Cow genome map
| Conread name: | Ss1.1-rthg15_j20.5 |
| Conread position: | 1-281 |
| Cow position: | chr21:34222821-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 55, 59 |
| Conread position: | 2-449 |
| Cow position: | chr21:34222988-34222541 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 87 |
| Conread position: | 2-483 |
| Cow position: | chr21:12659484-12659965 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 413, 421 |
| Conread position: | 2-493 |
| Cow position: | chr21:12608866-12608373 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 304 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 251, 247 |
| Conread position: | 2-498 |
| Cow position: | chr21:12608782-12608286 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-540 |
| Cow position: | chr21:12659400-12659938 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-537 |
| Cow position: | chr21:12659322-12659851 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 178 |
| Conread position: | 8-538 |
| Cow position: | chr21:12608608-12608078 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 313 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 415, 391 |
| Conread position: | 8-566 |
| Cow position: | chr21:12608692-12608134 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 344 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 48, 82 |
| Conread position: | 9-481 |
| Cow position: | chr21:12608439-12607967 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 331, 320 |
| Conread position: | 9-567 |
| Cow position: | chr21:12659239-12659797 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 50 |
| Conread position: | 11-498 |
| Cow position: | chr21:12659073-12659560 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 326, 315 |
| Conread position: | 13-567 |
| Cow position: | chr21:12658907-12659461 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 64 |
| Conread position: | 14-428 |
| Cow position: | chr21:12608350-12607936 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 249 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 42, 46 |
| Conread position: | 14-567 |
| Cow position: | chr21:12658992-12659545 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 314 |
| Conread position: | 14-567 |
| Cow position: | chr21:12659160-12659713 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 19-537 |
| Cow position: | chr21:34223136-34222621 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 65 |
| Conread position: | 19-540 |
| Cow position: | chr21:12658829-12659350 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 325 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 152, 139 |
| Conread position: | 23-484 |
| Cow position: | chr21:34223051-34222590 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 60 |
| Conread position: | 38-528 |
| Cow position: | chr21:12608914-12608424 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 271, 296 |
| Conread position: | 122-538 |
| Cow position: | chr21:12608914-12608498 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 217, 210 |
| Conread position: | 251-560 |
| Cow position: | chr21:34223075-34222766 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 68, 88 |
Show alignments to all cow chromosomes.