Cow genome map


           Conread name:
           Ss1.1-rthg15_j20.5
        

               Conread position:
               1-541
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               338
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               235, 14
               

               Conread position:
               2-538
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 135
               

               Conread position:
               7-493
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               301
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               60, 71
               

               Conread position:
               8-391
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 26
               

               Conread position:
               8-483
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               306
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               79, 64
               

               Conread position:
               8-494
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 151
               

               Conread position:
               8-532
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               327
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               163, 126
               

               Conread position:
               8-541
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               328
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               232, 238
               

               Conread position:
               8-541
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               324
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-567
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               338
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               236, 230
               

               Conread position:
               8-567
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               339
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               236, 231
               

               Conread position:
               8-568
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 224
               

               Conread position:
               9-448
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 128
               

               Conread position:
               10-483
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               148, 68
               

               Conread position:
               11-481
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               286
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               60, 39
               

               Conread position:
               14-391
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               319, 29
               

               Conread position:
               21-414
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 47
               

               Conread position:
               22-567
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               319
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               38, 50
               

               Conread position:
               25-541
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 290
               

               Conread position:
               38-498
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               379, 363
               

               Conread position:
               170-541
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               205, 92
               

               Conread position:
               170-568
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               182-568
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               70, 50
               

               Conread position:
               254-568
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               67, 85
               
Show alignments to all cow chromosomes.