Cow genome map


           Conread name:
           Ss1.1-rthg15_j20.5
        

               Conread position:
               1-538
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               332
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               70, 63
               

               Conread position:
               2-480
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               166, 197
               

               Conread position:
               3-538
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 12
               

               Conread position:
               6-438
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 71
               

               Conread position:
               6-471
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               29, 12
               

               Conread position:
               7-541
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               320
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               137, 109
               

               Conread position:
               8-356
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-399
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               8-453
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               273
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               64, 82
               

               Conread position:
               8-459
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               282
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               138, 208
               

               Conread position:
               8-484
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               244, 224
               

               Conread position:
               8-538
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-538
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               327
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               82, 5
               

               Conread position:
               8-541
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 49
               

               Conread position:
               8-541
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 156
               

               Conread position:
               8-569
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               354
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               224, 24
               

               Conread position:
               8-569
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               344
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               330, 323
               

               Conread position:
               9-532
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               313
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               47, 87
               

               Conread position:
               10-453
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               118, 122
               

               Conread position:
               10-531
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 154
               

               Conread position:
               10-538
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               14-538
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               328
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               150, 155
               

               Conread position:
               26-541
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               305
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               46, 33
               

               Conread position:
               47-568
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 289
               

               Conread position:
               84-568
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               291
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               331, 338
               

               Conread position:
               106-482
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 17
               

               Conread position:
               156-537
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               46, 35
               

               Conread position:
               182-538
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 42
               

               Conread position:
               191-540
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               135, 127
               

               Conread position:
               275-566
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               146, 129
               
Show alignments to all cow chromosomes.