Cow genome map


           Conread name:
           Ss1.1-rthg15_j20.5
        

               Conread position:
               2-449
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 199
               

               Conread position:
               8-297
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               8-445
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 129
               

               Conread position:
               8-483
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               413, 408
               

               Conread position:
               8-528
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 231
               

               Conread position:
               8-531
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 118
               

               Conread position:
               8-538
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 58
               

               Conread position:
               8-538
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-538
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               321, 310
               

               Conread position:
               8-538
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 247
               

               Conread position:
               8-541
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 215
               

               Conread position:
               8-541
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               415, 409
               

               Conread position:
               8-558
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 303
               

               Conread position:
               8-567
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 303
               

               Conread position:
               8-567
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               545, 541
               

               Conread position:
               8-568
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               10-363
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               237
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               160, 6
               

               Conread position:
               10-524
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 322
               

               Conread position:
               11-568
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 221
               

               Conread position:
               16-538
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               21-252
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               35-568
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 38
               

               Conread position:
               47-566
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-566
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               304
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               106-456
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               235
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               199, 12
               

               Conread position:
               118-539
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               305, 63
               

               Conread position:
               120-568
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               287
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               136-541
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               26, 33
               

               Conread position:
               186-401
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               150, 131
               

               Conread position:
               201-498
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               105, 111
               

               Conread position:
               273-502
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               123, 114
               

               Conread position:
               273-541
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.