Cow genome map


           Conread name:
           Ss1.1-rthg15_j20.5
        

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               1-536
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-566
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               343
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               400, 332
               

               Conread position:
               7-225
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               161
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               7-568
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 0
               

               Conread position:
               8-399
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               343, 337
               

               Conread position:
               8-400
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               255
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               368, 0
               

               Conread position:
               8-459
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               237, 223
               

               Conread position:
               8-537
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 307
               

               Conread position:
               8-538
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               8-538
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               407, 414
               

               Conread position:
               8-539
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 45
               

               Conread position:
               8-541
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-541
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-541
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 158
               

               Conread position:
               8-559
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               8-568
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               460, 456
               

               Conread position:
               10-537
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 0
               

               Conread position:
               10-568
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               543, 28
               

               Conread position:
               11-498
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 45
               

               Conread position:
               11-568
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 110
               

               Conread position:
               12-307
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 240
               

               Conread position:
               12-390
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               12-483
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 116
               

               Conread position:
               12-484
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               439, 0
               

               Conread position:
               12-520
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 91
               

               Conread position:
               12-545
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               224, 219
               

               Conread position:
               13-570
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               529, 539
               

               Conread position:
               14-304
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               212, 0
               

               Conread position:
               14-446
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               219, 0
               

               Conread position:
               14-490
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               404, 409
               

               Conread position:
               14-498
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               323, 317
               

               Conread position:
               14-567
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 147
               

               Conread position:
               14-567
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 64
               

               Conread position:
               71-567
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               314
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               195, 68
               

               Conread position:
               86-498
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               315, 18
               

               Conread position:
               95-540
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 92
               
Show alignments to all cow chromosomes.