Cow genome map
Conread name: | Ss1.1-rthg15_j20.5 |
Conread position: | 1-568 |
Cow position: | chr8:45201332-45201899 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 374 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 479, 475 |
Conread position: | 2-541 |
Cow position: | chr8:55580969-55581508 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 466, 460 |
Conread position: | 7-391 |
Cow position: | chr8:45201590-45201974 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 251 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 8-236 |
Cow position: | chr8:46817122-46817350 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 147 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 8-306 |
Cow position: | chr8:46817038-46817336 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 192 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 8-311 |
Cow position: | chr8:55581395-55581699 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 195 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 79, 58 |
Conread position: | 8-390 |
Cow position: | chr8:55581311-55581693 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 247 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 162, 156 |
Conread position: | 8-442 |
Cow position: | chr8:55581227-55581661 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 163, 143 |
Conread position: | 8-537 |
Cow position: | chr8:46816702-46817231 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 127 |
Conread position: | 8-538 |
Cow position: | chr8:45201171-45201701 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 307 |
Conread position: | 8-538 |
Cow position: | chr8:48407309-48406779 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 242, 247 |
Conread position: | 8-538 |
Cow position: | chr8:48407477-48406947 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 8-540 |
Cow position: | chr8:45201255-45201787 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 247, 241 |
Conread position: | 8-540 |
Cow position: | chr8:55580891-55581423 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 350 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 238, 223 |
Conread position: | 8-541 |
Cow position: | chr8:45201423-45201956 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 247, 240 |
Conread position: | 8-541 |
Cow position: | chr8:46816198-46816731 (view UCSC Genome Browser custom track) |
Alignm length: | 535 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 415, 408 |
Conread position: | 8-541 |
Cow position: | chr8:46816618-46817151 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 337, 343 |
Conread position: | 8-541 |
Cow position: | chr8:48406805-48406271 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 66 |
Conread position: | 8-541 |
Cow position: | chr8:55581059-55581592 (view UCSC Genome Browser custom track) |
Alignm length: | 536 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 414, 408 |
Conread position: | 8-567 |
Cow position: | chr8:45201087-45201646 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 61 |
Conread position: | 8-568 |
Cow position: | chr8:48407141-48406581 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 367 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 235, 224 |
Conread position: | 8-568 |
Cow position: | chr8:48407393-48406833 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 365 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 45 |
Conread position: | 9-525 |
Cow position: | chr8:55581144-55581660 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 337 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 246, 217 |
Conread position: | 10-538 |
Cow position: | chr8:46816116-46816644 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 298, 314 |
Conread position: | 10-547 |
Cow position: | chr8:46816788-46817325 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 173, 165 |
Conread position: | 10-558 |
Cow position: | chr8:46816452-46817000 (view UCSC Genome Browser custom track) |
Alignm length: | 551 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 454, 458 |
Conread position: | 10-566 |
Cow position: | chr8:46816368-46816924 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 62 |
Conread position: | 12-532 |
Cow position: | chr8:48407557-48407037 (view UCSC Genome Browser custom track) |
Alignm length: | 521 |
Alignm identity: | 327 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 14-428 |
Cow position: | chr8:46816960-46817374 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 257 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 294, 309 |
Conread position: | 14-539 |
Cow position: | chr8:45201009-45201534 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 466, 462 |
Conread position: | 14-539 |
Cow position: | chr8:46816540-46817065 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 330 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 420, 415 |
Conread position: | 14-541 |
Cow position: | chr8:46816036-46816563 (view UCSC Genome Browser custom track) |
Alignm length: | 531 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 43 |
Conread position: | 19-541 |
Cow position: | chr8:46815958-46816479 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 326 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 404, 7 |
Conread position: | 22-567 |
Cow position: | chr8:48407631-48407086 (view UCSC Genome Browser custom track) |
Alignm length: | 549 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 61 |
Conread position: | 25-541 |
Cow position: | chr8:45200936-45201452 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 86, 78 |
Conread position: | 31-562 |
Cow position: | chr8:46815882-46816416 (view UCSC Genome Browser custom track) |
Alignm length: | 537 |
Alignm identity: | 331 |
Alignm E-value: | 9.80909e-45 |
Alignm gaps (pig, cow): | 78, 287 |
Conread position: | 86-538 |
Cow position: | chr8:55580885-55581337 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 296 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 78 |
Conread position: | 97-537 |
Cow position: | chr8:55580728-55581168 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 273 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 25, 9 |
Conread position: | 114-480 |
Cow position: | chr8:6958074-6957708 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 227 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 14, 59 |
Conread position: | 122-566 |
Cow position: | chr8:45200949-45201393 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 282 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 54, 62 |
Conread position: | 189-569 |
Cow position: | chr8:48407630-48407252 (view UCSC Genome Browser custom track) |
Alignm length: | 381 |
Alignm identity: | 234 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 190-541 |
Cow position: | chr8:55580736-55581088 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 225 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 9, 41 |
Conread position: | 296-541 |
Cow position: | chr8:6958059-6957814 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 162 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 126, 120 |
Show alignments to all cow chromosomes.