Cow genome map
Conread name: | Ss1.1-rthg15_j20.5 |
Conread position: | 2-399 |
Cow position: | chr7:8277995-8278392 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 240 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 79, 66 |
Conread position: | 2-448 |
Cow position: | chr7:3180432-3180877 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 95 |
Conread position: | 2-474 |
Cow position: | chr7:1439447-1439922 (view UCSC Genome Browser custom track) |
Alignm length: | 483 |
Alignm identity: | 297 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 11, 139 |
Conread position: | 2-541 |
Cow position: | chr7:3180180-3180719 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 420, 414 |
Conread position: | 7-289 |
Cow position: | chr7:1015175-1015457 (view UCSC Genome Browser custom track) |
Alignm length: | 283 |
Alignm identity: | 182 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 7-567 |
Cow position: | chr7:18390146-18390706 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 60 |
Conread position: | 8-314 |
Cow position: | chr7:11600782-11600476 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 191 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 147, 160 |
Conread position: | 8-396 |
Cow position: | chr7:1015092-1015482 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 246 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 376, 0 |
Conread position: | 8-396 |
Cow position: | chr7:11600866-11600479 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 249 |
Alignm E-value: | 7e-37 |
Alignm gaps (pig, cow): | 73, 79 |
Conread position: | 8-397 |
Cow position: | chr7:18390399-18390788 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 241 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 162, 156 |
Conread position: | 8-401 |
Cow position: | chr7:11434663-11434277 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 253 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 73, 57 |
Conread position: | 8-471 |
Cow position: | chr7:1014756-1015219 (view UCSC Genome Browser custom track) |
Alignm length: | 465 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 413, 408 |
Conread position: | 8-474 |
Cow position: | chr7:11600950-11600484 (view UCSC Genome Browser custom track) |
Alignm length: | 473 |
Alignm identity: | 300 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 58, 88 |
Conread position: | 8-480 |
Cow position: | chr7:1439793-1440263 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 294 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 87, 69 |
Conread position: | 8-485 |
Cow position: | chr7:8243623-8244097 (view UCSC Genome Browser custom track) |
Alignm length: | 480 |
Alignm identity: | 288 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 71, 53 |
Conread position: | 8-495 |
Cow position: | chr7:8243455-8243942 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 304 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 57, 71 |
Conread position: | 8-502 |
Cow position: | chr7:8325642-8326135 (view UCSC Genome Browser custom track) |
Alignm length: | 499 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 158 |
Conread position: | 8-532 |
Cow position: | chr7:42878787-42878263 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 57 |
Conread position: | 8-538 |
Cow position: | chr7:1014672-1015202 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 48, 64 |
Conread position: | 8-538 |
Cow position: | chr7:1439622-1440153 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 331 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 69, 18 |
Conread position: | 8-538 |
Cow position: | chr7:3179766-3180296 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 299, 307 |
Conread position: | 8-538 |
Cow position: | chr7:18390063-18390593 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 60, 113 |
Conread position: | 8-540 |
Cow position: | chr7:3180102-3180634 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 64 |
Conread position: | 8-540 |
Cow position: | chr7:3180270-3180800 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 472, 468 |
Conread position: | 8-541 |
Cow position: | chr7:1014840-1015373 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 336 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 164 |
Conread position: | 8-541 |
Cow position: | chr7:3179850-3180383 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 298, 313 |
Conread position: | 8-541 |
Cow position: | chr7:8325390-8325923 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 211 |
Conread position: | 8-541 |
Cow position: | chr7:8325474-8326007 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 240, 244 |
Conread position: | 8-541 |
Cow position: | chr7:11601034-11600501 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 331 |
Alignm E-value: | 1.96182e-44 |
Alignm gaps (pig, cow): | 387, 379 |
Conread position: | 8-541 |
Cow position: | chr7:42879123-42878590 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 413, 408 |
Conread position: | 8-542 |
Cow position: | chr7:18390231-18390765 (view UCSC Genome Browser custom track) |
Alignm length: | 540 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 78 |
Conread position: | 8-558 |
Cow position: | chr7:11601118-11600568 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 57 |
Conread position: | 8-559 |
Cow position: | chr7:42878955-42878404 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 230, 239 |
Conread position: | 8-567 |
Cow position: | chr7:11601202-11600643 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 358 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 83 |
Conread position: | 8-568 |
Cow position: | chr7:8277665-8278225 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 54 |
Conread position: | 8-569 |
Cow position: | chr7:8277413-8277974 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 348 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 213, 244 |
Conread position: | 8-569 |
Cow position: | chr7:8324970-8325531 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 79, 54 |
Conread position: | 8-574 |
Cow position: | chr7:1014426-1014986 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 301, 235 |
Conread position: | 8-574 |
Cow position: | chr7:3179934-3180500 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 472, 468 |
Conread position: | 8-575 |
Cow position: | chr7:8242952-8243518 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 339 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 238, 223 |
Conread position: | 9-452 |
Cow position: | chr7:8278170-8278611 (view UCSC Genome Browser custom track) |
Alignm length: | 449 |
Alignm identity: | 270 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 72, 64 |
Conread position: | 9-456 |
Cow position: | chr7:1015009-1015456 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 246, 217 |
Conread position: | 9-541 |
Cow position: | chr7:3180019-3180551 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 297, 306 |
Conread position: | 9-541 |
Cow position: | chr7:8324887-8325419 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 59 |
Conread position: | 9-565 |
Cow position: | chr7:42879206-42878650 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 414, 407 |
Conread position: | 10-519 |
Cow position: | chr7:1014926-1015435 (view UCSC Genome Browser custom track) |
Alignm length: | 511 |
Alignm identity: | 335 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 160, 154 |
Conread position: | 10-540 |
Cow position: | chr7:1014092-1014622 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 308 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 157, 171 |
Conread position: | 10-541 |
Cow position: | chr7:1014512-1015037 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 53 |
Conread position: | 10-567 |
Cow position: | chr7:8277583-8278140 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 358 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 65, 58 |
Conread position: | 14-480 |
Cow position: | chr7:1439716-1440178 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 289 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 230, 52 |
Conread position: | 14-483 |
Cow position: | chr7:8278091-8278558 (view UCSC Genome Browser custom track) |
Alignm length: | 474 |
Alignm identity: | 285 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 144, 137 |
Conread position: | 14-532 |
Cow position: | chr7:8325564-8326082 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 333 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 67, 55 |
Conread position: | 14-538 |
Cow position: | chr7:42878865-42878341 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-538 |
Cow position: | chr7:42879369-42878845 (view UCSC Genome Browser custom track) |
Alignm length: | 529 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 51 |
Conread position: | 14-541 |
Cow position: | chr7:8277335-8277862 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 325 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 152, 167 |
Conread position: | 14-541 |
Cow position: | chr7:8277839-8278366 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 327 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 72, 55 |
Conread position: | 14-541 |
Cow position: | chr7:8325228-8325755 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 335 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 83, 53 |
Conread position: | 14-568 |
Cow position: | chr7:8242874-8243427 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 344 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 67, 44 |
Conread position: | 14-569 |
Cow position: | chr7:8325312-8325867 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 361 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 139 |
Conread position: | 14-570 |
Cow position: | chr7:8325060-8325616 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 345 |
Alignm E-value: | 3.99931e-42 |
Alignm gaps (pig, cow): | 151, 123 |
Conread position: | 14-576 |
Cow position: | chr7:8243210-8243771 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 342 |
Alignm E-value: | 7e-38 |
Alignm gaps (pig, cow): | 65, 53 |
Conread position: | 15-568 |
Cow position: | chr7:11434824-11434278 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 345 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 232, 216 |
Conread position: | 20-480 |
Cow position: | chr7:8324730-8325189 (view UCSC Genome Browser custom track) |
Alignm length: | 464 |
Alignm identity: | 283 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 208, 221 |
Conread position: | 20-541 |
Cow position: | chr7:8277257-8277778 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 336 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 64, 43 |
Conread position: | 20-569 |
Cow position: | chr7:8243300-8243848 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 336 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 141, 80 |
Conread position: | 22-569 |
Cow position: | chr7:8324816-8325363 (view UCSC Genome Browser custom track) |
Alignm length: | 557 |
Alignm identity: | 351 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 54, 46 |
Conread position: | 23-567 |
Cow position: | chr7:42879276-42878732 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 400, 393 |
Conread position: | 24-568 |
Cow position: | chr7:18389995-18390539 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 329 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 132, 157 |
Conread position: | 28-539 |
Cow position: | chr7:8242804-8243315 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 306 |
Alignm E-value: | 9e-29 |
Alignm gaps (pig, cow): | 49, 41 |
Conread position: | 32-540 |
Cow position: | chr7:3179706-3180214 (view UCSC Genome Browser custom track) |
Alignm length: | 514 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 214, 199 |
Conread position: | 39-568 |
Cow position: | chr7:28846437-28846968 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 317 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 13, 57 |
Conread position: | 57-571 |
Cow position: | chr7:3179646-3180161 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 53 |
Conread position: | 63-475 |
Cow position: | chr7:1014229-1014641 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 252 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 179, 192 |
Conread position: | 74-567 |
Cow position: | chr7:1014654-1015147 (view UCSC Genome Browser custom track) |
Alignm length: | 498 |
Alignm identity: | 309 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 74, 79 |
Conread position: | 85-460 |
Cow position: | chr7:1438311-1438686 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 226 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 221, 236 |
Conread position: | 85-541 |
Cow position: | chr7:11601209-11600753 (view UCSC Genome Browser custom track) |
Alignm length: | 461 |
Alignm identity: | 280 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 11, 20 |
Conread position: | 103-538 |
Cow position: | chr7:8324729-8325164 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 268 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 56, 47 |
Conread position: | 103-569 |
Cow position: | chr7:8277256-8277722 (view UCSC Genome Browser custom track) |
Alignm length: | 471 |
Alignm identity: | 290 |
Alignm E-value: | 5e-35 |
Alignm gaps (pig, cow): | 66, 46 |
Conread position: | 166-474 |
Cow position: | chr7:1439445-1439756 (view UCSC Genome Browser custom track) |
Alignm length: | 316 |
Alignm identity: | 201 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 170, 144 |
Conread position: | 187-576 |
Cow position: | chr7:8324729-8325118 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 253 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 61, 45 |
Show alignments to all cow chromosomes.