Cow genome map
| Conread name: | Ss1.1-rthg21_c18.5 |
| Conread position: | 1-264 |
| Cow position: | chr22:12431259-12431000 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 241, 191 |
| Conread position: | 1-350 |
| Cow position: | chr22:12458127-12457781 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 276, 206 |
| Conread position: | 1-350 |
| Cow position: | chr22:12476412-12476066 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 219 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 27, 8 |
| Conread position: | 1-357 |
| Cow position: | chr22:12431679-12431326 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 1-357 |
| Cow position: | chr22:12431931-12431578 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 73, 68 |
| Conread position: | 1-357 |
| Cow position: | chr22:12475908-12475555 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 276, 191 |
| Conread position: | 1-357 |
| Cow position: | chr22:12499351-12499704 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 222 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 276, 191 |
| Conread position: | 2-350 |
| Cow position: | chr22:12498848-12499193 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 7 |
| Conread position: | 3-266 |
| Cow position: | chr22:12399781-12399522 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 66 |
| Conread position: | 3-269 |
| Cow position: | chr22:12475654-12475392 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 12, 6 |
| Conread position: | 3-360 |
| Cow position: | chr22:12458545-12458191 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 4-211 |
| Cow position: | chr22:12499270-12499477 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 5 |
| Conread position: | 4-266 |
| Cow position: | chr22:12431088-12430830 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 238, 188 |
| Conread position: | 4-321 |
| Cow position: | chr22:12385604-12385288 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 17 |
| Conread position: | 11-356 |
| Cow position: | chr22:12431753-12431411 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 139, 144 |
| Conread position: | 15-266 |
| Cow position: | chr22:12476062-12475815 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 177, 0 |
| Conread position: | 25-211 |
| Cow position: | chr22:12385329-12385143 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 121, 134 |
| Conread position: | 25-356 |
| Cow position: | chr22:12399591-12399263 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 21, 25 |
| Conread position: | 25-357 |
| Cow position: | chr22:12431403-12431074 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 213 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 64, 59 |
| Conread position: | 26-233 |
| Cow position: | chr22:12475967-12475764 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 136, 125 |
Show alignments to all cow chromosomes.