Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rthg23_l8.5
        

               Conread position:
               1-95
               

               Cow position:
               chr1:81579574-81579667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               1-100
               

               Cow position:
               chr1:98348496-98348397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-120
               

               Cow position:
               chr1:30504281-30504397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               1-120
               

               Cow position:
               chr1:51044421-51044540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-127
               

               Cow position:
               chr1:77648127-77647998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 65
               

               Conread position:
               1-155
               

               Cow position:
               chr1:89395403-89395566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               1-161
               

               Cow position:
               chr1:85361666-85361831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               1-163
               

               Cow position:
               chr1:92370551-92370386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               83, 105
               

               Conread position:
               1-164
               

               Cow position:
               chr1:98619016-98619186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 115
               

               Conread position:
               1-166
               

               Cow position:
               chr1:46940051-46939884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               1-166
               

               Cow position:
               chr1:51628691-51628522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 117
               

               Conread position:
               1-167
               

               Cow position:
               chr1:81180169-81179996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               83, 169
               

               Conread position:
               1-168
               

               Cow position:
               chr1:95327342-95327173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               1-169
               

               Cow position:
               chr1:15311679-15311848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 53
               

               Conread position:
               1-172
               

               Cow position:
               chr1:4027672-4027851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               84, 135
               

               Conread position:
               1-172
               

               Cow position:
               chr1:102113298-102113122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               120, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr1:87216273-87216443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               120, 11
               

               Conread position:
               1-174
               

               Cow position:
               chr1:49839318-49839490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               103, 40
               

               Conread position:
               1-177
               

               Cow position:
               chr1:59192834-59192651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               41, 144
               

               Conread position:
               1-178
               

               Cow position:
               chr1:20287925-20288103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               122, 112
               

               Conread position:
               1-180
               

               Cow position:
               chr1:26159621-26159441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               161, 0
               

               Conread position:
               1-185
               

               Cow position:
               chr1:39100865-39101052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               5, 129
               

               Conread position:
               1-187
               

               Cow position:
               chr1:83593997-83593805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               83, 28
               

               Conread position:
               1-187
               

               Cow position:
               chr1:92607109-92606920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               84, 154
               

               Conread position:
               1-187
               

               Cow position:
               chr1:99118196-99118374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               137, 116
               

               Conread position:
               1-188
               

               Cow position:
               chr1:28516914-28516727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               6, 107
               

               Conread position:
               1-191
               

               Cow position:
               chr1:97284567-97284375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               84, 151
               

               Conread position:
               1-192
               

               Cow position:
               chr1:82861585-82861781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               1-194
               

               Cow position:
               chr1:34000716-34000913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               86, 161
               

               Conread position:
               1-197
               

               Cow position:
               chr1:8532405-8532208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 53
               

               Conread position:
               1-198
               

               Cow position:
               chr1:41004557-41004354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               162
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-203
               

               Cow position:
               chr1:53671939-53671726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               43, 92
               

               Conread position:
               1-204
               

               Cow position:
               chr1:46885905-46886104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               1-204
               

               Cow position:
               chr1:68995982-68996192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               82, 166
               

               Conread position:
               1-207
               

               Cow position:
               chr1:12596091-12595886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               120, 42
               

               Conread position:
               1-207
               

               Cow position:
               chr1:71952898-71953093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               180, 35
               

               Conread position:
               1-210
               

               Cow position:
               chr1:3340748-3340956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               181, 102
               

               Conread position:
               1-210
               

               Cow position:
               chr1:31235121-31234913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 157
               

               Conread position:
               1-210
               

               Cow position:
               chr1:79663855-79663655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               1-212
               

               Cow position:
               chr1:22448776-22448561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               103, 46
               

               Conread position:
               1-212
               

               Cow position:
               chr1:55163733-55163939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               169, 36
               

               Conread position:
               1-212
               

               Cow position:
               chr1:64421141-64421351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               81, 112
               

               Conread position:
               1-212
               

               Cow position:
               chr1:69415907-69415689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               96, 109
               

               Conread position:
               1-212
               

               Cow position:
               chr1:78783357-78783568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               83, 40
               

               Conread position:
               1-212
               

               Cow position:
               chr1:95654905-95654693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               120, 164
               

               Conread position:
               1-213
               

               Cow position:
               chr1:29671713-29671500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               55, 47
               

               Conread position:
               1-213
               

               Cow position:
               chr1:98557973-98557763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 115
               

               Conread position:
               1-214
               

               Cow position:
               chr1:11873546-11873339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               119, 37
               

               Conread position:
               1-214
               

               Cow position:
               chr1:53540201-53540413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               22, 119
               

               Conread position:
               1-215
               

               Cow position:
               chr1:47008841-47009056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               121, 54
               

               Conread position:
               1-215
               

               Cow position:
               chr1:51818752-51818965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               84, 31
               

               Conread position:
               1-215
               

               Cow position:
               chr1:56674319-56674103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               89, 49
               

               Conread position:
               1-216
               

               Cow position:
               chr1:31341243-31341029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               84, 133
               

               Conread position:
               1-216
               

               Cow position:
               chr1:58419743-58419960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               84, 132
               

               Conread position:
               1-216
               

               Cow position:
               chr1:61725302-61725090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               89, 115
               

               Conread position:
               1-221
               

               Cow position:
               chr1:80869917-80870144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               59, 170
               

               Conread position:
               1-227
               

               Cow position:
               chr1:5858880-5858652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 46
               

               Conread position:
               1-229
               

               Cow position:
               chr1:73561839-73561610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               83, 25
               

               Conread position:
               1-230
               

               Cow position:
               chr1:76222880-76222650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 37
               

               Conread position:
               1-235
               

               Cow position:
               chr1:45535512-45535750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               121, 176
               

               Conread position:
               1-235
               

               Cow position:
               chr1:70028389-70028623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               121, 167
               

               Conread position:
               1-236
               

               Cow position:
               chr1:43380218-43379980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               1-236
               

               Cow position:
               chr1:99136620-99136386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               104, 44
               

               Conread position:
               1-239
               

               Cow position:
               chr1:98562970-98563209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               121, 102
               

               Conread position:
               1-246
               

               Cow position:
               chr1:90640835-90641090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               83, 237
               

               Conread position:
               1-248
               

               Cow position:
               chr1:82443646-82443399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               1-252
               

               Cow position:
               chr1:71643853-71643603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               84, 131
               

               Conread position:
               1-254
               

               Cow position:
               chr1:24235710-24235457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               121, 148
               

               Conread position:
               1-254
               

               Cow position:
               chr1:55260620-55260373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               92, 53
               

               Conread position:
               1-255
               

               Cow position:
               chr1:57639710-57639452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               119, 76
               

               Conread position:
               1-256
               

               Cow position:
               chr1:40246869-40246613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               14, 143
               

               Conread position:
               1-261
               

               Cow position:
               chr1:40926542-40926807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               73, 131
               

               Conread position:
               1-262
               

               Cow position:
               chr1:80336436-80336179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               85, 115
               

               Conread position:
               1-262
               

               Cow position:
               chr1:88618404-88618666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               83, 56
               

               Conread position:
               1-262
               

               Cow position:
               chr1:95765279-95765022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               6, 90
               

               Conread position:
               1-263
               

               Cow position:
               chr1:6103106-6102832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-263
               

               Cow position:
               chr1:63138649-63138912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               83, 37
               

               Conread position:
               1-263
               

               Cow position:
               chr1:63390963-63390696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               88, 40
               

               Conread position:
               1-264
               

               Cow position:
               chr1:1165412-1165671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               1-264
               

               Cow position:
               chr1:7186598-7186860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               30, 125
               

               Conread position:
               1-264
               

               Cow position:
               chr1:11659454-11659719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               84, 46
               

               Conread position:
               1-264
               

               Cow position:
               chr1:23488702-23488434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               83, 174
               

               Conread position:
               1-264
               

               Cow position:
               chr1:42138677-42138930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               83, 53
               

               Conread position:
               1-264
               

               Cow position:
               chr1:66138127-66138390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               64, 42
               

               Conread position:
               1-264
               

               Cow position:
               chr1:68845675-68845418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               89, 46
               

               Conread position:
               1-264
               

               Cow position:
               chr1:74940005-74940272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               5, 176
               

               Conread position:
               1-264
               

               Cow position:
               chr1:86672418-86672145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               121, 164
               

               Conread position:
               1-264
               

               Cow position:
               chr1:91039366-91039102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               85, 115
               

               Conread position:
               1-264
               

               Cow position:
               chr1:92369539-92369810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 181
               

               Conread position:
               1-265
               

               Cow position:
               chr1:11226435-11226173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               194
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               81, 120
               

               Conread position:
               1-265
               

               Cow position:
               chr1:80899918-80900193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               74, 166
               

               Conread position:
               1-265
               

               Cow position:
               chr1:98310872-98311145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               76, 182
               

               Conread position:
               1-266
               

               Cow position:
               chr1:6941276-6941542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               121, 35
               

               Conread position:
               1-266
               

               Cow position:
               chr1:6958689-6958955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               121, 35
               

               Conread position:
               1-266
               

               Cow position:
               chr1:28176810-28177078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               80, 174
               

               Conread position:
               1-266
               

               Cow position:
               chr1:36931970-36932228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               121, 30
               

               Conread position:
               1-266
               

               Cow position:
               chr1:37707158-37706903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               75, 103
               

               Conread position:
               1-266
               

               Cow position:
               chr1:39510240-39509984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               64, 32
               

               Conread position:
               1-266
               

               Cow position:
               chr1:42874136-42873876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               181, 44
               

               Conread position:
               1-266
               

               Cow position:
               chr1:56477405-56477666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               121, 28
               

               Conread position:
               1-266
               

               Cow position:
               chr1:64251241-64250978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               120, 45
               

               Conread position:
               1-266
               

               Cow position:
               chr1:79278635-79278373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               119, 40
               

               Conread position:
               1-266
               

               Cow position:
               chr1:95215375-95215116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               89, 161
               

               Conread position:
               1-266
               

               Cow position:
               chr1:100800166-100800427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               121, 54
               

               Conread position:
               1-267
               

               Cow position:
               chr1:6867670-6867390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               1-267
               

               Cow position:
               chr1:13810459-13810722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               83, 121
               

               Conread position:
               1-267
               

               Cow position:
               chr1:31765586-31765298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               1-267
               

               Cow position:
               chr1:51654221-51654499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               1-267
               

               Cow position:
               chr1:63596249-63595979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               85, 76
               

               Conread position:
               1-267
               

               Cow position:
               chr1:71748196-71747945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               1-267
               

               Cow position:
               chr1:72103657-72103925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               83, 38
               

               Conread position:
               1-267
               

               Cow position:
               chr1:73584591-73584335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               1-267
               

               Cow position:
               chr1:80988157-80988422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               83, 38
               

               Conread position:
               1-267
               

               Cow position:
               chr1:84906257-84905988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               88, 38
               

               Conread position:
               1-267
               

               Cow position:
               chr1:90864489-90864218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               83, 161
               

               Conread position:
               1-268
               

               Cow position:
               chr1:61175994-61176254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               83, 43
               

               Conread position:
               1-268
               

               Cow position:
               chr1:78091847-78092113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               1-269
               

               Cow position:
               chr1:92963209-92963472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 39
               

               Conread position:
               1-271
               

               Cow position:
               chr1:4374528-4374258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               89, 21
               

               Conread position:
               1-273
               

               Cow position:
               chr1:6788479-6788202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               118, 166
               

               Conread position:
               1-273
               

               Cow position:
               chr1:55146612-55146879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               121, 70
               

               Conread position:
               1-278
               

               Cow position:
               chr1:41252592-41252324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               46, 84
               

               Conread position:
               1-278
               

               Cow position:
               chr1:43872524-43872234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               121, 262
               

               Conread position:
               1-280
               

               Cow position:
               chr1:81913341-81913067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               169, 99
               

               Conread position:
               1-283
               

               Cow position:
               chr1:49795815-49796083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               180, 49
               

               Conread position:
               1-283
               

               Cow position:
               chr1:66430107-66430382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               83, 96
               

               Conread position:
               1-283
               

               Cow position:
               chr1:81563543-81563836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               1-284
               

               Cow position:
               chr1:1829512-1829235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               84, 53
               

               Conread position:
               1-285
               

               Cow position:
               chr1:89076826-89076540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               89, 69
               

               Conread position:
               1-290
               

               Cow position:
               chr1:7350349-7350646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               116, 99
               

               Conread position:
               1-291
               

               Cow position:
               chr1:4539628-4539325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               85, 289
               

               Conread position:
               1-291
               

               Cow position:
               chr1:91816963-91816674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               1-293
               

               Cow position:
               chr1:5135881-5135609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               1-293
               

               Cow position:
               chr1:25281865-25281556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               103, 33
               

               Conread position:
               1-293
               

               Cow position:
               chr1:44125829-44125537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               121, 31
               

               Conread position:
               1-293
               

               Cow position:
               chr1:45289063-45288770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               89, 44
               

               Conread position:
               1-293
               

               Cow position:
               chr1:62291875-62291600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               110, 30
               

               Conread position:
               1-293
               

               Cow position:
               chr1:81613196-81613490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 149
               

               Conread position:
               1-293
               

               Cow position:
               chr1:84255565-84255868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 115
               

               Conread position:
               1-293
               

               Cow position:
               chr1:85028770-85029055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               185, 28
               

               Conread position:
               1-293
               

               Cow position:
               chr1:100393354-100393062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               220, 121
               

               Conread position:
               1-301
               

               Cow position:
               chr1:19568661-19568957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               120, 18
               

               Conread position:
               1-302
               

               Cow position:
               chr1:80363386-80363088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               84, 156
               

               Conread position:
               1-305
               

               Cow position:
               chr1:31414148-31413859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               137, 38
               

               Conread position:
               1-306
               

               Cow position:
               chr1:64678508-64678805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               1-323
               

               Cow position:
               chr1:98461101-98461415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               180, 76
               

               Conread position:
               1-325
               

               Cow position:
               chr1:4414397-4414081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               121, 30
               

               Conread position:
               1-326
               

               Cow position:
               chr1:24542771-24542437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               110, 36
               

               Conread position:
               1-328
               

               Cow position:
               chr1:52994834-52995162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               169, 91
               

               Conread position:
               1-328
               

               Cow position:
               chr1:71253744-71253416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               237
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               121, 44
               

               Conread position:
               1-328
               

               Cow position:
               chr1:82337974-82337646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               121, 179
               

               Conread position:
               1-337
               

               Cow position:
               chr1:33331278-33330946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               242
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               114, 162
               

               Conread position:
               1-337
               

               Cow position:
               chr1:93043836-93044162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 111
               

               Conread position:
               1-341
               

               Cow position:
               chr1:89342182-89341829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               121, 51
               

               Conread position:
               1-342
               

               Cow position:
               chr1:53308582-53308240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               236
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               1-345
               

               Cow position:
               chr1:10655288-10655633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               85, 180
               

               Conread position:
               1-347
               

               Cow position:
               chr1:52488152-52487820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               84, 38
               

               Conread position:
               1-347
               

               Cow position:
               chr1:56229065-56229388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               234, 38
               

               Conread position:
               1-347
               

               Cow position:
               chr1:79165280-79164924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               244
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               23, 167
               

               Conread position:
               1-349
               

               Cow position:
               chr1:22728858-22729215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 291
               

               Conread position:
               1-349
               

               Cow position:
               chr1:42968507-42968156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               240
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               83, 117
               

               Conread position:
               1-352
               

               Cow position:
               chr1:52039447-52039796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 40
               

               Conread position:
               1-355
               

               Cow position:
               chr1:34686005-34686337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               114, 30
               

               Conread position:
               1-355
               

               Cow position:
               chr1:71079146-71078796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 43
               

               Conread position:
               1-356
               

               Cow position:
               chr1:13637860-13637498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               253
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               103, 42
               

               Conread position:
               1-356
               

               Cow position:
               chr1:16767274-16766919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               114, 85
               

               Conread position:
               1-356
               

               Cow position:
               chr1:26179004-26178641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               83, 115
               

               Conread position:
               1-356
               

               Cow position:
               chr1:43389237-43388887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 33
               

               Conread position:
               1-356
               

               Cow position:
               chr1:49433454-49433094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               85, 56
               

               Conread position:
               1-356
               

               Cow position:
               chr1:53520717-53521081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               54, 28
               

               Conread position:
               1-356
               

               Cow position:
               chr1:54478135-54478483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               121, 30
               

               Conread position:
               1-356
               

               Cow position:
               chr1:61735628-61735281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               83, 133
               

               Conread position:
               1-356
               

               Cow position:
               chr1:71227887-71228262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               86, 219
               

               Conread position:
               1-356
               

               Cow position:
               chr1:74956213-74955865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               83, 44
               

               Conread position:
               1-356
               

               Cow position:
               chr1:89937550-89937211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               251
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               30, 106
               

               Conread position:
               1-356
               

               Cow position:
               chr1:93528501-93528861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               252
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               83, 183
               

               Conread position:
               1-356
               

               Cow position:
               chr1:97611842-97611497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               91, 40
               

               Conread position:
               1-356
               

               Cow position:
               chr1:98030725-98031084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               105, 119
               

               Conread position:
               1-356
               

               Cow position:
               chr1:99609176-99609534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               83, 42
               

               Conread position:
               1-357
               

               Cow position:
               chr1:635002-635365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               249
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               83, 35
               

               Conread position:
               1-359
               

               Cow position:
               chr1:95499685-95499329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               121, 74
               

               Conread position:
               1-360
               

               Cow position:
               chr1:679801-679434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               84, 148
               

               Conread position:
               1-360
               

               Cow position:
               chr1:31348630-31348264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               83, 38
               

               Conread position:
               1-360
               

               Cow position:
               chr1:69539508-69539856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               121, 36
               

               Conread position:
               1-360
               

               Cow position:
               chr1:95100772-95101122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               83, 53
               

               Conread position:
               1-361
               

               Cow position:
               chr1:12464853-12464494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               253
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               105, 42
               

               Conread position:
               1-365
               

               Cow position:
               chr1:11914067-11913699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               83, 46
               

               Conread position:
               1-366
               

               Cow position:
               chr1:65025067-65025444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               256
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               8, 183
               

               Conread position:
               1-368
               

               Cow position:
               chr1:68817988-68817620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 40
               

               Conread position:
               1-380
               

               Cow position:
               chr1:86113602-86113204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               88, 16
               

               Conread position:
               1-381
               

               Cow position:
               chr1:21577615-21578003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               73, 35
               

               Conread position:
               1-381
               

               Cow position:
               chr1:70227891-70227498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               257
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               61, 20
               

               Conread position:
               1-381
               

               Cow position:
               chr1:101713928-101714309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               259
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               155, 112
               

               Conread position:
               1-382
               

               Cow position:
               chr1:77720421-77720066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               120, 38
               

               Conread position:
               1-396
               

               Cow position:
               chr1:51394235-51394626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               149, 38
               

               Conread position:
               1-397
               

               Cow position:
               chr1:84812126-84811733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 95
               

               Conread position:
               1-398
               

               Cow position:
               chr1:61391982-61391583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               103, 223
               

               Conread position:
               1-400
               

               Cow position:
               chr1:8433-8834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               89, 49
               

               Conread position:
               1-400
               

               Cow position:
               chr1:26896014-26895599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               273
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               121, 26
               

               Conread position:
               1-400
               

               Cow position:
               chr1:100400391-100399994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               83, 38
               

               Conread position:
               1-401
               

               Cow position:
               chr1:1956517-1956123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 35
               

               Conread position:
               1-401
               

               Cow position:
               chr1:10632864-10633252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               266
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               115, 46
               

               Conread position:
               1-401
               

               Cow position:
               chr1:15333688-15334100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               71, 242
               

               Conread position:
               1-402
               

               Cow position:
               chr1:31806684-31807079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               263
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               84, 219
               

               Conread position:
               1-402
               

               Cow position:
               chr1:92197271-92197667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 17
               

               Conread position:
               1-403
               

               Cow position:
               chr1:48105623-48105208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               289
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               121, 47
               

               Conread position:
               1-403
               

               Cow position:
               chr1:60032788-60032385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               1-404
               

               Cow position:
               chr1:54199573-54199180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               269
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               1-404
               

               Cow position:
               chr1:69678515-69678108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 110
               

               Conread position:
               1-405
               

               Cow position:
               chr1:45555174-45555580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               116, 53
               

               Conread position:
               1-405
               

               Cow position:
               chr1:97820496-97820902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               275
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               104, 163
               

               Conread position:
               1-406
               

               Cow position:
               chr1:21955563-21955154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               81, 44
               

               Conread position:
               1-406
               

               Cow position:
               chr1:24133245-24132841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 28
               

               Conread position:
               1-407
               

               Cow position:
               chr1:724545-724957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               265
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               121, 71
               

               Conread position:
               1-407
               

               Cow position:
               chr1:1877838-1878243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               276
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               83, 53
               

               Conread position:
               1-407
               

               Cow position:
               chr1:43505334-43505742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 25
               

               Conread position:
               1-408
               

               Cow position:
               chr1:44506778-44507192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               281
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               83, 40
               

               Conread position:
               1-408
               

               Cow position:
               chr1:82936771-82936386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               276
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               357, 38
               

               Conread position:
               1-408
               

               Cow position:
               chr1:102784771-102785165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               281
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               170, 54
               

               Conread position:
               1-409
               

               Cow position:
               chr1:12222794-12222383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               84, 30
               

               Conread position:
               1-409
               

               Cow position:
               chr1:22836213-22836619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               270
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               84, 34
               

               Conread position:
               1-410
               

               Cow position:
               chr1:197197-196781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 302
               

               Conread position:
               1-411
               

               Cow position:
               chr1:81515050-81515461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               180, 145
               

               Conread position:
               1-414
               

               Cow position:
               chr1:42256697-42256278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               84, 157
               

               Conread position:
               1-414
               

               Cow position:
               chr1:93499433-93499844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 137
               

               Conread position:
               1-415
               

               Cow position:
               chr1:5423924-5423506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 58
               

               Conread position:
               1-415
               

               Cow position:
               chr1:51445690-51446109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               83, 38
               

               Conread position:
               1-417
               

               Cow position:
               chr1:64804297-64803864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 165
               

               Conread position:
               1-418
               

               Cow position:
               chr1:48580942-48581362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               82, 51
               

               Conread position:
               1-418
               

               Cow position:
               chr1:68276217-68276651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               83, 146
               

               Conread position:
               1-419
               

               Cow position:
               chr1:31934324-31934737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               83, 18
               

               Conread position:
               1-419
               

               Cow position:
               chr1:34159642-34160062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               83, 49
               

               Conread position:
               1-419
               

               Cow position:
               chr1:71045565-71045965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               105, 40
               

               Conread position:
               1-420
               

               Cow position:
               chr1:73546096-73545676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               79, 119
               

               Conread position:
               1-421
               

               Cow position:
               chr1:43340812-43340397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               284
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               83, 167
               

               Conread position:
               1-422
               

               Cow position:
               chr1:72035119-72034692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               82, 168
               

               Conread position:
               2-95
               

               Cow position:
               chr1:81478289-81478197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               94
               

               Alignm identity:
               80
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               2-100
               

               Cow position:
               chr1:53650701-53650800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               2-101
               

               Cow position:
               chr1:56618867-56618769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               2-101
               

               Cow position:
               chr1:82513772-82513673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-119
               

               Cow position:
               chr1:99792623-99792740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-120
               

               Cow position:
               chr1:40062260-40062378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               115, 109
               

               Conread position:
               2-120
               

               Cow position:
               chr1:55686409-55686291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-163
               

               Cow position:
               chr1:67821398-67821238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               120, 29
               

               Conread position:
               2-173
               

               Cow position:
               chr1:26930163-26929989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               119, 154
               

               Conread position:
               2-183
               

               Cow position:
               chr1:33910437-33910618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               83, 151
               

               Conread position:
               2-183
               

               Cow position:
               chr1:57760169-57760351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 159
               

               Conread position:
               2-193
               

               Cow position:
               chr1:76879104-76879298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 174
               

               Conread position:
               2-213
               

               Cow position:
               chr1:3931567-3931353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 167
               

               Conread position:
               2-213
               

               Cow position:
               chr1:7867845-7868059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-213
               

               Cow position:
               chr1:17056538-17056752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-213
               

               Cow position:
               chr1:17058098-17057884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-213
               

               Cow position:
               chr1:19776608-19776822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-213
               

               Cow position:
               chr1:31714638-31714425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-213
               

               Cow position:
               chr1:56837815-56838029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-213
               

               Cow position:
               chr1:59790300-59790087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 152
               

               Conread position:
               2-213
               

               Cow position:
               chr1:61564604-61564819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               102, 177
               

               Conread position:
               2-213
               

               Cow position:
               chr1:68052414-68052202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 130
               

               Conread position:
               2-213
               

               Cow position:
               chr1:68087678-68087892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 153
               

               Conread position:
               2-213
               

               Cow position:
               chr1:73564487-73564273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-213
               

               Cow position:
               chr1:78234615-78234401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-213
               

               Cow position:
               chr1:83059570-83059356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-213
               

               Cow position:
               chr1:84905013-84905233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               2-224
               

               Cow position:
               chr1:8884635-8884859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 152
               

               Conread position:
               2-226
               

               Cow position:
               chr1:6897907-6897680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-226
               

               Cow position:
               chr1:21807275-21807502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-226
               

               Cow position:
               chr1:57615564-57615791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-229
               

               Cow position:
               chr1:1028440-1028670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 174
               

               Conread position:
               2-230
               

               Cow position:
               chr1:84447754-84447983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 157
               

               Conread position:
               2-234
               

               Cow position:
               chr1:11665468-11665233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 131
               

               Conread position:
               2-234
               

               Cow position:
               chr1:13451861-13452095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 95
               

               Conread position:
               2-234
               

               Cow position:
               chr1:40059238-40059475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               40, 176
               

               Conread position:
               2-234
               

               Cow position:
               chr1:72765967-72765732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-236
               

               Cow position:
               chr1:48638866-48638625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               2-237
               

               Cow position:
               chr1:96671471-96671709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-237
               

               Cow position:
               chr1:98985110-98984871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               73, 154
               

               Conread position:
               2-258
               

               Cow position:
               chr1:99614259-99614512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               115, 130
               

               Conread position:
               2-264
               

               Cow position:
               chr1:16839390-16839659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               82, 131
               

               Conread position:
               2-266
               

               Cow position:
               chr1:20204838-20205101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 45
               

               Conread position:
               2-269
               

               Cow position:
               chr1:89497777-89498030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               165, 32
               

               Conread position:
               2-274
               

               Cow position:
               chr1:74822263-74822529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 110
               

               Conread position:
               2-283
               

               Cow position:
               chr1:3167261-3166985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 129
               

               Conread position:
               2-306
               

               Cow position:
               chr1:68253403-68253706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               29, 54
               

               Conread position:
               2-328
               

               Cow position:
               chr1:47233663-47233342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               120, 35
               

               Conread position:
               2-346
               

               Cow position:
               chr1:42398385-42398039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               82, 34
               

               Conread position:
               2-348
               

               Cow position:
               chr1:51417589-51417923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               120, 17
               

               Conread position:
               2-350
               

               Cow position:
               chr1:57575956-57575603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               256
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               41, 29
               

               Conread position:
               2-353
               

               Cow position:
               chr1:83072255-83072606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 29
               

               Conread position:
               2-354
               

               Cow position:
               chr1:25383474-25383834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 23
               

               Conread position:
               2-354
               

               Cow position:
               chr1:41056495-41056845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 29
               

               Conread position:
               2-354
               

               Cow position:
               chr1:41696866-41697218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 175
               

               Conread position:
               2-354
               

               Cow position:
               chr1:78810847-78811203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 176
               

               Conread position:
               2-356
               

               Cow position:
               chr1:53397799-53398140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               246
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               294, 109
               

               Conread position:
               2-356
               

               Cow position:
               chr1:54207007-54206652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               256
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               119, 20
               

               Conread position:
               2-356
               

               Cow position:
               chr1:62964091-62964435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               103, 20
               

               Conread position:
               2-361
               

               Cow position:
               chr1:61005754-61005388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               120, 170
               

               Conread position:
               2-362
               

               Cow position:
               chr1:19516593-19516223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               114, 12
               

               Conread position:
               2-399
               

               Cow position:
               chr1:34771692-34771289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               277
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               54, 27
               

               Conread position:
               2-405
               

               Cow position:
               chr1:79844280-79844697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               292
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               107, 45
               

               Conread position:
               2-413
               

               Cow position:
               chr1:19482261-19481876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               282
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               104, 30
               

               Conread position:
               2-415
               

               Cow position:
               chr1:73960513-73960919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 158
               

               Conread position:
               2-415
               

               Cow position:
               chr1:75744672-75745089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 39
               

               Conread position:
               2-416
               

               Cow position:
               chr1:72304559-72304172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               281
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               353, 37
               

               Conread position:
               2-420
               

               Cow position:
               chr1:1981298-1980879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 32
               

               Conread position:
               3-173
               

               Cow position:
               chr1:89082920-89083092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               101, 43
               

               Conread position:
               3-266
               

               Cow position:
               chr1:98551525-98551794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               3-324
               

               Cow position:
               chr1:13614907-13614604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               81, 104
               

               Conread position:
               3-414
               

               Cow position:
               chr1:4691404-4691814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 18
               

               Conread position:
               4-101
               

               Cow position:
               chr1:86484769-86484867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               4-166
               

               Cow position:
               chr1:98380763-98380596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               80, 58
               

               Conread position:
               4-173
               

               Cow position:
               chr1:36645377-36645203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 43
               

               Conread position:
               4-180
               

               Cow position:
               chr1:38712836-38713019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               4-181
               

               Cow position:
               chr1:52170770-52170592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               81, 152
               

               Conread position:
               4-181
               

               Cow position:
               chr1:95604825-95605004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               87, 129
               

               Conread position:
               4-185
               

               Cow position:
               chr1:52354601-52354416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 174
               

               Conread position:
               4-187
               

               Cow position:
               chr1:50266989-50266805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               81, 35
               

               Conread position:
               4-187
               

               Cow position:
               chr1:100537624-100537806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               47, 89
               

               Conread position:
               4-188
               

               Cow position:
               chr1:15743892-15744078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               85, 125
               

               Conread position:
               4-188
               

               Cow position:
               chr1:40089765-40089952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               81, 151
               

               Conread position:
               4-188
               

               Cow position:
               chr1:57097178-57097360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               81, 57
               

               Conread position:
               4-188
               

               Cow position:
               chr1:68717169-68716983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 152
               

               Conread position:
               4-188
               

               Cow position:
               chr1:95809853-95810041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 126
               

               Conread position:
               4-198
               

               Cow position:
               chr1:3661242-3661058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               177, 25
               

               Conread position:
               4-198
               

               Cow position:
               chr1:5873158-5872961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               84, 41
               

               Conread position:
               4-204
               

               Cow position:
               chr1:95056869-95057066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               99, 35
               

               Conread position:
               4-212
               

               Cow position:
               chr1:81470942-81471153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               115, 163
               

               Conread position:
               4-213
               

               Cow position:
               chr1:57900927-57900720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               4-214
               

               Cow position:
               chr1:11770480-11770270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               89, 30
               

               Conread position:
               4-214
               

               Cow position:
               chr1:71818648-71818440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               100, 157
               

               Conread position:
               4-260
               

               Cow position:
               chr1:1991611-1991350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               99, 210
               

               Conread position:
               4-262
               

               Cow position:
               chr1:82884576-82884322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               200
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               118, 35
               

               Conread position:
               4-263
               

               Cow position:
               chr1:97778808-97779063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               76, 122
               

               Conread position:
               4-264
               

               Cow position:
               chr1:677291-677552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               81, 150
               

               Conread position:
               4-264
               

               Cow position:
               chr1:10071033-10070770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               81, 125
               

               Conread position:
               4-264
               

               Cow position:
               chr1:16962200-16961938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               80, 157
               

               Conread position:
               4-264
               

               Cow position:
               chr1:22346849-22347112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 151
               

               Conread position:
               4-264
               

               Cow position:
               chr1:50670890-50671153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               81, 151
               

               Conread position:
               4-264
               

               Cow position:
               chr1:58191498-58191231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               81, 125
               

               Conread position:
               4-264
               

               Cow position:
               chr1:68217545-68217294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               177, 32
               

               Conread position:
               4-264
               

               Cow position:
               chr1:78809697-78809948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               112, 35
               

               Conread position:
               4-264
               

               Cow position:
               chr1:95687292-95687023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               81, 161
               

               Conread position:
               4-267
               

               Cow position:
               chr1:92437177-92436915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               4-268
               

               Cow position:
               chr1:24729026-24728764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               80, 11
               

               Conread position:
               4-277
               

               Cow position:
               chr1:44769298-44769025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               108, 48
               

               Conread position:
               4-282
               

               Cow position:
               chr1:13895673-13895390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 168
               

               Conread position:
               4-282
               

               Cow position:
               chr1:95176749-95177028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               151, 244
               

               Conread position:
               4-283
               

               Cow position:
               chr1:37309697-37309428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               89, 35
               

               Conread position:
               4-290
               

               Cow position:
               chr1:83583124-83582835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               115, 87
               

               Conread position:
               4-293
               

               Cow position:
               chr1:85162734-85162446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 107
               

               Conread position:
               4-297
               

               Cow position:
               chr1:56634912-56635200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               93, 51
               

               Conread position:
               4-328
               

               Cow position:
               chr1:19885198-19885515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               172, 82
               

               Conread position:
               4-328
               

               Cow position:
               chr1:95035542-95035213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               80, 45
               

               Conread position:
               4-354
               

               Cow position:
               chr1:68854988-68855331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               154, 27
               

               Conread position:
               4-355
               

               Cow position:
               chr1:71295501-71295133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 149
               

               Conread position:
               4-356
               

               Cow position:
               chr1:3323672-3324041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               78, 21
               

               Conread position:
               4-356
               

               Cow position:
               chr1:11728991-11729338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               237
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               118, 165
               

               Conread position:
               4-356
               

               Cow position:
               chr1:54258381-54258736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               81, 33
               

               Conread position:
               4-356
               

               Cow position:
               chr1:61012123-61012473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               81, 110
               

               Conread position:
               4-356
               

               Cow position:
               chr1:86482716-86483074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               80, 99
               

               Conread position:
               4-361
               

               Cow position:
               chr1:62036614-62036970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 109
               

               Conread position:
               4-364
               

               Cow position:
               chr1:84282878-84283252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               56, 163
               

               Conread position:
               4-368
               

               Cow position:
               chr1:68619124-68618755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 164
               

               Conread position:
               4-403
               

               Cow position:
               chr1:89510119-89509713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 101
               

               Conread position:
               4-404
               

               Cow position:
               chr1:15547282-15547680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               80, 37
               

               Conread position:
               4-405
               

               Cow position:
               chr1:33207061-33206657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               134, 117
               

               Conread position:
               4-405
               

               Cow position:
               chr1:42887449-42887060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               273
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               111, 47
               

               Conread position:
               4-407
               

               Cow position:
               chr1:70422114-70422520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               81, 158
               

               Conread position:
               4-410
               

               Cow position:
               chr1:6077708-6078123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               285
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               96, 115
               

               Conread position:
               4-410
               

               Cow position:
               chr1:96964134-96964538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               281
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               86, 35
               

               Conread position:
               4-412
               

               Cow position:
               chr1:70538417-70538829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 178
               

               Conread position:
               4-413
               

               Cow position:
               chr1:78857509-78857102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 27
               

               Conread position:
               4-417
               

               Cow position:
               chr1:22826983-22827374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               289
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               163, 39
               

               Conread position:
               4-418
               

               Cow position:
               chr1:33719927-33720336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               293
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               80, 138
               

               Conread position:
               4-418
               

               Cow position:
               chr1:54156927-54156504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               79, 25
               

               Conread position:
               4-419
               

               Cow position:
               chr1:29935568-29935159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               281
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               177, 81
               

               Conread position:
               4-420
               

               Cow position:
               chr1:55705440-55705013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 238
               

               Conread position:
               4-421
               

               Cow position:
               chr1:57880979-57880542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               80, 278
               

               Conread position:
               4-422
               

               Cow position:
               chr1:79590914-79591339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               80, 158
               

               Conread position:
               4-436
               

               Cow position:
               chr1:101634515-101634945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               305
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               117, 28
               

               Conread position:
               4-440
               

               Cow position:
               chr1:63434996-63434546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               303
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               90, 76
               

               Conread position:
               5-120
               

               Cow position:
               chr1:21092906-21093018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               5-172
               

               Cow position:
               chr1:11853875-11853702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               5-177
               

               Cow position:
               chr1:86614676-86614848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               163, 98
               

               Conread position:
               5-180
               

               Cow position:
               chr1:3035178-3035001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               117, 29
               

               Conread position:
               5-198
               

               Cow position:
               chr1:84910816-84910625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               177, 48
               

               Conread position:
               5-211
               

               Cow position:
               chr1:50679471-50679260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 36
               

               Conread position:
               5-212
               

               Cow position:
               chr1:4573335-4573540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               87, 50
               

               Conread position:
               5-212
               

               Cow position:
               chr1:55135648-55135851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               117, 29
               

               Conread position:
               5-212
               

               Cow position:
               chr1:82504781-82504996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               44, 168
               

               Conread position:
               5-214
               

               Cow position:
               chr1:24413254-24413473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               5-229
               

               Cow position:
               chr1:82491872-82492100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 150
               

               Conread position:
               5-254
               

               Cow position:
               chr1:61350962-61351207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               80, 110
               

               Conread position:
               5-264
               

               Cow position:
               chr1:34300733-34300479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               101, 47
               

               Conread position:
               5-266
               

               Cow position:
               chr1:91800791-91800526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               126, 243
               

               Conread position:
               5-267
               

               Cow position:
               chr1:52753351-52753085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 34
               

               Conread position:
               5-268
               

               Cow position:
               chr1:85867408-85867665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 114
               

               Conread position:
               5-271
               

               Cow position:
               chr1:75382806-75383056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               5-283
               

               Cow position:
               chr1:82406738-82406459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               99, 24
               

               Conread position:
               5-293
               

               Cow position:
               chr1:20384806-20384522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               118, 36
               

               Conread position:
               5-349
               

               Cow position:
               chr1:4290973-4291314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               79, 34
               

               Conread position:
               5-350
               

               Cow position:
               chr1:14379716-14379389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               117, 38
               

               Conread position:
               5-356
               

               Cow position:
               chr1:18937019-18936670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               81, 118
               

               Conread position:
               5-404
               

               Cow position:
               chr1:59518736-59519128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               101, 15
               

               Conread position:
               5-408
               

               Cow position:
               chr1:10778388-10778773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               127, 27
               

               Conread position:
               5-409
               

               Cow position:
               chr1:28563754-28563335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               79, 36
               

               Conread position:
               5-410
               

               Cow position:
               chr1:35162218-35162626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               78, 164
               

               Conread position:
               5-420
               

               Cow position:
               chr1:55229799-55230205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               271
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               5-423
               

               Cow position:
               chr1:53495278-53495690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               79, 148
               

               Conread position:
               5-436
               

               Cow position:
               chr1:46693842-46693403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               79, 102
               

               Conread position:
               6-185
               

               Cow position:
               chr1:40604100-40604283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 172
               

               Conread position:
               6-235
               

               Cow position:
               chr1:99039537-99039312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               116, 35
               

               Conread position:
               6-244
               

               Cow position:
               chr1:98372444-98372684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               75, 127
               

               Conread position:
               6-260
               

               Cow position:
               chr1:85774275-85774525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               189, 53
               

               Conread position:
               6-261
               

               Cow position:
               chr1:96952056-96952311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 146
               

               Conread position:
               6-264
               

               Cow position:
               chr1:101867171-101867422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               171, 31
               

               Conread position:
               6-284
               

               Cow position:
               chr1:57946071-57945781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               6-306
               

               Cow position:
               chr1:68763866-68763577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               116, 33
               

               Conread position:
               6-314
               

               Cow position:
               chr1:88652446-88652758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               234
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               106, 33
               

               Conread position:
               6-406
               

               Cow position:
               chr1:21787142-21787541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               266
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               115, 287
               

               Conread position:
               6-412
               

               Cow position:
               chr1:74319969-74319558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               282
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               79, 171
               

               Conread position:
               6-423
               

               Cow position:
               chr1:36998008-36998413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               78, 35
               

               Conread position:
               7-264
               

               Cow position:
               chr1:43352840-43352584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               66, 34
               

               Conread position:
               7-267
               

               Cow position:
               chr1:51981044-51981297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               77, 99
               

               Conread position:
               7-283
               

               Cow position:
               chr1:74947310-74947027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               92, 190
               

               Conread position:
               7-291
               

               Cow position:
               chr1:73682420-73682145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               77, 100
               

               Conread position:
               7-411
               

               Cow position:
               chr1:3923978-3923578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               272
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               102, 32
               

               Conread position:
               7-416
               

               Cow position:
               chr1:6305052-6304646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               77, 162
               

               Conread position:
               8-170
               

               Cow position:
               chr1:63905658-63905490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               5, 54
               

               Conread position:
               8-234
               

               Cow position:
               chr1:48258198-48258425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               77, 160
               

               Conread position:
               8-253
               

               Cow position:
               chr1:24445811-24445567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               114, 20
               

               Conread position:
               8-256
               

               Cow position:
               chr1:85593588-85593839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               77, 170
               

               Conread position:
               8-356
               

               Cow position:
               chr1:5597383-5597045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 29
               

               Conread position:
               8-404
               

               Cow position:
               chr1:70434817-70435199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               267
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               173, 114
               

               Conread position:
               8-418
               

               Cow position:
               chr1:70343855-70344275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               77, 150
               

               Conread position:
               10-173
               

               Cow position:
               chr1:51435776-51435609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 7
               

               Conread position:
               10-216
               

               Cow position:
               chr1:49028779-49028571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               95, 157
               

               Conread position:
               10-226
               

               Cow position:
               chr1:7005132-7005351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               75, 159
               

               Conread position:
               10-270
               

               Cow position:
               chr1:51769903-51770171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               75, 158
               

               Conread position:
               10-272
               

               Cow position:
               chr1:53595145-53595398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 21
               

               Conread position:
               12-266
               

               Cow position:
               chr1:60281188-60281447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               110, 138
               

               Conread position:
               13-256
               

               Cow position:
               chr1:60094866-60095104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               72, 18
               

               Conread position:
               13-264
               

               Cow position:
               chr1:81673885-81674139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               72, 31
               

               Conread position:
               13-398
               

               Cow position:
               chr1:90621692-90621297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 137
               

               Conread position:
               14-164
               

               Cow position:
               chr1:11832944-11832795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               14-214
               

               Cow position:
               chr1:80631522-80631720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               70, 40
               

               Conread position:
               14-331
               

               Cow position:
               chr1:45007290-45007607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               70, 21
               

               Conread position:
               14-333
               

               Cow position:
               chr1:96947881-96947580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               146, 45
               

               Conread position:
               14-350
               

               Cow position:
               chr1:89388155-89388504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               251
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               57, 105
               

               Conread position:
               14-408
               

               Cow position:
               chr1:20667918-20667531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               108, 25
               

               Conread position:
               15-193
               

               Cow position:
               chr1:3456692-3456870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               106, 31
               

               Conread position:
               15-291
               

               Cow position:
               chr1:70297100-70297375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               74, 41
               

               Conread position:
               15-356
               

               Cow position:
               chr1:81569210-81568862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               107, 136
               

               Conread position:
               16-214
               

               Cow position:
               chr1:32244579-32244373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               16-214
               

               Cow position:
               chr1:69004218-69004420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               68, 178
               

               Conread position:
               16-253
               

               Cow position:
               chr1:91875085-91874851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               105, 33
               

               Conread position:
               16-261
               

               Cow position:
               chr1:41735799-41735550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               99, 73
               

               Conread position:
               16-265
               

               Cow position:
               chr1:20000926-20000675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               106, 23
               

               Conread position:
               16-284
               

               Cow position:
               chr1:83747765-83748034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               15, 89
               

               Conread position:
               16-420
               

               Cow position:
               chr1:77620373-77620784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               68, 89
               

               Conread position:
               16-421
               

               Cow position:
               chr1:71119334-71119754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               68, 310
               

               Conread position:
               16-440
               

               Cow position:
               chr1:7748038-7748468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               282
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               8, 158
               

               Conread position:
               17-104
               

               Cow position:
               chr1:58439227-58439140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               77
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               17-415
               

               Cow position:
               chr1:72069012-72068606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               271
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               13, 29
               

               Conread position:
               18-273
               

               Cow position:
               chr1:24876093-24876343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               66, 34
               

               Conread position:
               18-356
               

               Cow position:
               chr1:81290338-81290671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 63
               

               Conread position:
               18-399
               

               Cow position:
               chr1:49317669-49317289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               72, 21
               

               Conread position:
               18-407
               

               Cow position:
               chr1:61884743-61885130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 94
               

               Conread position:
               21-264
               

               Cow position:
               chr1:31695385-31695138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               64, 134
               

               Conread position:
               22-211
               

               Cow position:
               chr1:98790465-98790654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               84, 64
               

               Conread position:
               22-212
               

               Cow position:
               chr1:5162222-5162024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               80, 175
               

               Conread position:
               22-241
               

               Cow position:
               chr1:20544123-20544346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               100, 64
               

               Conread position:
               22-255
               

               Cow position:
               chr1:69127335-69127103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               22-283
               

               Cow position:
               chr1:73196404-73196138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               9, 231
               

               Conread position:
               22-349
               

               Cow position:
               chr1:55429128-55428793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               64, 136
               

               Conread position:
               22-361
               

               Cow position:
               chr1:37322175-37321839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               246
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               9, 222
               

               Conread position:
               22-380
               

               Cow position:
               chr1:89381102-89381466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               89, 157
               

               Conread position:
               24-263
               

               Cow position:
               chr1:67305411-67305169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               83, 91
               

               Conread position:
               25-264
               

               Cow position:
               chr1:97696571-97696816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               65, 221
               

               Conread position:
               26-211
               

               Cow position:
               chr1:71946540-71946351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               96, 42
               

               Conread position:
               26-266
               

               Cow position:
               chr1:27380306-27380530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               26-266
               

               Cow position:
               chr1:75141834-75142071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               55, 95
               

               Conread position:
               26-293
               

               Cow position:
               chr1:12978512-12978783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               96, 133
               

               Conread position:
               26-325
               

               Cow position:
               chr1:101632508-101632205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               5, 152
               

               Conread position:
               26-417
               

               Cow position:
               chr1:88913149-88913548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               30, 161
               

               Conread position:
               26-422
               

               Cow position:
               chr1:61742136-61741730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 220
               

               Conread position:
               27-264
               

               Cow position:
               chr1:74927713-74927956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               63, 136
               

               Conread position:
               27-381
               

               Cow position:
               chr1:24581416-24581759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 91
               

               Conread position:
               28-271
               

               Cow position:
               chr1:70380312-70380064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               83, 176
               

               Conread position:
               28-356
               

               Cow position:
               chr1:95557870-95558207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               56, 139
               

               Conread position:
               28-413
               

               Cow position:
               chr1:86110898-86110517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 141
               

               Conread position:
               29-169
               

               Cow position:
               chr1:37646170-37646025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               93, 139
               

               Conread position:
               29-170
               

               Cow position:
               chr1:31960059-31960207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               29-204
               

               Cow position:
               chr1:75967266-75967443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               93, 143
               

               Conread position:
               29-207
               

               Cow position:
               chr1:94404046-94404229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               10, 149
               

               Conread position:
               29-267
               

               Cow position:
               chr1:83659438-83659203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               55, 8
               

               Conread position:
               29-328
               

               Cow position:
               chr1:39069121-39068826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               8, 122
               

               Conread position:
               29-356
               

               Cow position:
               chr1:56225305-56225636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               237
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               82, 12
               

               Conread position:
               29-399
               

               Cow position:
               chr1:91066319-91065943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               15, 145
               

               Conread position:
               29-404
               

               Cow position:
               chr1:40192848-40192484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               290, 57
               

               Conread position:
               29-408
               

               Cow position:
               chr1:74084363-74083969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               8, 199
               

               Conread position:
               29-412
               

               Cow position:
               chr1:40599878-40600248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 119
               

               Conread position:
               29-416
               

               Cow position:
               chr1:97755351-97755727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               255
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               10, 34
               

               Conread position:
               30-213
               

               Cow position:
               chr1:3137763-3137950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               53, 139
               

               Conread position:
               30-249
               

               Cow position:
               chr1:89508392-89508606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               79, 130
               

               Conread position:
               30-326
               

               Cow position:
               chr1:44075870-44075581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               60, 13
               

               Conread position:
               30-349
               

               Cow position:
               chr1:38753753-38754077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               54, 132
               

               Conread position:
               30-354
               

               Cow position:
               chr1:96277219-96276888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               79, 151
               

               Conread position:
               31-318
               

               Cow position:
               chr1:77683194-77683477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               85, 136
               

               Conread position:
               31-333
               

               Cow position:
               chr1:93554680-93554980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               52, 82
               

               Conread position:
               32-282
               

               Cow position:
               chr1:85647944-85647690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               100, 137
               

               Conread position:
               32-328
               

               Cow position:
               chr1:3882627-3882325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               80, 103
               

               Conread position:
               32-328
               

               Cow position:
               chr1:45553393-45553103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               138, 51
               

               Conread position:
               33-265
               

               Cow position:
               chr1:38401631-38401872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               9, 208
               

               Conread position:
               33-271
               

               Cow position:
               chr1:70026505-70026266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               89, 135
               

               Conread position:
               33-426
               

               Cow position:
               chr1:46036121-46035706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               51, 73
               

               Conread position:
               34-171
               

               Cow position:
               chr1:80311310-80311446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               34-409
               

               Cow position:
               chr1:78096776-78097146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               259
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               149, 69
               

               Conread position:
               35-278
               

               Cow position:
               chr1:101946866-101946628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               69, 26
               

               Conread position:
               35-327
               

               Cow position:
               chr1:90976246-90975948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               55, 145
               

               Conread position:
               35-424
               

               Cow position:
               chr1:42175565-42175967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               273
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               74, 126
               

               Conread position:
               37-361
               

               Cow position:
               chr1:97090167-97090490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               18, 252
               

               Conread position:
               39-264
               

               Cow position:
               chr1:4032470-4032704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               39-310
               

               Cow position:
               chr1:51968306-51968580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               82, 45
               

               Conread position:
               39-356
               

               Cow position:
               chr1:33409783-33409456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               45, 121
               

               Conread position:
               39-356
               

               Cow position:
               chr1:91811631-91811949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 88
               

               Conread position:
               40-356
               

               Cow position:
               chr1:17196783-17196458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               82, 33
               

               Conread position:
               41-213
               

               Cow position:
               chr1:1403632-1403460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               81, 57
               

               Conread position:
               41-244
               

               Cow position:
               chr1:44155098-44155302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               97, 18
               

               Conread position:
               41-283
               

               Cow position:
               chr1:43703254-43703500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               81, 138
               

               Conread position:
               41-329
               

               Cow position:
               chr1:41115868-41115582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 132
               

               Conread position:
               41-356
               

               Cow position:
               chr1:53458543-53458865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               81, 128
               

               Conread position:
               41-356
               

               Cow position:
               chr1:87197674-87197987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               133, 70
               

               Conread position:
               41-356
               

               Cow position:
               chr1:97954611-97954316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               41-382
               

               Cow position:
               chr1:72011963-72011628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 129
               

               Conread position:
               41-417
               

               Cow position:
               chr1:86682716-86682336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               264
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               76, 139
               

               Conread position:
               42-404
               

               Cow position:
               chr1:64572361-64572730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               64, 126
               

               Conread position:
               43-264
               

               Cow position:
               chr1:7971270-7971484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               100, 60
               

               Conread position:
               43-293
               

               Cow position:
               chr1:18780485-18780228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               72, 52
               

               Conread position:
               44-174
               

               Cow position:
               chr1:71797057-71796930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               44-212
               

               Cow position:
               chr1:77099698-77099527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               72, 12
               

               Conread position:
               44-216
               

               Cow position:
               chr1:100812720-100812551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               46, 61
               

               Conread position:
               44-429
               

               Cow position:
               chr1:31272591-31272210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               78, 138
               

               Conread position:
               45-264
               

               Cow position:
               chr1:24534402-24534185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               58, 7
               

               Conread position:
               45-266
               

               Cow position:
               chr1:23512804-23512585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               136, 118
               

               Conread position:
               45-356
               

               Cow position:
               chr1:50931125-50930813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               77, 126
               

               Conread position:
               45-356
               

               Cow position:
               chr1:65318426-65318744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               39, 104
               

               Conread position:
               45-356
               

               Cow position:
               chr1:100761930-100762241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               44, 37
               

               Conread position:
               45-420
               

               Cow position:
               chr1:96305127-96304739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 47
               

               Conread position:
               47-360
               

               Cow position:
               chr1:91023615-91023295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 170
               

               Conread position:
               50-408
               

               Cow position:
               chr1:8129111-8128759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               248
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               61, 69
               

               Conread position:
               51-273
               

               Cow position:
               chr1:87440325-87440548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               113, 208
               

               Conread position:
               55-293
               

               Cow position:
               chr1:89230367-89230130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               79, 49
               

               Conread position:
               55-447
               

               Cow position:
               chr1:48444333-48443936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               66, 124
               

               Conread position:
               56-258
               

               Cow position:
               chr1:85301280-85301483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               65, 81
               

               Conread position:
               56-283
               

               Cow position:
               chr1:85550216-85549987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               66, 112
               

               Conread position:
               56-356
               

               Cow position:
               chr1:89448759-89449065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               53, 261
               

               Conread position:
               56-409
               

               Cow position:
               chr1:92997037-92996664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 97
               

               Conread position:
               58-331
               

               Cow position:
               chr1:41047436-41047157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               53, 61
               

               Conread position:
               58-354
               

               Cow position:
               chr1:101860625-101860322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               202
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               62, 90
               

               Conread position:
               59-369
               

               Cow position:
               chr1:64302383-64302069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               63, 238
               

               Conread position:
               60-283
               

               Cow position:
               chr1:5023890-5023671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               126, 52
               

               Conread position:
               61-266
               

               Cow position:
               chr1:89349829-89350039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               61-409
               

               Cow position:
               chr1:78838665-78839011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               61, 115
               

               Conread position:
               63-356
               

               Cow position:
               chr1:79640421-79640122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               59, 23
               

               Conread position:
               67-267
               

               Cow position:
               chr1:5539404-5539201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               22, 111
               

               Conread position:
               67-292
               

               Cow position:
               chr1:95637702-95637930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               18, 112
               

               Conread position:
               71-356
               

               Cow position:
               chr1:69551607-69551312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               63, 95
               

               Conread position:
               72-354
               

               Cow position:
               chr1:20104146-20104431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               49, 85
               

               Conread position:
               75-265
               

               Cow position:
               chr1:261598-261409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               90, 44
               

               Conread position:
               82-324
               

               Cow position:
               chr1:7023008-7023257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               82-354
               

               Cow position:
               chr1:56618763-56618491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               40, 87
               

               Conread position:
               82-356
               

               Cow position:
               chr1:98059937-98060226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               40, 236
               

               Conread position:
               82-420
               

               Cow position:
               chr1:41138244-41137913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               40, 87
               

               Conread position:
               87-419
               

               Cow position:
               chr1:65028422-65028749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               223
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               26, 210
               

               Conread position:
               94-332
               

               Cow position:
               chr1:82513456-82513214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               28, 87
               

               Conread position:
               94-401
               

               Cow position:
               chr1:77232668-77232353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               186, 19
               

               Conread position:
               106-273
               

               Cow position:
               chr1:61560810-61560642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               58, 16
               

               Conread position:
               125-410
               

               Cow position:
               chr1:80584365-80584648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               167, 37
               

               Conread position:
               127-407
               

               Cow position:
               chr1:46143526-46143249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               53, 38
               

               Conread position:
               133-323
               

               Cow position:
               chr1:79003916-79004106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               49, 114
               

               Conread position:
               133-356
               

               Cow position:
               chr1:89158187-89157963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               35, 165
               

               Conread position:
               133-409
               

               Cow position:
               chr1:54267991-54267719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               49, 18
               

               Conread position:
               136-356
               

               Cow position:
               chr1:81481439-81481218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               46, 168
               
Show alignments to all cow chromosomes.
Conread position:	1-95
Cow position:	chr1:81579574-81579667 (view UCSC Genome Browser custom track)
Alignm length:	95
Alignm identity:	82
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	27, 0
Conread position:	1-100
Cow position:	chr1:98348496-98348397 (view UCSC Genome Browser custom track)
Alignm length:	100
Alignm identity:	83
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	0, 0
Conread position:	1-120
Cow position:	chr1:30504281-30504397 (view UCSC Genome Browser custom track)
Alignm length:	120
Alignm identity:	97
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	58, 0
Conread position:	1-127
Cow position:	chr1:77648127-77647998 (view UCSC Genome Browser custom track)
Alignm length:	131
Alignm identity:	102
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	83, 65
Conread position:	1-155
Cow position:	chr1:89395403-89395566 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	121
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	83, 0
Conread position:	1-161
Cow position:	chr1:85361666-85361831 (view UCSC Genome Browser custom track)
Alignm length:	166
Alignm identity:	124
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	83, 0
Conread position:	1-163
Cow position:	chr1:92370551-92370386 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	128
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	83, 105
Conread position:	1-164
Cow position:	chr1:98619016-98619186 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	127
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	83, 115
Conread position:	1-166
Cow position:	chr1:46940051-46939884 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	124
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	83, 33
Conread position:	1-167
Cow position:	chr1:81180169-81179996 (view UCSC Genome Browser custom track)
Alignm length:	175
Alignm identity:	127
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	83, 169
Conread position:	1-168
Cow position:	chr1:95327342-95327173 (view UCSC Genome Browser custom track)
Alignm length:	170
Alignm identity:	121
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	103, 0
Conread position:	1-169
Cow position:	chr1:15311679-15311848 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	124
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	83, 53
Conread position:	1-172
Cow position:	chr1:4027672-4027851 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	134
Alignm E-value:	9e-25
Alignm gaps (pig, cow):	84, 135
Conread position:	1-173
Cow position:	chr1:87216273-87216443 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	126
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	120, 11
Conread position:	1-174
Cow position:	chr1:49839318-49839490 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	135
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	103, 40
Conread position:	1-177
Cow position:	chr1:59192834-59192651 (view UCSC Genome Browser custom track)
Alignm length:	185
Alignm identity:	132
Alignm E-value:	6e-21
Alignm gaps (pig, cow):	41, 144
Conread position:	1-178
Cow position:	chr1:20287925-20288103 (view UCSC Genome Browser custom track)
Alignm length:	183
Alignm identity:	132
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	122, 112
Conread position:	1-180
Cow position:	chr1:26159621-26159441 (view UCSC Genome Browser custom track)
Alignm length:	181
Alignm identity:	102
Alignm E-value:	3e-24
Alignm gaps (pig, cow):	161, 0
Conread position:	1-185
Cow position:	chr1:39100865-39101052 (view UCSC Genome Browser custom track)
Alignm length:	192
Alignm identity:	140
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	5, 129
Conread position:	1-187
Cow position:	chr1:83593997-83593805 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	148
Alignm E-value:	5e-31
Alignm gaps (pig, cow):	83, 28