Cow genome map

Conread name: Ss1.1-rthg21_c18.5

Conread position: 1-197
Cow position: chr23:24560325-24560128 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 137
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 190, 0

Conread position: 1-203
Cow position: chr23:25626676-25626878 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 69

Conread position: 1-266
Cow position: chr23:25626760-25627021 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 178
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 8

Conread position: 1-348
Cow position: chr23:24522507-24522163 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 234
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 276, 199

Conread position: 1-357
Cow position: chr23:24522591-24522238 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 225
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 149, 158

Conread position: 1-357
Cow position: chr23:25660296-25660649 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 220
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 276, 191

Conread position: 2-209
Cow position: chr23:25626260-25626467 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 13, 7

Conread position: 2-357
Cow position: chr23:24547016-24546664 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 229
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 147, 153

Conread position: 3-203
Cow position: chr23:24654180-24654380 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 155, 148

Conread position: 3-211
Cow position: chr23:24560491-24560283 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 3-356
Cow position: chr23:24547099-24546749 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 155, 148

Conread position: 3-357
Cow position: chr23:24547267-24546916 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 224
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 152, 148

Conread position: 4-210
Cow position: chr23:25660467-25660673 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-211
Cow position: chr23:24626540-24626745 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 183, 0

Conread position: 4-357
Cow position: chr23:24560910-24560560 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 213
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 273, 183

Conread position: 4-357
Cow position: chr23:25626514-25626861 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 226
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 273, 67

Conread position: 10-357
Cow position: chr23:24522829-24522490 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 227
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 148, 42

Conread position: 11-266
Cow position: chr23:24626463-24626714 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 174
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 94, 101

Conread position: 11-357
Cow position: chr23:24639539-24639882 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 224
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 140, 144

Conread position: 13-357
Cow position: chr23:24560565-24560224 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 221
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 264, 194

Conread position: 13-357
Cow position: chr23:24560733-24560392 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 219
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 146, 138

Conread position: 13-357
Cow position: chr23:24560817-24560476 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 209
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 264, 179

Conread position: 13-357
Cow position: chr23:25660224-25660565 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 225
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 148, 138

Conread position: 13-365
Cow position: chr23:25626187-25626536 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 218
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 13, 8

Conread position: 24-275
Cow position: chr23:24560386-24560139 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 169
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 182, 0

Conread position: 24-357
Cow position: chr23:24560638-24560308 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 219
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 253, 182

Conread position: 25-357
Cow position: chr23:24626309-24626638 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 205
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 254, 179

Conread position: 25-357
Cow position: chr23:25698571-25698242 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 214
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 114, 128

Conread position: 26-356
Cow position: chr23:24535791-24535464 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 205
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 251, 166

Conread position: 31-625
Cow position: chr23:24521971-24521381 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 177

Conread position: 34-358
Cow position: chr23:24547320-24546999 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 213
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 124, 117

Show alignments to all cow chromosomes.