Cow genome map

Conread name: Ss1.1-rthg21_c18.5

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 144
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 14, 7

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 73, 65

Conread position: 1-236
Cow position:
Alignm length: 236
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 199, 0

Conread position: 1-266
Cow position:
Alignm length: 267
Alignm identity: 178
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 25, 20

Conread position: 1-266
Cow position:
Alignm length: 266
Alignm identity: 169
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 206, 0

Conread position: 1-356
Cow position:
Alignm length: 361
Alignm identity: 229
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 74, 68

Conread position: 1-356
Cow position:
Alignm length: 357
Alignm identity: 227
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 276, 191

Conread position: 1-356
Cow position:
Alignm length: 358
Alignm identity: 219
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 155, 149

Conread position: 1-357
Cow position:
Alignm length: 359
Alignm identity: 218
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 25, 20

Conread position: 2-211
Cow position:
Alignm length: 210
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-211
Cow position:
Alignm length: 210
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 2-211
Cow position:
Alignm length: 210
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-211
Cow position:
Alignm length: 210
Alignm identity: 141
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 2-212
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 72, 66

Conread position: 2-240
Cow position:
Alignm length: 239
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 190, 0

Conread position: 2-252
Cow position:
Alignm length: 252
Alignm identity: 166
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 149, 157

Conread position: 2-265
Cow position:
Alignm length: 264
Alignm identity: 171
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 190, 0

Conread position: 2-266
Cow position:
Alignm length: 266
Alignm identity: 170
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 19

Conread position: 2-266
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 73, 65

Conread position: 2-266
Cow position:
Alignm length: 266
Alignm identity: 184
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 244, 190

Conread position: 2-268
Cow position:
Alignm length: 267
Alignm identity: 174
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 203, 0

Conread position: 2-285
Cow position:
Alignm length: 285
Alignm identity: 187
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 151, 157

Conread position: 2-350
Cow position:
Alignm length: 354
Alignm identity: 221
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 27

Conread position: 2-356
Cow position:
Alignm length: 356
Alignm identity: 219
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 265, 204

Conread position: 2-356
Cow position:
Alignm length: 358
Alignm identity: 229
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 244, 190

Conread position: 2-357
Cow position:
Alignm length: 360
Alignm identity: 225
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 7, 13

Conread position: 2-357
Cow position:
Alignm length: 359
Alignm identity: 224
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 156, 148

Conread position: 2-357
Cow position:
Alignm length: 359
Alignm identity: 228
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 266, 204

Conread position: 3-210
Cow position:
Alignm length: 210
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 18

Conread position: 3-211
Cow position:
Alignm length: 210
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 63

Conread position: 3-211
Cow position:
Alignm length: 210
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 71, 63

Conread position: 3-211
Cow position:
Alignm length: 209
Alignm identity: 139
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 3-211
Cow position:
Alignm length: 209
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-211
Cow position:
Alignm length: 209
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 3-236
Cow position:
Alignm length: 234
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 197, 0

Conread position: 3-264
Cow position:
Alignm length: 263
Alignm identity: 171
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 157, 151

Conread position: 3-266
Cow position:
Alignm length: 267
Alignm identity: 174
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 62

Conread position: 3-266
Cow position:
Alignm length: 264
Alignm identity: 174
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 189, 0

Conread position: 3-268
Cow position:
Alignm length: 267
Alignm identity: 180
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 245, 202

Conread position: 3-275
Cow position:
Alignm length: 274
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 32, 18

Conread position: 3-356
Cow position:
Alignm length: 357
Alignm identity: 219
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 155, 148

Conread position: 3-357
Cow position:
Alignm length: 356
Alignm identity: 215
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 276, 202

Conread position: 4-211
Cow position:
Alignm length: 209
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 147, 154

Conread position: 4-211
Cow position:
Alignm length: 209
Alignm identity: 143
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 199, 188

Conread position: 4-215
Cow position:
Alignm length: 216
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 84

Conread position: 4-216
Cow position:
Alignm length: 214
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 78

Conread position: 4-264
Cow position:
Alignm length: 261
Alignm identity: 171
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 196, 0

Conread position: 4-264
Cow position:
Alignm length: 261
Alignm identity: 170
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 196, 0

Conread position: 4-266
Cow position:
Alignm length: 263
Alignm identity: 167
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 188, 0

Conread position: 4-267
Cow position:
Alignm length: 265
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 245, 205

Conread position: 4-267
Cow position:
Alignm length: 264
Alignm identity: 169
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 209, 0

Conread position: 4-269
Cow position:
Alignm length: 267
Alignm identity: 177
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 184, 197

Conread position: 4-338
Cow position:
Alignm length: 337
Alignm identity: 214
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 259, 196

Conread position: 4-344
Cow position:
Alignm length: 342
Alignm identity: 208
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 283, 188

Conread position: 4-350
Cow position:
Alignm length: 350
Alignm identity: 224
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 244, 188

Conread position: 4-356
Cow position:
Alignm length: 354
Alignm identity: 215
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 273, 188

Conread position: 4-357
Cow position:
Alignm length: 357
Alignm identity: 226
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 22, 5

Conread position: 13-226
Cow position:
Alignm length: 216
Alignm identity: 147
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 61, 54

Conread position: 13-349
Cow position:
Alignm length: 340
Alignm identity: 217
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 222, 187

Conread position: 13-356
Cow position:
Alignm length: 348
Alignm identity: 224
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 13, 8

Conread position: 13-356
Cow position:
Alignm length: 348
Alignm identity: 226
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 13, 8

Conread position: 13-357
Cow position:
Alignm length: 348
Alignm identity: 216
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 147, 154

Conread position: 13-357
Cow position:
Alignm length: 346
Alignm identity: 212
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 264, 196

Conread position: 14-280
Cow position:
Alignm length: 268
Alignm identity: 176
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 54

Conread position: 16-266
Cow position:
Alignm length: 251
Alignm identity: 165
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 176, 0

Conread position: 24-357
Cow position:
Alignm length: 337
Alignm identity: 211
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 244, 168

Conread position: 25-202
Cow position:
Alignm length: 178
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 25-204
Cow position:
Alignm length: 180
Alignm identity: 122
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 25-211
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 25-233
Cow position:
Alignm length: 209
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 176, 0

Conread position: 25-262
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 183, 0

Conread position: 25-266
Cow position:
Alignm length: 242
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 167, 0

Conread position: 25-266
Cow position:
Alignm length: 242
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 167, 0

Conread position: 25-280
Cow position:
Alignm length: 256
Alignm identity: 167
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 167, 0

Conread position: 25-321
Cow position:
Alignm length: 298
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 252, 184

Conread position: 25-356
Cow position:
Alignm length: 335
Alignm identity: 210
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 243, 180

Conread position: 25-356
Cow position:
Alignm length: 333
Alignm identity: 208
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 252, 167

Conread position: 25-357
Cow position:
Alignm length: 335
Alignm identity: 208
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 213, 175

Conread position: 25-357
Cow position:
Alignm length: 337
Alignm identity: 210
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 259, 167

Conread position: 27-265
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 229, 165

Conread position: 27-265
Cow position:
Alignm length: 239
Alignm identity: 159
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 165, 0

Conread position: 28-350
Cow position:
Alignm length: 327
Alignm identity: 211
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 259, 179

Conread position: 30-357
Cow position:
Alignm length: 331
Alignm identity: 211
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 173, 162

Show alignments to all cow chromosomes.