Cow genome map


           Conread name:
           Ss1.1-rthg15_j20.5
        

               Conread position:
               2-281
               

               Cow position:
               chr29:39627112-39626833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               9-532
               

               Cow position:
               chr29:39627354-39626835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               525
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 98
               

               Conread position:
               9-541
               

               Cow position:
               chr29:39627438-39626909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               537
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 77
               

               Conread position:
               10-539
               

               Cow position:
               chr29:39627521-39626995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               534
               

               Alignm identity:
               327
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               241, 245
               

               Conread position:
               47-541
               

               Cow position:
               chr29:39627568-39627077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               309
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               208, 202
               

               Conread position:
               51-541
               

               Cow position:
               chr29:39627648-39627161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               302
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               15, 8
               

               Conread position:
               70-474
               

               Cow position:
               chr29:39627212-39626808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               263
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               101, 78
               
Show alignments to all cow chromosomes.