-33064337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 243
               

               
Conread position:
               
8-537
               

               
Cow position:
               
chr18:42675081-42674552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 409
               

               
Conread position:
               
8-537
               

               
Cow position:
               
chr18:42791792-42792321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
415, 408
               

               
Conread position:
               
8-537
               

               
Cow position:
               
chr18:53560166-53560695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
133, 153
               

               
Conread position:
               
8-537
               

               
Cow position:
               
chr18:56316205-56316734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
408, 414
               

               
Conread position:
               
8-537
               

               
Cow position:
               
chr18:56329527-56328998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 74
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:40086442-40085922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
319, 234
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:41197563-41198093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 127
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:41197815-41198345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 175
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:41949192-41948662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 408
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:42675333-42674803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
415, 409
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:42744645-42744115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 78
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:42837696-42837166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 225
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:42837864-42837334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 78
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:43093430-43092900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 129
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:44239745-44240275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 79
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:44239997-44240527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 245
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:49032806-49032276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 129
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:49033310-49032780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 70
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:50083354-50083884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 304
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:50295260-50295790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:54993144-54993674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:55523548-55524078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:56329611-56329081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 175
               

               
Conread position:
               
8-539
               

               
Cow position:
               
chr18:50099047-50099578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
139, 151
               

               
Conread position:
               
8-540
               

               
Cow position:
               
chr18:42674997-42674465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 66
               

               
Conread position:
               
8-540
               

               
Cow position:
               
chr18:42744393-42743861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 247
               

               
Conread position:
               
8-540
               

               
Cow position:
               
chr18:42960311-42959779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 145
               

               
Conread position:
               
8-540
               

               
Cow position:
               
chr18:44240081-44240613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 78
               

               
Conread position:
               
8-540
               

               
Cow position:
               
chr18:51367775-51367243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 78
               

               
Conread position:
               
8-540
               

               
Cow position:
               
chr18:51789569-51789037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 164
               

               
Conread position:
               
8-540
               

               
Cow position:
               
chr18:53509394-53509926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
142, 158
               

               
Conread position:
               
8-540
               

               
Cow position:
               
chr18:54967776-54968306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 49
               

               
Conread position:
               
8-540
               

               
Cow position:
               
chr18:54992808-54993340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
50, 84
               

               
Conread position:
               
8-540
               

               
Cow position:
               
chr18:54993228-54993760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
380, 363
               

               
Conread position:
               
8-540
               

               
Cow position:
               
chr18:54993312-54993844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
399, 394
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:33064614-33064081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 157
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:40086192-40085666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
68, 58
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:40086948-40086413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
61, 57
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:40324560-40324027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 40
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:41197731-41198264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 211
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:41198151-41198684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 54
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:41949108-41948575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
408, 415
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:42792128-42792661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 34
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:42837780-42837247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 307
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:42960059-42959535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 229
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:42985152-42984619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 129
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:42985572-42985039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 238
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:43023083-43022550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 57
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:43120083-43119550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 48
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:43120167-43119634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 164
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:43120335-43119802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
65, 49
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:43175116-43174583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
391, 381
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:43175452-43174919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 78
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:44154211-44153685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 156
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:44184646-44184113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 142
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:44253567-44253048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:44398115-44397582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 306
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:44398199-44397666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 164
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:44398367-44397834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 223
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:44398451-44397918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 393
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:51752095-51751561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:51789317-51788784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 224
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:51789401-51788868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 79
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:51812560-51812027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
236, 224
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:52447684-52448217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 164
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:53586843-53586310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
300, 331
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:54967359-54967889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:54979632-54980164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 408
               

               
Conread position:
               
8-541
               

               
Cow position:
               
chr18:54992976-54993508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
68, 59
               

               
Conread position:
               
8-545
               

               
Cow position:
               
chr18:55018036-55018571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 311
               

               
Conread position:
               
8-547
               

               
Cow position:
               
chr18:51969179-51969698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 50
               

               
Conread position:
               
8-548
               

               
Cow position:
               
chr18:51752263-51751723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
409, 414
               

               
Conread position:
               
8-553
               

               
Cow position:
               
chr18:43175032-43174488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 151
               

               
Conread position:
               
8-556
               

               
Cow position:
               
chr18:51752179-51751634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 156
               

               
Conread position:
               
8-558
               

               
Cow position:
               
chr18:41197983-41198533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 127
               

               
Conread position:
               
8-558
               

               
Cow position:
               
chr18:43175200-43174650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 321
               

               
Conread position:
               
8-559
               

               
Cow position:
               
chr18:42791120-42791671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 303
               

               
Conread position:
               
8-559
               

               
Cow position:
               
chr18:44254067-44253519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
319, 157
               

               
Conread position:
               
8-559
               

               
Cow position:
               
chr18:44398283-44397732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 244
               

               
Conread position:
               
8-559
               

               
Cow position:
               
chr18:54979884-54980435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
396, 379
               

               
Conread position:
               
8-562
               

               
Cow position:
               
chr18:42744477-42743923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 246
               

               
Conread position:
               
8-562
               

               
Cow position:
               
chr18:51969413-51969956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 164
               

               
Conread position:
               
8-565
               

               
Cow position:
               
chr18:41198067-41198624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 103
               

               
Conread position:
               
8-566
               

               
Cow position:
               
chr18:33064698-33064140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
8-566
               

               
Cow position:
               
chr18:42791204-42791762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
161, 150
               

               
Conread position:
               
8-566
               

               
Cow position:
               
chr18:51368446-51367888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
146, 133
               

               
Conread position:
               
8-566
               

               
Cow position:
               
chr18:52012287-52011729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 71
               

               
Conread position:
               
8-566
               

               
Cow position:
               
chr18:53636056-53635498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
297, 317
               

               
Conread position:
               
8-567
               

               
Cow position:
               
chr18:1417990-1418549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
136, 127
               

               
Conread position:
               
8-567
               

               
Cow position:
               
chr18:42985320-42984761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
8-567
               

               
Cow position:
               
chr18:43175536-43174977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
414, 408
               

               
Conread position:
               
8-568
               

               
Cow position:
               
chr18:43022915-43022355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 224
               

               
Conread position:
               
8-568
               

               
Cow position:
               
chr18:44239829-44240389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
386, 395
               

               
Conread position:
               
8-568
               

               
Cow position:
               
chr18:51400352-51400912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 307
               

               
Conread position:
               
8-568
               

               
Cow position:
               
chr18:52447432-52447992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 164
               

               
Conread position:
               
8-569
               

               
Cow position:
               
chr18:42675165-42674604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 224
               

               
Conread position:
               
8-569
               

               
Cow position:
               
chr18:43167946-43168509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
8-569
               

               
Cow position:
               
chr18:51812728-51812167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 164
               

               
Conread position:
               
8-569
               

               
Cow position:
               
chr18:56247657-56247106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
145, 130
               

               
Conread position:
               
8-570
               

               
Cow position:
               
chr18:50848491-50849053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
143, 163
               

               
Conread position:
               
8-591
               

               
Cow position:
               
chr18:50848239-50848820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
55, 65
               

               
Conread position:
               
9-306
               

               
Cow position:
               
chr18:50295513-50295810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
155, 163
               

               
Conread position:
               
9-343
               

               
Cow position:
               
chr18:50083943-50084277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
9-375
               

               
Cow position:
               
chr18:52433811-52434177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
232, 245
               

               
Conread position:
               
9-447
               

               
Cow position:
               
chr18:33064025-33063587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 56
               

               
Conread position:
               
9-447
               

               
Cow position:
               
chr18:50021823-50021381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
72, 78
               

               
Conread position:
               
9-452
               

               
Cow position:
               
chr18:50099804-50100247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
132, 151
               

               
Conread position:
               
9-456
               

               
Cow position:
               
chr18:50848996-50849443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
78, 69
               

               
Conread position:
               
9-457
               

               
Cow position:
               
chr18:50099888-50100336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
53, 63
               

               
Conread position:
               
9-459
               

               
Cow position:
               
chr18:52428546-52428996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
246, 239
               

               
Conread position:
               
9-459
               

               
Cow position:
               
chr18:52433727-52434177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
246, 240
               

               
Conread position:
               
9-459
               

               
Cow position:
               
chr18:53559915-53560365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
73, 68
               

               
Conread position:
               
9-474
               

               
Cow position:
               
chr18:49022635-49023100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 68
               

               
Conread position:
               
9-474
               

               
Cow position:
               
chr18:54980221-54980685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
69, 48
               

               
Conread position:
               
9-480
               

               
Cow position:
               
chr18:14454031-14453561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
335, 323
               

               
Conread position:
               
9-481
               

               
Cow position:
               
chr18:50099720-50100192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
145, 162
               

               
Conread position:
               
9-482
               

               
Cow position:
               
chr18:42791961-42792434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 200
               

               
Conread position:
               
9-482
               

               
Cow position:
               
chr18:50246234-50246707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
9-523
               

               
Cow position:
               
chr18:49032553-49032039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
312, 321
               

               
Conread position:
               
9-525
               

               
Cow position:
               
chr18:51969096-51969594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
406, 137
               

               
Conread position:
               
9-537
               

               
Cow position:
               
chr18:52447853-52448382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 78
               

               
Conread position:
               
9-538
               

               
Cow position:
               
chr18:43167865-43168394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 163
               

               
Conread position:
               
9-538
               

               
Cow position:
               
chr18:50848828-50849357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 245
               

               
Conread position:
               
9-539
               

               
Cow position:
               
chr18:50099384-50099914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
53, 86
               

               
Conread position:
               
9-540
               

               
Cow position:
               
chr18:49032889-49032358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 132
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:41948939-41948407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 223
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:50022162-50021624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 157
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:51368277-51367746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:52427874-52428406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 314
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:52427958-52428490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 159
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:52428126-52428658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 77
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:52428210-52428742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
147, 159
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:52428294-52428826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:52428462-52428994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 306
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:52433139-52433671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 150
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:52433307-52433839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 77
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:52433391-52433923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
147, 159
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:52433475-52434007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 56
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:52433559-52434091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 77
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:52433643-52434175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 306
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:52447097-52447629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 152
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:52447181-52447713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 69
               

               
Conread position:
               
9-541
               

               
Cow position:
               
chr18:56247740-56247216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 215
               

               
Conread position:
               
9-545
               

               
Cow position:
               
chr18:53498210-53498747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
92, 169
               

               
Conread position:
               
9-566
               

               
Cow position:
               
chr18:56316122-56316679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
9-568
               

               
Cow position:
               
chr18:52447265-52447824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 94
               

               
Conread position:
               
9-568
               

               
Cow position:
               
chr18:52447601-52448160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 78
               

               
Conread position:
               
10-306
               

               
Cow position:
               
chr18:44253242-44252947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
245, 125
               

               
Conread position:
               
10-351
               

               
Cow position:
               
chr18:22634882-22635223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 58
               

               
Conread position:
               
10-389
               

               
Cow position:
               
chr18:50048729-50048350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr18:44253158-44252789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
141, 43
               

               
Conread position:
               
10-401
               

               
Cow position:
               
chr18:51788979-51788590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 85
               

               
Conread position:
               
10-446
               

               
Cow position:
               
chr18:50048813-50048377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
48, 78
               

               
Conread position:
               
10-449
               

               
Cow position:
               
chr18:42792466-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
10-456
               

               
Cow position:
               
chr18:51874214-51874660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 162
               

               
Conread position:
               
10-474
               

               
Cow position:
               
chr18:49032636-49032172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 154
               

               
Conread position:
               
10-480
               

               
Cow position:
               
chr18:51766008-51765538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
297, 307
               

               
Conread position:
               
10-492
               

               
Cow position:
               
chr18:53586505-53586023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
413, 406
               

               
Conread position:
               
10-519
               

               
Cow position:
               
chr18:54967109-54967618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
10-520
               

               
Cow position:
               
chr18:43093260-43092752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
361, 365
               

               
Conread position:
               
10-532
               

               
Cow position:
               
chr18:41198237-41198759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 406
               

               
Conread position:
               
10-535
               

               
Cow position:
               
chr18:40324474-40323949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 76
               

               
Conread position:
               
10-536
               

               
Cow position:
               
chr18:52447770-52448296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 406
               

               
Conread position:
               
10-536
               

               
Cow position:
               
chr18:55008633-55009158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 62
               

               
Conread position:
               
10-538
               

               
Cow position:
               
chr18:1417824-1418352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
295, 302
               

               
Conread position:
               
10-538
               

               
Cow position:
               
chr18:41197901-41198429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
168, 174
               

               
Conread position:
               
10-538
               

               
Cow position:
               
chr18:42744727-42744199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
470, 466
               

               
Conread position:
               
10-538
               

               
Cow position:
               
chr18:49032972-49032444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
393, 413
               

               
Conread position:
               
10-538
               

               
Cow position:
               
chr18:50083440-50083968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
413, 395
               

               
Conread position:
               
10-538
               

               
Cow position:
               
chr18:55017954-55018482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 148
               

               
Conread position:
               
10-539
               

               
Cow position:
               
chr18:42791290-42791819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
452, 457
               

               
Conread position:
               
10-539
               

               
Cow position:
               
chr18:50271535-50272064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
10-540
               

               
Cow position:
               
chr18:42792298-42792828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 220
               

               
Conread position:
               
10-541
               

               
Cow position:
               
chr18:42791878-42792409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 406
               

               
Conread position:
               
10-541
               

               
Cow position:
               
chr18:43093596-43093065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 398
               

               
Conread position:
               
10-541
               

               
Cow position:
               
chr18:44184812-44184281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 57
               

               
Conread position:
               
10-541
               

               
Cow position:
               
chr18:51367940-51367410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 132
               

               
Conread position:
               
10-541
               

               
Cow position:
               
chr18:51368613-51368081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 163
               

               
Conread position:
               
10-541
               

               
Cow position:
               
chr18:51765504-51764973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 162
               

               
Conread position:
               
10-541
               

               
Cow position:
               
chr18:51789651-51789120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 162
               

               
Conread position:
               
10-541
               

               
Cow position:
               
chr18:51789735-51789204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 76
               

               
Conread position:
               
10-541
               

               
Cow position:
               
chr18:51812810-51812279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 162
               

               
Conread position:
               
10-541
               

               
Cow position:
               
chr18:51839487-51838956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
310, 327
               

               
Conread position:
               
10-541
               

               
Cow position:
               
chr18:52427707-52428238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 229
               

               
Conread position:
               
10-541
               

               
Cow position:
               
chr18:52433056-52433587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 229
               

               
Conread position:
               
10-541
               

               
Cow position:
               
chr18:52446930-52447461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
134, 127
               

               
Conread position:
               
10-541
               

               
Cow position:
               
chr18:52447518-52448049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
452, 457
               

               
Conread position:
               
10-542
               

               
Cow position:
               
chr18:50848913-50849445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 66
               

               
Conread position:
               
10-562
               

               
Cow position:
               
chr18:42744559-42744007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 71
               

               
Conread position:
               
10-562
               

               
Cow position:
               
chr18:44154464-44153910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 247
               

               
Conread position:
               
10-562
               

               
Cow position:
               
chr18:52012369-52011817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 154
               

               
Conread position:
               
10-566
               

               
Cow position:
               
chr18:50848577-50849133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 80
               

               
Conread position:
               
10-567
               

               
Cow position:
               
chr18:33064780-33064223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 162
               

               
Conread position:
               
10-567
               

               
Cow position:
               
chr18:41197649-41198206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 301
               

               
Conread position:
               
10-568
               

               
Cow position:
               
chr18:44184728-44184170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 57
               

               
Conread position:
               
10-568
               

               
Cow position:
               
chr18:52447014-52447572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 313
               

               
Conread position:
               
10-570
               

               
Cow position:
               
chr18:42790954-42791514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
140, 128
               

               
Conread position:
               
10-570
               

               
Cow position:
               
chr18:42791374-42791934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 327
               

               
Conread position:
               
10-593
               

               
Cow position:
               
chr18:42792214-42792793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 305
               

               
Conread position:
               
11-205
               

               
Cow position:
               
chr18:43053384-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
76, 68
               

               
Conread position:
               
11-324
               

               
Cow position:
               
chr18:56267469-56267156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 63
               

               
Conread position:
               
11-396
               

               
Cow position:
               
chr18:50849082-50849467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
83, 88
               

               
Conread position:
               
11-446
               

               
Cow position:
               
chr18:50048980-50048545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
37, 31
               

               
Conread position:
               
11-456
               

               
Cow position:
               
chr18:51789146-51788701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 153
               

               
Conread position:
               
11-471
               

               
Cow position:
               
chr18:53610140-53609681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 170
               

               
Conread position:
               
11-476
               

               
Cow position:
               
chr18:53635465-53635001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 153
               

               
Conread position:
               
11-482
               

               
Cow position:
               
chr18:56128700-56129171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 153
               

               
Conread position:
               
11-483
               

               
Cow position:
               
chr18:42960224-42959752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 244
               

               
Conread position:
               
11-484
               

               
Cow position:
               
chr18:42724429-42723956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
329, 306
               

               
Conread position:
               
11-498
               

               
Cow position:
               
chr18:55497631-55497144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
324, 306
               

               
Conread position:
               
11-520
               

               
Cow position:
               
chr18:51789230-51788721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
406, 411
               

               
Conread position:
               
11-531
               

               
Cow position:
               
chr18:53610308-53609788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 85
               

               
Conread position:
               
11-536
               

               
Cow position:
               
chr18:54993063-54993587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 46
               

               
Conread position:
               
11-537
               

               
Cow position:
               
chr18:33064527-33064001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 70
               

               
Conread position:
               
11-537
               

               
Cow position:
               
chr18:53610392-53609866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
147, 163
               

               
Conread position:
               
11-538
               

               
Cow position:
               
chr18:33065115-33064588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
11-538
               

               
Cow position:
               
chr18:40306244-40306771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
11-538
               

               
Cow position:
               
chr18:56329692-56329165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
479, 496
               

               
Conread position:
               
11-541
               

               
Cow position:
               
chr18:51400691-51401221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 318
               

               
Conread position:
               
11-541
               

               
Cow position:
               
chr18:51812977-51812447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 148
               

               
Conread position:
               
11-542
               

               
Cow position:
               
chr18:51812473-51811942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
406, 411
               

               
Conread position:
               
11-558
               

               
Cow position:
               
chr18:49022387-49022932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
52, 68
               

               
Conread position:
               
11-562
               

               
Cow position:
               
chr18:40306412-40306963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
76, 67
               

               
Conread position:
               
11-565
               

               
Cow position:
               
chr18:56128448-56129002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
82, 87
               

               
Conread position:
               
11-566
               

               
Cow position:
               
chr18:56128112-56128667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
304, 328
               

               
Conread position:
               
11-568
               

               
Cow position:
               
chr18:51789818-51789261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 238
               

               
Conread position:
               
12-445
               

               
Cow position:
               
chr18:42724344-42723909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 74
               

               
Conread position:
               
12-484
               

               
Cow position:
               
chr18:53509650-53510126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
363, 334
               

               
Conread position:
               
12-498
               

               
Cow position:
               
chr18:52012199-52011713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
61, 79
               

               
Conread position:
               
12-519
               

               
Cow position:
               
chr18:51765418-51764911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
410, 389
               

               
Conread position:
               
12-531
               

               
Cow position:
               
chr18:49022472-49022989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
309, 124
               

               
Conread position:
               
12-538
               

               
Cow position:
               
chr18:53498303-53498826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
50, 62
               

               
Conread position:
               
12-539
               

               
Cow position:
               
chr18:42827397-42827923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
51, 6
               

               
Conread position:
               
12-541
               

               
Cow position:
               
chr18:51400524-51401053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 158
               

               
Conread position:
               
13-446
               

               
Cow position:
               
chr18:50246154-50246587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
61, 45
               

               
Conread position:
               
13-538
               

               
Cow position:
               
chr18:49033053-49032528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 74
               

               
Conread position:
               
14-396
               

               
Cow position:
               
chr18:50030823-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
25, 236
               

               
Conread position:
               
14-406
               

               
Cow position:
               
chr18:51874302-51874695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
144, 156
               

               
Conread position:
               
14-444
               

               
Cow position:
               
chr18:55497460-55497030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 63
               

               
Conread position:
               
14-448
               

               
Cow position:
               
chr18:49021729-49022164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 64
               

               
Conread position:
               
14-448
               

               
Cow position:
               
chr18:50295434-50295868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
323, 319
               

               
Conread position:
               
14-450
               

               
Cow position:
               
chr18:42693802-42693366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
169, 159
               

               
Conread position:
               
14-453
               

               
Cow position:
               
chr18:50083780-50084219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
291, 310
               

               
Conread position:
               
14-453
               

               
Cow position:
               
chr18:50246323-50246762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
14-453
               

               
Cow position:
               
chr18:55067116-55066677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
73, 53
               

               
Conread position:
               
14-459
               

               
Cow position:
               
chr18:40306331-40306776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
51, 76
               

               
Conread position:
               
14-474
               

               
Cow position:
               
chr18:50083612-50084072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 48
               

               
Conread position:
               
14-475
               

               
Cow position:
               
chr18:42959801-42959351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
224, 55
               

               
Conread position:
               
14-481
               

               
Cow position:
               
chr18:50022325-50021855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
247, 298
               

               
Conread position:
               
14-483
               

               
Cow position:
               
chr18:40306835-40307304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
170, 143
               

               
Conread position:
               
14-483
               

               
Cow position:
               
chr18:50083528-50083997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
125, 102
               

               
Conread position:
               
14-483
               

               
Cow position:
               
chr18:56316379-56316848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
42, 81
               

               
Conread position:
               
14-484
               

               
Cow position:
               
chr18:51839315-51838845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 218
               

               
Conread position:
               
14-498
               

               
Cow position:
               
chr18:42693718-42693234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
66, 81
               

               
Conread position:
               
14-531
               

               
Cow position:
               
chr18:40075185-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
227, 241
               

               
Conread position:
               
14-532
               

               
Cow position:
               
chr18:42693466-42692948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
144, 155
               

               
Conread position:
               
14-532
               

               
Cow position:
               
chr18:52446780-52447284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
235, 30
               

               
Conread position:
               
14-536
               

               
Cow position:
               
chr18:51874057-51874571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
231, 111
               

               
Conread position:
               
14-537
               

               
Cow position:
               
chr18:50848413-50848936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
357, 361
               

               
Conread position:
               
14-538
               

               
Cow position:
               
chr18:50059125-50058601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
159, 170
               

               
Conread position:
               
14-538
               

               
Cow position:
               
chr18:50099641-50100165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
217, 232
               

               
Conread position:
               
14-538
               

               
Cow position:
               
chr18:56128367-56128891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
14-540
               

               
Cow position:
               
chr18:53610473-53609947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
222, 217
               

               
Conread position:
               
14-541
               

               
Cow position:
               
chr18:41949270-41948743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 150
               

               
Conread position:
               
14-562
               

               
Cow position:
               
chr18:50848329-50848877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 155
               

               
Conread position:
               
14-566
               

               
Cow position:
               
chr18:41949018-41948466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 235
               

               
Conread position:
               
14-567
               

               
Cow position:
               
chr18:40324638-40324085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 118
               

               
Conread position:
               
14-567
               

               
Cow position:
               
chr18:42792050-42792603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 297
               

               
Conread position:
               
14-567
               

               
Cow position:
               
chr18:51765584-51765031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
403, 407
               

               
Conread position:
               
14-567
               

               
Cow position:
               
chr18:56329857-56329304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 63
               

               
Conread position:
               
14-568
               

               
Cow position:
               
chr18:50049145-50048591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
202, 196
               

               
Conread position:
               
14-569
               

               
Cow position:
               
chr18:52012448-52011894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 39
               

               
Conread position:
               
14-579
               

               
Cow position:
               
chr18:51969018-51969563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 12
               

               
Conread position:
               
15-478
               

               
Cow position:
               
chr18:49022725-49023187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 75
               

               
Conread position:
               
15-528
               

               
Cow position:
               
chr18:33064943-33064430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 50
               

               
Conread position:
               
15-536
               

               
Cow position:
               
chr18:50049060-50048539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
121, 102
               

               
Conread position:
               
16-539
               

               
Cow position:
               
chr18:50250838-50251350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
16-559
               

               
Cow position:
               
chr18:53587089-53586544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
16-568
               

               
Cow position:
               
chr18:50245989-50246541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
58, 42
               

               
Conread position:
               
17-541
               

               
Cow position:
               
chr18:41949351-41948827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 215
               

               
Conread position:
               
17-565
               

               
Cow position:
               
chr18:43093673-43093125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 70
               

               
Conread position:
               
20-400
               

               
Cow position:
               
chr18:56247480-56247107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
48, 25
               

               
Conread position:
               
20-449
               

               
Cow position:
               
chr18:14453288-14452859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 46
               

               
Conread position:
               
20-464
               

               
Cow position:
               
chr18:43094159-43093718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
214, 68
               

               
Conread position:
               
20-470
               

               
Cow position:
               
chr18:51970340-51970782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
221, 33
               

               
Conread position:
               
20-483
               

               
Cow position:
               
chr18:42724840-42724377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
221, 232
               

               
Conread position:
               
20-520
               

               
Cow position:
               
chr18:50295356-50295856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
50, 42
               

               
Conread position:
               
20-540
               

               
Cow position:
               
chr18:54967704-54968222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
43, 58
               

               
Conread position:
               
20-541
               

               
Cow position:
               
chr18:33065022-33064501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
30, 79
               

               
Conread position:
               
20-541
               

               
Cow position:
               
chr18:42985056-42984535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 46
               

               
Conread position:
               
20-541
               

               
Cow position:
               
chr18:52427549-52428070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
99, 85
               

               
Conread position:
               
20-541
               

               
Cow position:
               
chr18:52432898-52433419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
99, 85
               

               
Conread position:
               
20-568
               

               
Cow position:
               
chr18:51838786-51838243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
307, 195
               

               
Conread position:
               
21-566
               

               
Cow position:
               
chr18:42791637-42792182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 51
               

               
Conread position:
               
21-567
               

               
Cow position:
               
chr18:40075024-40075570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 95
               

               
Conread position:
               
22-289
               

               
Cow position:
               
chr18:43053457-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
148, 142
               

               
Conread position:
               
22-480
               

               
Cow position:
               
chr18:50098977-50099435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
286, 305
               

               
Conread position:
               
22-532
               

               
Cow position:
               
chr18:40324882-40324372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 41
               

               
Conread position:
               
22-537
               

               
Cow position:
               
chr18:56330185-56329670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 150
               

               
Conread position:
               
22-538
               

               
Cow position:
               
chr18:42837934-42837418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
22-541
               

               
Cow position:
               
chr18:50271463-50271982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
130, 138
               

               
Conread position:
               
23-536
               

               
Cow position:
               
chr18:40086601-40086084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
43, 298
               

               
Conread position:
               
23-538
               

               
Cow position:
               
chr18:44240180-44240695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 207
               

               
Conread position:
               
23-541
               

               
Cow position:
               
chr18:43022648-43022130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 203
               

               
Conread position:
               
24-537
               

               
Cow position:
               
chr18:42694044-42693531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 48
               

               
Conread position:
               
24-538
               

               
Cow position:
               
chr18:49033378-49032864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
24-541
               

               
Cow position:
               
chr18:43175268-43174751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
383, 377
               

               
Conread position:
               
24-541
               

               
Cow position:
               
chr18:52447364-52447881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 207
               

               
Conread position:
               
24-558
               

               
Cow position:
               
chr18:44253887-44253354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 385
               

               
Conread position:
               
24-562
               

               
Cow position:
               
chr18:43175352-43174814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 399
               

               
Conread position:
               
26-531
               

               
Cow position:
               
chr18:42693874-42693369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
157, 148
               

               
Conread position:
               
26-539
               

               
Cow position:
               
chr18:50083288-50083801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
293, 288
               

               
Conread position:
               
27-538
               

               
Cow position:
               
chr18:56247808-56247303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 67
               

               
Conread position:
               
29-538
               

               
Cow position:
               
chr18:53610542-53610033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
50, 36
               

               
Conread position:
               
29-565
               

               
Cow position:
               
chr18:41197500-41198036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 108
               

               
Conread position:
               
31-492
               

               
Cow position:
               
chr18:55497695-55497234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
32-568
               

               
Cow position:
               
chr18:51839549-51839013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
132, 152
               

               
Conread position:
               
35-482
               

               
Cow position:
               
chr18:53636113-53635666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
46, 51
               

               
Conread position:
               
35-482
               

               
Cow position:
               
chr18:56128052-56128499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
40, 24
               

               
Conread position:
               
35-541
               

               
Cow position:
               
chr18:43175593-43175087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 381
               

               
Conread position:
               
40-562
               

               
Cow position:
               
chr18:42675385-42674863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 123
               

               
Conread position:
               
44-456
               

               
Cow position:
               
chr18:40075299-40075710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
359, 379
               

               
Conread position:
               
44-480
               

               
Cow position:
               
chr18:50281698-50282135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
108, 115
               

               
Conread position:
               
44-481
               

               
Cow position:
               
chr18:50031042-50030606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
44-541
               

               
Cow position:
               
chr18:44253373-44252887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
44-541
               

               
Cow position:
               
chr18:56493697-56494197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 57
               

               
Conread position:
               
44-559
               

               
Cow position:
               
chr18:55523332-55523848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
29, 43
               

               
Conread position:
               
45-541
               

               
Cow position:
               
chr18:53559699-53560195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
46-537
               

               
Cow position:
               
chr18:51400306-51400797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 40
               

               
Conread position:
               
47-519
               

               
Cow position:
               
chr18:53587140-53586668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
89, 70
               

               
Conread position:
               
47-541
               

               
Cow position:
               
chr18:50022376-50021879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
184, 196
               

               
Conread position:
               
49-539
               

               
Cow position:
               
chr18:43167737-43168227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
203, 182
               

               
Conread position:
               
53-538
               

               
Cow position:
               
chr18:50059674-50059189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
163, 157
               

               
Conread position:
               
65-480
               

               
Cow position:
               
chr18:51367634-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 107
               

               
Conread position:
               
65-541
               

               
Cow position:
               
chr18:42837975-42837499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
190, 167
               

               
Conread position:
               
71-542
               

               
Cow position:
               
chr18:51874030-51874493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
72-541
               

               
Cow position:
               
chr18:44239977-44240446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 160
               

               
Conread position:
               
74-541
               

               
Cow position:
               
chr18:42985593-42985123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 110
               

               
Conread position:
               
80-400
               

               
Cow position:
               
chr18:51873676-51873996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
80-541
               

               
Cow position:
               
chr18:56248181-56247712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
315, 17
               

               
Conread position:
               
83-474
               

               
Cow position:
               
chr18:55008540-55008929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
238, 19
               

               
Conread position:
               
84-480
               

               
Cow position:
               
chr18:14454040-14453645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
224, 240
               

               
Conread position:
               
85-482
               

               
Cow position:
               
chr18:50245974-50246371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
241, 231
               

               
Conread position:
               
85-538
               

               
Cow position:
               
chr18:42827385-42827838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
13, 19
               

               
Conread position:
               
85-539
               

               
Cow position:
               
chr18:42790945-42791399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
141, 161
               

               
Conread position:
               
85-541
               

               
Cow position:
               
chr18:51970321-51970769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
137, 58
               

               
Conread position:
               
85-568
               

               
Cow position:
               
chr18:44184905-44184422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 147
               

               
Conread position:
               
86-460
               

               
Cow position:
               
chr18:56434111-56434485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
72, 84
               

               
Conread position:
               
86-486
               

               
Cow position:
               
chr18:53498035-53498441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 84
               

               
Conread position:
               
86-528
               

               
Cow position:
               
chr18:53559824-53560266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
57, 84
               

               
Conread position:
               
86-540
               

               
Cow position:
               
chr18:40074921-40075375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
336, 324
               

               
Conread position:
               
86-541
               

               
Cow position:
               
chr18:1417984-1418439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
193, 185
               

               
Conread position:
               
86-566
               

               
Cow position:
               
chr18:52012459-52011981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 13
               

               
Conread position:
               
86-568
               

               
Cow position:
               
chr18:51969323-51969803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 86
               

               
Conread position:
               
88-559
               

               
Cow position:
               
chr18:42960315-42959843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 227
               

               
Conread position:
               
91-532
               

               
Cow position:
               
chr18:43048741-43048302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
218, 233
               

               
Conread position:
               
92-476
               

               
Cow position:
               
chr18:53509225-53509609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
7, 76
               

               
Conread position:
               
92-480
               

               
Cow position:
               
chr18:53525679-53526067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
7, 76
               

               
Conread position:
               
94-538
               

               
Cow position:
               
chr18:54992726-54993170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
71, 64
               

               
Conread position:
               
98-484
               

               
Cow position:
               
chr18:50295184-50295568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
208, 21
               

               
Conread position:
               
98-536
               

               
Cow position:
               
chr18:55067116-55066679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
73, 59
               

               
Conread position:
               
98-545
               

               
Cow position:
               
chr18:53497966-53498414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
137, 53
               

               
Conread position:
               
99-541
               

               
Cow position:
               
chr18:42744722-42744280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 150
               

               
Conread position:
               
102-567
               

               
Cow position:
               
chr18:49033385-49032919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
9, 61
               

               
Conread position:
               
103-537
               

               
Cow position:
               
chr18:14453289-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
43, 34
               

               
Conread position:
               
103-565
               

               
Cow position:
               
chr18:56316048-56316510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
313, 320
               

               
Conread position:
               
105-482
               

               
Cow position:
               
chr18:50098978-50099353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
234, 13
               

               
Conread position:
               
105-541
               

               
Cow position:
               
chr18:40324881-40324447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
150, 16
               

               
Conread position:
               
107-481
               

               
Cow position:
               
chr18:53636125-53635751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
57, 65
               

               
Conread position:
               
110-541
               

               
Cow position:
               
chr18:52446946-52447377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
195, 205
               

               
Conread position:
               
114-541
               

               
Cow position:
               
chr18:55523317-55523744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
5, 44
               

               
Conread position:
               
117-566
               

               
Cow position:
               
chr18:51400291-51400742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
128-482
               

               
Cow position:
               
chr18:50281698-50282052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
151-459
               

               
Cow position:
               
chr18:50022526-50022216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
154-568
               

               
Cow position:
               
chr18:51968992-51969385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
170-526
               

               
Cow position:
               
chr18:40074921-40075277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
170-541
               

               
Cow position:
               
chr18:42675423-42675052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 87
               

               
Conread position:
               
170-576
               

               
Cow position:
               
chr18:50098957-50099363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
171-567
               

               
Cow position:
               
chr18:44239740-44240136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
172-541
               

               
Cow position:
               
chr18:33093122-33092753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
172-575
               

               
Cow position:
               
chr18:42675337-42674934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
173-498
               

               
Cow position:
               
chr18:56267476-56267150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
8, 82
               

               
Conread position:
               
175-536
               

               
Cow position:
               
chr18:55497719-55497358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
293, 286
               

               
Conread position:
               
178-531
               

               
Cow position:
               
chr18:49022720-49023073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
161, 151
               

               
Conread position:
               
182-447
               

               
Cow position:
               
chr18:51873695-51873959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
239, 15
               

               
Conread position:
               
182-474
               

               
Cow position:
               
chr18:55523302-55523594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
72, 67
               

               
Conread position:
               
182-538
               

               
Cow position:
               
chr18:42724594-42724238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
330, 334
               

               
Conread position:
               
182-569
               

               
Cow position:
               
chr18:43048734-43048347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 133
               

               
Conread position:
               
186-482
               

               
Cow position:
               
chr18:56316047-56316343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
230, 234
               

               
Conread position:
               
186-536
               

               
Cow position:
               
chr18:14454022-14453672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
52, 68
               

               
Conread position:
               
186-538
               

               
Cow position:
               
chr18:14453290-14452938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
119, 125
               

               
Conread position:
               
189-532
               

               
Cow position:
               
chr18:53636128-53635784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 232
               

               
Conread position:
               
189-536
               

               
Cow position:
               
chr18:56128037-56128385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 232
               

               
Conread position:
               
189-573
               

               
Cow position:
               
chr18:40324881-40324500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 10
               

               
Conread position:
               
192-573
               

               
Cow position:
               
chr18:50295192-50295572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
130, 125
               

               
Conread position:
               
245-562
               

               
Cow position:
               
chr18:41949375-41949058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
252-525
               

               
Cow position:
               
chr18:55442330-55442603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
151, 161
               

               
Conread position:
               
252-538
               

               
Cow position:
               
chr18:44239737-44240023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
253-541
               

               
Cow position:
               
chr18:44398458-44398170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
255-541
               

               
Cow position:
               
chr18:52427532-52427818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
166, 162
               

               
Conread position:
               
255-541
               

               
Cow position:
               
chr18:52432881-52433167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
50, 63
               

               
Conread position:
               
256-567
               

               
Cow position:
               
chr18:43023087-43022776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 76
               

               
Conread position:
               
259-541
               

               
Cow position:
               
chr18:43048741-43048459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
62, 58
               

               
Conread position:
               
260-548
               

               
Cow position:
               
chr18:51789904-51789617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
265-541
               

               
Cow position:
               
chr18:14453295-14453019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
60, 53
               

               
Conread position:
               
274-569
               

               
Cow position:
               
chr18:42744715-42744420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
148, 142
               

               
Conread position:
               
276-536
               

               
Cow position:
               
chr18:51873704-51873964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
33, 42
               

               
Conread position:
               
323-568
               

               
Cow position:
               
chr18:44184919-44184674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
356-537
               

               
Cow position:
               
chr18:51400280-51400461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
67, 60
               
Show alignments to all cow chromosomes.