Cow genome map
| Conread name: | Ss1.1-rthg15_j20.5 |
| Conread position: | 1-445 |
| Cow position: | chr25:33144995-33145436 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 169, 41 |
| Conread position: | 1-537 |
| Cow position: | chr25:34763140-34763673 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 318 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 316, 0 |
| Conread position: | 1-541 |
| Cow position: | chr25:326473-327021 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 336 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 19, 88 |
| Conread position: | 2-452 |
| Cow position: | chr25:33157242-33156792 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 85 |
| Conread position: | 2-481 |
| Cow position: | chr25:33299382-33299856 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 306 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 192, 199 |
| Conread position: | 2-519 |
| Cow position: | chr25:33144912-33145426 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 124 |
| Conread position: | 2-541 |
| Cow position: | chr25:33299130-33299669 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-558 |
| Cow position: | chr25:36801198-36801742 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 344 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 163, 138 |
| Conread position: | 4-390 |
| Cow position: | chr25:18642106-18641708 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 37, 183 |
| Conread position: | 6-483 |
| Cow position: | chr25:22235812-22236289 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 7-276 |
| Cow position: | chr25:36801695-36801962 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 73, 89 |
| Conread position: | 7-481 |
| Cow position: | chr25:33299303-33299777 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 295 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 416, 409 |
| Conread position: | 8-200 |
| Cow position: | chr25:327076-327268 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 52 |
| Conread position: | 8-222 |
| Cow position: | chr25:23420620-23420834 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-281 |
| Cow position: | chr25:326992-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 82 |
| Conread position: | 8-352 |
| Cow position: | chr25:346517-346861 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 235, 225 |
| Conread position: | 8-363 |
| Cow position: | chr25:23420452-23420807 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 235 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 79, 60 |
| Conread position: | 8-363 |
| Cow position: | chr25:36801612-36801967 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 236 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 329, 318 |
| Conread position: | 8-395 |
| Cow position: | chr25:36800952-36801339 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 159, 150 |
| Conread position: | 8-399 |
| Cow position: | chr25:22235898-22236289 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-403 |
| Cow position: | chr25:34714103-34714498 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 388, 379 |
| Conread position: | 8-435 |
| Cow position: | chr25:326398-326825 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 273 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 77, 55 |
| Conread position: | 8-475 |
| Cow position: | chr25:34433593-34434052 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 301, 12 |
| Conread position: | 8-481 |
| Cow position: | chr25:33298884-33299357 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 327, 318 |
| Conread position: | 8-493 |
| Cow position: | chr25:34447259-34447742 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 130 |
| Conread position: | 8-498 |
| Cow position: | chr25:34447091-34447581 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 240 |
| Conread position: | 8-507 |
| Cow position: | chr25:33305415-33304922 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 315 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 374, 18 |
| Conread position: | 8-519 |
| Cow position: | chr25:34763231-34763739 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 156 |
| Conread position: | 8-532 |
| Cow position: | chr25:326734-327264 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 334 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 49, 64 |
| Conread position: | 8-540 |
| Cow position: | chr25:34769971-34769439 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 156 |
| Conread position: | 8-541 |
| Cow position: | chr25:33157488-33156955 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 414, 402 |
| Conread position: | 8-541 |
| Cow position: | chr25:33299220-33299753 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 318 |
| Conread position: | 8-559 |
| Cow position: | chr25:33157404-33156852 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 156 |
| Conread position: | 8-565 |
| Cow position: | chr25:33298800-33299357 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 72 |
| Conread position: | 8-568 |
| Cow position: | chr25:34769803-34769243 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 247 |
| Conread position: | 8-568 |
| Cow position: | chr25:34770055-34769495 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 415, 409 |
| Conread position: | 9-276 |
| Cow position: | chr25:33127956-33128223 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 135, 125 |
| Conread position: | 9-325 |
| Cow position: | chr25:18642185-18641866 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 116, 166 |
| Conread position: | 9-519 |
| Cow position: | chr25:34762899-34763406 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 314 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 162, 155 |
| Conread position: | 9-539 |
| Cow position: | chr25:326567-327103 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 337 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 47, 81 |
| Conread position: | 9-541 |
| Cow position: | chr25:33298717-33299249 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 324 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 328, 319 |
| Conread position: | 9-541 |
| Cow position: | chr25:34732538-34732006 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 324 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 78, 59 |
| Conread position: | 10-364 |
| Cow position: | chr25:34714189-34714540 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 10-445 |
| Cow position: | chr25:33127789-33128224 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 154 |
| Conread position: | 10-475 |
| Cow position: | chr25:33305893-33305433 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 283 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 355, 70 |
| Conread position: | 10-537 |
| Cow position: | chr25:33298970-33299497 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 44 |
| Conread position: | 10-569 |
| Cow position: | chr25:34447009-34447568 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 74 |
| Conread position: | 11-498 |
| Cow position: | chr25:3664087-3664574 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 281 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 405, 410 |
| Conread position: | 11-541 |
| Cow position: | chr25:34769884-34769354 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 221 |
| Conread position: | 11-565 |
| Cow position: | chr25:25652260-25652814 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 332 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 324, 315 |
| Conread position: | 12-483 |
| Cow position: | chr25:23420372-23420843 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 147 |
| Conread position: | 12-502 |
| Cow position: | chr25:34769715-34769226 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 234, 220 |
| Conread position: | 12-541 |
| Cow position: | chr25:34732283-34731755 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 326 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 128, 102 |
| Conread position: | 13-267 |
| Cow position: | chr25:427319-427573 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 140, 148 |
| Conread position: | 13-540 |
| Cow position: | chr25:25652598-25653125 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 319 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 157, 151 |
| Conread position: | 13-558 |
| Cow position: | chr25:34447180-34447723 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 211 |
| Conread position: | 13-567 |
| Cow position: | chr25:33157567-33157013 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 14-437 |
| Cow position: | chr25:34763321-34763741 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 262 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 73, 66 |
| Conread position: | 14-479 |
| Cow position: | chr25:34762988-34763450 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 290 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 72, 66 |
| Conread position: | 14-498 |
| Cow position: | chr25:25652767-25653251 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 293 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 148, 144 |
| Conread position: | 14-501 |
| Cow position: | chr25:3664006-3664493 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 291 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 51, 76 |
| Conread position: | 14-519 |
| Cow position: | chr25:25652515-25653020 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 311 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 49, 76 |
| Conread position: | 14-538 |
| Cow position: | chr25:33299058-33299582 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 150 |
| Conread position: | 14-541 |
| Cow position: | chr25:33305971-33305451 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 314 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 325, 27 |
| Conread position: | 14-565 |
| Cow position: | chr25:33298638-33299189 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 73 |
| Conread position: | 14-566 |
| Cow position: | chr25:36800706-36801258 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 323, 319 |
| Conread position: | 14-569 |
| Cow position: | chr25:34732365-34731810 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 335 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 57, 44 |
| Conread position: | 16-396 |
| Cow position: | chr25:34732615-34732235 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 248 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 216, 221 |
| Conread position: | 16-481 |
| Cow position: | chr25:36801452-36801917 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 297 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 70, 61 |
| Conread position: | 16-519 |
| Cow position: | chr25:33127711-33128214 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 310 |
| Conread position: | 18-468 |
| Cow position: | chr25:36801538-36801986 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 291 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 385, 395 |
| Conread position: | 18-538 |
| Cow position: | chr25:33144844-33145361 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 325 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 161, 147 |
| Conread position: | 19-481 |
| Cow position: | chr25:36800543-36801005 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 283 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 85, 77 |
| Conread position: | 20-475 |
| Cow position: | chr25:36800880-36801335 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 289 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 391, 402 |
| Conread position: | 20-541 |
| Cow position: | chr25:36801372-36801893 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 321 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 151, 142 |
| Conread position: | 21-398 |
| Cow position: | chr25:414698-414324 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 315, 237 |
| Conread position: | 21-541 |
| Cow position: | chr25:23420228-23420733 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 332 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 138, 48 |
| Conread position: | 22-318 |
| Cow position: | chr25:366724-367020 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 192 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 222, 209 |
| Conread position: | 22-383 |
| Cow position: | chr25:34732105-34731743 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 172, 180 |
| Conread position: | 22-452 |
| Cow position: | chr25:346447-346876 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 260 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 187, 193 |
| Conread position: | 22-528 |
| Cow position: | chr25:34446937-34447443 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 399 |
| Conread position: | 23-447 |
| Cow position: | chr25:34433020-34433462 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 58, 63 |
| Conread position: | 23-481 |
| Cow position: | chr25:33298479-33298937 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 275 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 87, 78 |
| Conread position: | 24-368 |
| Cow position: | chr25:326924-327268 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 231, 223 |
| Conread position: | 25-537 |
| Cow position: | chr25:36800633-36801145 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 310 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 228, 224 |
| Conread position: | 25-538 |
| Cow position: | chr25:33298565-33299078 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 136 |
| Conread position: | 26-471 |
| Cow position: | chr25:34713869-34714314 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 136, 132 |
| Conread position: | 26-519 |
| Cow position: | chr25:34714037-34714530 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 303 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 34-482 |
| Cow position: | chr25:414763-414324 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 289 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 38-399 |
| Cow position: | chr25:34733994-34733633 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 49, 39 |
| Conread position: | 38-538 |
| Cow position: | chr25:33306447-33305951 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 309 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 133, 104 |
| Conread position: | 41-517 |
| Cow position: | chr25:34713800-34714277 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 225, 216 |
| Conread position: | 44-533 |
| Cow position: | chr25:23420320-23420809 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 188 |
| Conread position: | 44-569 |
| Cow position: | chr25:34770103-34769578 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 180 |
| Conread position: | 71-401 |
| Cow position: | chr25:18642207-18641874 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 108, 94 |
| Conread position: | 85-538 |
| Cow position: | chr25:34770146-34769693 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 288 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 86, 64 |
| Conread position: | 96-471 |
| Cow position: | chr25:34732617-34732244 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 249 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 158, 22 |
| Conread position: | 97-449 |
| Cow position: | chr25:326912-327265 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 14, 74 |
| Conread position: | 103-537 |
| Cow position: | chr25:34762825-34763256 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 233, 228 |
| Conread position: | 104-537 |
| Cow position: | chr25:36801372-36801805 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 64, 55 |
| Conread position: | 106-414 |
| Cow position: | chr25:366724-367032 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 106-482 |
| Cow position: | chr25:22235827-22236204 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 17 |
| Conread position: | 106-498 |
| Cow position: | chr25:346447-346839 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 107-537 |
| Cow position: | chr25:33298479-33298909 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 30 |
| Conread position: | 109-482 |
| Cow position: | chr25:414773-414407 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 241 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 110-352 |
| Cow position: | chr25:427332-427574 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 110-538 |
| Cow position: | chr25:34473510-34473935 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 211, 219 |
| Conread position: | 118-540 |
| Cow position: | chr25:33127729-33128151 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 303, 298 |
| Conread position: | 120-558 |
| Cow position: | chr25:33127646-33128085 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 39 |
| Conread position: | 122-402 |
| Cow position: | chr25:34733994-34733714 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 128-498 |
| Cow position: | chr25:4657444-4657074 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 37, 54 |
| Conread position: | 130-540 |
| Cow position: | chr25:326352-326762 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 128, 102 |
| Conread position: | 167-535 |
| Cow position: | chr25:34732632-34732264 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 19, 6 |
| Conread position: | 170-541 |
| Cow position: | chr25:34433503-34433871 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 71, 84 |
| Conread position: | 170-541 |
| Cow position: | chr25:34770145-34769774 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 81, 72 |
| Conread position: | 190-484 |
| Cow position: | chr25:366724-367018 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 42, 47 |
| Conread position: | 194-436 |
| Cow position: | chr25:427332-427574 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 206-498 |
| Cow position: | chr25:34733994-34733702 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 133, 115 |
| Conread position: | 254-568 |
| Cow position: | chr25:18642192-18641875 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 123, 173 |
| Conread position: | 256-539 |
| Cow position: | chr25:34762810-34763093 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 8 |
| Conread position: | 256-567 |
| Cow position: | chr25:23420364-23420675 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 166, 155 |
| Conread position: | 258-474 |
| Cow position: | chr25:34433003-34433219 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 164, 158 |
| Conread position: | 275-537 |
| Cow position: | chr25:22235829-22236091 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 146, 135 |
| Conread position: | 278-498 |
| Cow position: | chr25:427332-427552 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 190, 185 |
Show alignments to all cow chromosomes.