Cow genome map
| Conread name: | Ss1.1-rthg15_j20.5 |
| Conread position: | 2-449 |
| Cow position: | chr24:17070606-17071053 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 199 |
| Conread position: | 8-297 |
| Cow position: | chr24:17013233-17013521 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 79, 54 |
| Conread position: | 8-445 |
| Cow position: | chr24:17077940-17077503 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 129 |
| Conread position: | 8-483 |
| Cow position: | chr24:17035553-17035078 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 413, 408 |
| Conread position: | 8-528 |
| Cow position: | chr24:17035469-17034949 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 231 |
| Conread position: | 8-531 |
| Cow position: | chr24:17036309-17035786 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 118 |
| Conread position: | 8-538 |
| Cow position: | chr24:17035889-17035359 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 58 |
| Conread position: | 8-538 |
| Cow position: | chr24:17035973-17035443 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-538 |
| Cow position: | chr24:17036141-17035611 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 321, 310 |
| Conread position: | 8-538 |
| Cow position: | chr24:17036393-17035863 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 247 |
| Conread position: | 8-541 |
| Cow position: | chr24:17035637-17035104 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 215 |
| Conread position: | 8-541 |
| Cow position: | chr24:17036477-17035944 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 415, 409 |
| Conread position: | 8-558 |
| Cow position: | chr24:17035721-17035171 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 303 |
| Conread position: | 8-567 |
| Cow position: | chr24:17070444-17071003 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 299, 303 |
| Conread position: | 8-567 |
| Cow position: | chr24:17078108-17077549 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 545, 541 |
| Conread position: | 8-568 |
| Cow position: | chr24:17036225-17035665 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-363 |
| Cow position: | chr24:17013152-17013504 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 237 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 160, 6 |
| Conread position: | 10-524 |
| Cow position: | chr24:17078022-17077508 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 322 |
| Conread position: | 11-568 |
| Cow position: | chr24:17035802-17035245 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 221 |
| Conread position: | 16-538 |
| Cow position: | chr24:17036552-17036031 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 21-252 |
| Cow position: | chr24:16986428-16986659 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 35-568 |
| Cow position: | chr24:17036615-17036085 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 38 |
| Conread position: | 47-566 |
| Cow position: | chr24:17078153-17077634 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 70-566 |
| Cow position: | chr24:17070422-17070918 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 304 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 106-456 |
| Cow position: | chr24:17013165-17013513 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 235 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 199, 12 |
| Conread position: | 118-539 |
| Cow position: | chr24:17036616-17036198 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 305, 63 |
| Conread position: | 120-568 |
| Cow position: | chr24:17070388-17070836 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 287 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 42, 67 |
| Conread position: | 136-541 |
| Cow position: | chr24:17078400-17077995 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 186-401 |
| Cow position: | chr24:16986425-16986640 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 150, 131 |
| Conread position: | 201-498 |
| Cow position: | chr24:17013174-17013471 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 105, 111 |
| Conread position: | 273-502 |
| Cow position: | chr24:16986428-16986658 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 123, 114 |
| Conread position: | 273-541 |
| Cow position: | chr24:17013162-17013430 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.