Cow genome map
| Conread name: | Ss1.1-rthg21_c18.5 |
| Conread position: | 1-264 |
| Cow position: | chr25:23420611-23420870 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 200, 0 |
| Conread position: | 1-321 |
| Cow position: | chr25:18642195-18641875 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 96, 89 |
| Conread position: | 2-266 |
| Cow position: | chr25:23420444-23420704 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 2-349 |
| Cow position: | chr25:34769643-34769299 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 220 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 275, 190 |
| Conread position: | 2-357 |
| Cow position: | chr25:34769727-34769375 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 7, 13 |
| Conread position: | 3-356 |
| Cow position: | chr25:34770062-34769712 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 228 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 23, 18 |
| Conread position: | 3-357 |
| Cow position: | chr25:34713928-34714279 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 98, 81 |
| Conread position: | 4-275 |
| Cow position: | chr25:23420530-23420797 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 188, 0 |
| Conread position: | 4-357 |
| Cow position: | chr25:33127865-33128215 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 22, 17 |
| Conread position: | 4-357 |
| Cow position: | chr25:33157242-33156892 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 273, 188 |
| Conread position: | 4-357 |
| Cow position: | chr25:33157410-33157060 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 273, 186 |
| Conread position: | 11-266 |
| Cow position: | chr25:33298633-33298884 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 15, 10 |
| Conread position: | 13-276 |
| Cow position: | chr25:33145170-33145429 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 234, 200 |
| Conread position: | 24-357 |
| Cow position: | chr25:33157474-33157144 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 208 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 253, 176 |
| Conread position: | 25-356 |
| Cow position: | chr25:34769788-34769460 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 252, 180 |
| Conread position: | 25-357 |
| Cow position: | chr25:33127802-33128131 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 64, 52 |
| Conread position: | 25-357 |
| Cow position: | chr25:34447190-34447519 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 81, 87 |
| Conread position: | 25-358 |
| Cow position: | chr25:34446938-34447268 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 252, 180 |
| Conread position: | 25-365 |
| Cow position: | chr25:36800883-36801220 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 212 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 252, 167 |
| Conread position: | 26-217 |
| Cow position: | chr25:33305401-33305212 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 165, 85 |
| Conread position: | 28-357 |
| Cow position: | chr25:34770121-34769795 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 240, 164 |
| Conread position: | 39-357 |
| Cow position: | chr25:33127732-33128047 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 237, 153 |
| Conread position: | 43-500 |
| Cow position: | chr25:18641406-18640961 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 370, 110 |
| Conread position: | 496-624 |
| Cow position: | chr25:18639826-18639697 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.