Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rthg23_l8.5
        

               Conread position:
               1-71
               

               Cow position:
               chr11:2576369-2576299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               71
               

               Alignm identity:
               68
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-95
               

               Cow position:
               chr11:78480582-78480677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               96
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-101
               

               Cow position:
               chr11:64405551-64405451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               101
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-114
               

               Cow position:
               chr11:374954-375064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               105, 40
               

               Conread position:
               1-115
               

               Cow position:
               chr11:75510448-75510335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               1-125
               

               Cow position:
               chr11:16795367-16795245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               1-153
               

               Cow position:
               chr11:55348048-55348206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr11:35363280-35363439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               1-155
               

               Cow position:
               chr11:84890967-84890809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               1-158
               

               Cow position:
               chr11:70617635-70617793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 58
               

               Conread position:
               1-163
               

               Cow position:
               chr11:25336860-25337025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 105
               

               Conread position:
               1-170
               

               Cow position:
               chr11:40860931-40860753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1-173
               

               Cow position:
               chr11:41598942-41598766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               1-179
               

               Cow position:
               chr11:25165229-25165407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               121, 21
               

               Conread position:
               1-185
               

               Cow position:
               chr11:30866924-30867111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               121, 85
               

               Conread position:
               1-186
               

               Cow position:
               chr11:63520558-63520745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               121, 58
               

               Conread position:
               1-192
               

               Cow position:
               chr11:71846564-71846369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               6, 167
               

               Conread position:
               1-197
               

               Cow position:
               chr11:5526789-5526589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 176
               

               Conread position:
               1-197
               

               Cow position:
               chr11:17553561-17553363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               84, 69
               

               Conread position:
               1-197
               

               Cow position:
               chr11:55117258-55117446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               180, 85
               

               Conread position:
               1-197
               

               Cow position:
               chr11:59370800-59370996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               121, 56
               

               Conread position:
               1-198
               

               Cow position:
               chr11:38193937-38194140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               1-199
               

               Cow position:
               chr11:75748220-75748418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 24
               

               Conread position:
               1-200
               

               Cow position:
               chr11:6580599-6580803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               1-207
               

               Cow position:
               chr11:17660880-17661082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               126, 24
               

               Conread position:
               1-207
               

               Cow position:
               chr11:26535560-26535764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               30, 84
               

               Conread position:
               1-207
               

               Cow position:
               chr11:83066281-83066489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               121, 28
               

               Conread position:
               1-210
               

               Cow position:
               chr11:17112841-17112637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               83, 33
               

               Conread position:
               1-211
               

               Cow position:
               chr11:41239489-41239273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               1-211
               

               Cow position:
               chr11:77207834-77208038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               105, 44
               

               Conread position:
               1-211
               

               Cow position:
               chr11:81174675-81174882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               83, 42
               

               Conread position:
               1-212
               

               Cow position:
               chr11:2309658-2309869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               6, 26
               

               Conread position:
               1-212
               

               Cow position:
               chr11:2514807-2514597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               114, 101
               

               Conread position:
               1-212
               

               Cow position:
               chr11:17968790-17968585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               180, 30
               

               Conread position:
               1-212
               

               Cow position:
               chr11:59872711-59872927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               31, 63
               

               Conread position:
               1-213
               

               Cow position:
               chr11:25319836-25320053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               118, 215
               

               Conread position:
               1-214
               

               Cow position:
               chr11:1485575-1485360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               85, 160
               

               Conread position:
               1-214
               

               Cow position:
               chr11:7444825-7445040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               84, 46
               

               Conread position:
               1-214
               

               Cow position:
               chr11:37068518-37068318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               93, 40
               

               Conread position:
               1-215
               

               Cow position:
               chr11:3175164-3175382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               84, 175
               

               Conread position:
               1-215
               

               Cow position:
               chr11:21830567-21830348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               115, 53
               

               Conread position:
               1-215
               

               Cow position:
               chr11:32431922-32432141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               84, 166
               

               Conread position:
               1-216
               

               Cow position:
               chr11:8105568-8105786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               87, 30
               

               Conread position:
               1-216
               

               Cow position:
               chr11:47586560-47586349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               87, 13
               

               Conread position:
               1-216
               

               Cow position:
               chr11:48901292-48901082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               105, 38
               

               Conread position:
               1-216
               

               Cow position:
               chr11:62808863-62808651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               87, 38
               

               Conread position:
               1-216
               

               Cow position:
               chr11:63516609-63516828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               1-216
               

               Cow position:
               chr11:65857643-65857861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               78, 30
               

               Conread position:
               1-227
               

               Cow position:
               chr11:4412232-4412010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               121, 142
               

               Conread position:
               1-234
               

               Cow position:
               chr11:18372863-18373094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               88, 30
               

               Conread position:
               1-236
               

               Cow position:
               chr11:16251463-16251223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 54
               

               Conread position:
               1-238
               

               Cow position:
               chr11:50197659-50197410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               67, 176
               

               Conread position:
               1-239
               

               Cow position:
               chr11:60302172-60301937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               121, 38
               

               Conread position:
               1-244
               

               Cow position:
               chr11:44642500-44642256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               115, 30
               

               Conread position:
               1-247
               

               Cow position:
               chr11:6154197-6154440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               116, 68
               

               Conread position:
               1-247
               

               Cow position:
               chr11:79985899-79986147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               84, 54
               

               Conread position:
               1-248
               

               Cow position:
               chr11:18210563-18210315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               121, 166
               

               Conread position:
               1-249
               

               Cow position:
               chr11:18591648-18591400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               121, 21
               

               Conread position:
               1-249
               

               Cow position:
               chr11:61246672-61246425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               84, 20
               

               Conread position:
               1-252
               

               Cow position:
               chr11:8339619-8339369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               114, 50
               

               Conread position:
               1-255
               

               Cow position:
               chr11:2811938-2811690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               105, 30
               

               Conread position:
               1-260
               

               Cow position:
               chr11:71071641-71071381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               84, 42
               

               Conread position:
               1-261
               

               Cow position:
               chr11:16226491-16226746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               84, 37
               

               Conread position:
               1-261
               

               Cow position:
               chr11:63482640-63482384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               1-261
               

               Cow position:
               chr11:84724437-84724700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               84, 154
               

               Conread position:
               1-262
               

               Cow position:
               chr11:13191005-13191281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               87, 161
               

               Conread position:
               1-262
               

               Cow position:
               chr11:50951336-50951604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               96, 195
               

               Conread position:
               1-263
               

               Cow position:
               chr11:5226956-5226683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               84, 167
               

               Conread position:
               1-263
               

               Cow position:
               chr11:62155412-62155686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               83, 21
               

               Conread position:
               1-264
               

               Cow position:
               chr11:15503886-15504161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               83, 202
               

               Conread position:
               1-264
               

               Cow position:
               chr11:18244156-18243893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               84, 151
               

               Conread position:
               1-264
               

               Cow position:
               chr11:18341253-18340992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               114, 85
               

               Conread position:
               1-264
               

               Cow position:
               chr11:32377973-32378236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               83, 38
               

               Conread position:
               1-264
               

               Cow position:
               chr11:35723762-35724017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               84, 160
               

               Conread position:
               1-264
               

               Cow position:
               chr11:36799513-36799258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               88, 35
               

               Conread position:
               1-264
               

               Cow position:
               chr11:37974711-37974983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               88, 28
               

               Conread position:
               1-264
               

               Cow position:
               chr11:51293624-51293359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               87, 32
               

               Conread position:
               1-264
               

               Cow position:
               chr11:79728888-79728619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               36, 170
               

               Conread position:
               1-265
               

               Cow position:
               chr11:11534118-11533879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               1-266
               

               Cow position:
               chr11:15285832-15285564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               85, 108
               

               Conread position:
               1-266
               

               Cow position:
               chr11:30912207-30911953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               1-266
               

               Cow position:
               chr11:36986747-36987000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 132
               

               Conread position:
               1-266
               

               Cow position:
               chr11:41986258-41985995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 40
               

               Conread position:
               1-266
               

               Cow position:
               chr11:44234140-44234406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 25
               

               Conread position:
               1-266
               

               Cow position:
               chr11:44575951-44575694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               71, 47
               

               Conread position:
               1-266
               

               Cow position:
               chr11:76114441-76114697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               137, 40
               

               Conread position:
               1-266
               

               Cow position:
               chr11:76369736-76369472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               1-267
               

               Cow position:
               chr11:287548-287284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               83, 41
               

               Conread position:
               1-267
               

               Cow position:
               chr11:4732124-4732394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               83, 69
               

               Conread position:
               1-267
               

               Cow position:
               chr11:17495960-17495690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 11
               

               Conread position:
               1-267
               

               Cow position:
               chr11:19593604-19593869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               83, 106
               

               Conread position:
               1-267
               

               Cow position:
               chr11:21894368-21894110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               86, 53
               

               Conread position:
               1-267
               

               Cow position:
               chr11:30720883-30721150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 40
               

               Conread position:
               1-267
               

               Cow position:
               chr11:32595252-32595509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               83, 117
               

               Conread position:
               1-267
               

               Cow position:
               chr11:33294006-33293727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               30, 193
               

               Conread position:
               1-267
               

               Cow position:
               chr11:33349916-33349649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               83, 121
               

               Conread position:
               1-267
               

               Cow position:
               chr11:40467338-40467072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               83, 161
               

               Conread position:
               1-267
               

               Cow position:
               chr11:56728732-56729001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               83, 103
               

               Conread position:
               1-271
               

               Cow position:
               chr11:58588130-58588400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               121, 165
               

               Conread position:
               1-273
               

               Cow position:
               chr11:4323152-4323416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               102, 49
               

               Conread position:
               1-275
               

               Cow position:
               chr11:59702270-59702546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               1-278
               

               Cow position:
               chr11:36647146-36647406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               1-283
               

               Cow position:
               chr11:30879465-30879735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               89, 127
               

               Conread position:
               1-283
               

               Cow position:
               chr11:35684712-35684433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 168
               

               Conread position:
               1-283
               

               Cow position:
               chr11:42044205-42043928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               1-283
               

               Cow position:
               chr11:69810689-69810971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               172, 121
               

               Conread position:
               1-284
               

               Cow position:
               chr11:34032412-34032134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               83, 36
               

               Conread position:
               1-284
               

               Cow position:
               chr11:61859114-61858834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 100
               

               Conread position:
               1-290
               

               Cow position:
               chr11:33341361-33341070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 38
               

               Conread position:
               1-291
               

               Cow position:
               chr11:18588795-18588512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               83, 105
               

               Conread position:
               1-292
               

               Cow position:
               chr11:61454749-61454440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               90, 144
               

               Conread position:
               1-293
               

               Cow position:
               chr11:31352787-31352474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               1-293
               

               Cow position:
               chr11:48271980-48272278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 181
               

               Conread position:
               1-304
               

               Cow position:
               chr11:8840955-8840660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               263, 107
               

               Conread position:
               1-306
               

               Cow position:
               chr11:39115279-39115583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 55
               

               Conread position:
               1-316
               

               Cow position:
               chr11:62151096-62150789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               116, 39
               

               Conread position:
               1-319
               

               Cow position:
               chr11:47899062-47899368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 167
               

               Conread position:
               1-322
               

               Cow position:
               chr11:23232728-23232405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               102, 55
               

               Conread position:
               1-323
               

               Cow position:
               chr11:7589976-7590300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               225
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               105, 166
               

               Conread position:
               1-323
               

               Cow position:
               chr11:30924938-30925266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               88, 42
               

               Conread position:
               1-323
               

               Cow position:
               chr11:43430661-43430351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               176, 13
               

               Conread position:
               1-323
               

               Cow position:
               chr11:45898270-45897945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               121, 158
               

               Conread position:
               1-323
               

               Cow position:
               chr11:83230602-83230289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               291, 33
               

               Conread position:
               1-325
               

               Cow position:
               chr11:1071306-1070983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               230
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               121, 49
               

               Conread position:
               1-326
               

               Cow position:
               chr11:3233866-3234192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               84, 165
               

               Conread position:
               1-327
               

               Cow position:
               chr11:377863-377525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               1-328
               

               Cow position:
               chr11:2092126-2092444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               229
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               156, 27
               

               Conread position:
               1-328
               

               Cow position:
               chr11:53778398-53778727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               83, 54
               

               Conread position:
               1-328
               

               Cow position:
               chr11:73924773-73924444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               239
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               107, 30
               

               Conread position:
               1-337
               

               Cow position:
               chr11:22978074-22977755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               300, 36
               

               Conread position:
               1-346
               

               Cow position:
               chr11:54856421-54856743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 31
               

               Conread position:
               1-348
               

               Cow position:
               chr11:15016831-15017195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               121, 30
               

               Conread position:
               1-348
               

               Cow position:
               chr11:33414019-33414375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 65
               

               Conread position:
               1-348
               

               Cow position:
               chr11:38638906-38639236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               231
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               121, 56
               

               Conread position:
               1-349
               

               Cow position:
               chr11:32436114-32436476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               83, 302
               

               Conread position:
               1-349
               

               Cow position:
               chr11:67804534-67804883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               1-354
               

               Cow position:
               chr11:34120983-34121341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 121
               

               Conread position:
               1-355
               

               Cow position:
               chr11:17083512-17083171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               169, 13
               

               Conread position:
               1-355
               

               Cow position:
               chr11:44031785-44032151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               256
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               121, 181
               

               Conread position:
               1-355
               

               Cow position:
               chr11:73354268-73353923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               82, 38
               

               Conread position:
               1-356
               

               Cow position:
               chr11:8525328-8524973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               245
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               105, 164
               

               Conread position:
               1-356
               

               Cow position:
               chr11:11469848-11469508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               250
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               121, 38
               

               Conread position:
               1-356
               

               Cow position:
               chr11:19500992-19500659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               248
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-356
               

               Cow position:
               chr11:21728482-21728143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               245
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               179, 28
               

               Conread position:
               1-356
               

               Cow position:
               chr11:29960090-29960438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               167, 31
               

               Conread position:
               1-356
               

               Cow position:
               chr11:32198725-32199088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               83, 60
               

               Conread position:
               1-356
               

               Cow position:
               chr11:34145131-34144774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               121, 85
               

               Conread position:
               1-356
               

               Cow position:
               chr11:43361011-43360642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               51, 233
               

               Conread position:
               1-356
               

               Cow position:
               chr11:45872533-45872165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               83, 38
               

               Conread position:
               1-356
               

               Cow position:
               chr11:48544228-48544581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               178, 30
               

               Conread position:
               1-356
               

               Cow position:
               chr11:55761664-55762002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               236, 13
               

               Conread position:
               1-356
               

               Cow position:
               chr11:64029471-64029122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               82, 35
               

               Conread position:
               1-356
               

               Cow position:
               chr11:71868818-71868458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 36
               

               Conread position:
               1-356
               

               Cow position:
               chr11:78381261-78380924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               89, 30
               

               Conread position:
               1-356
               

               Cow position:
               chr11:81162646-81162302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 31
               

               Conread position:
               1-356
               

               Cow position:
               chr11:81300827-81300476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               102, 158
               

               Conread position:
               1-356
               

               Cow position:
               chr11:81406372-81406022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               99, 38
               

               Conread position:
               1-356
               

               Cow position:
               chr11:87155300-87155666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               245
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               82, 162
               

               Conread position:
               1-359
               

               Cow position:
               chr11:38874617-38874271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               83, 37
               

               Conread position:
               1-361
               

               Cow position:
               chr11:59902673-59903042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               83, 159
               

               Conread position:
               1-363
               

               Cow position:
               chr11:19487690-19487327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               236
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               84, 40
               

               Conread position:
               1-369
               

               Cow position:
               chr11:63065439-63065811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               255
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               85, 162
               

               Conread position:
               1-381
               

               Cow position:
               chr11:23251818-23251428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               252
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               83, 167
               

               Conread position:
               1-401
               

               Cow position:
               chr11:15632774-15632367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               120, 166
               

               Conread position:
               1-403
               

               Cow position:
               chr11:66188535-66188126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               109, 29
               

               Conread position:
               1-405
               

               Cow position:
               chr11:64044024-64044412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 169
               

               Conread position:
               1-407
               

               Cow position:
               chr11:18698660-18699070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               105, 289
               

               Conread position:
               1-407
               

               Cow position:
               chr11:85723487-85723890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               83, 26
               

               Conread position:
               1-408
               

               Cow position:
               chr11:36112203-36112610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               280
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               39, 171
               

               Conread position:
               1-408
               

               Cow position:
               chr11:46746420-46746837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               107, 30
               

               Conread position:
               1-408
               

               Cow position:
               chr11:55333694-55334120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               286
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               121, 168
               

               Conread position:
               1-409
               

               Cow position:
               chr11:30354852-30355243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               279
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               83, 110
               

               Conread position:
               1-409
               

               Cow position:
               chr11:53773458-53773883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               277
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1-409
               

               Cow position:
               chr11:70484076-70483652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               278
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               1-410
               

               Cow position:
               chr11:15467255-15467647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               84, 53
               

               Conread position:
               1-410
               

               Cow position:
               chr11:31227780-31228157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               307, 25
               

               Conread position:
               1-412
               

               Cow position:
               chr11:13499800-13500210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               277
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               70, 21
               

               Conread position:
               1-412
               

               Cow position:
               chr11:31413236-31413659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               78, 42
               

               Conread position:
               1-413
               

               Cow position:
               chr11:2925505-2925107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 102
               

               Conread position:
               1-413
               

               Cow position:
               chr11:5961098-5961510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               93, 34
               

               Conread position:
               1-414
               

               Cow position:
               chr11:25620610-25620183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               285
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               1-414
               

               Cow position:
               chr11:55744259-55744677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               272
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               83, 60
               

               Conread position:
               1-415
               

               Cow position:
               chr11:30191955-30192386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 79
               

               Conread position:
               1-416
               

               Cow position:
               chr11:5418479-5418053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               84, 11
               

               Conread position:
               1-417
               

               Cow position:
               chr11:6400287-6399859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               84, 64
               

               Conread position:
               1-417
               

               Cow position:
               chr11:52381085-52380666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               279
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               105, 38
               

               Conread position:
               1-417
               

               Cow position:
               chr11:77745465-77745042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               89, 30
               

               Conread position:
               1-419
               

               Cow position:
               chr11:80923549-80923109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 249
               

               Conread position:
               1-420
               

               Cow position:
               chr11:39462403-39462830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               284
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               63, 120
               

               Conread position:
               1-421
               

               Cow position:
               chr11:25791906-25791479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               91, 55
               

               Conread position:
               1-421
               

               Cow position:
               chr11:42016853-42016430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               83, 169
               

               Conread position:
               1-422
               

               Cow position:
               chr11:34616054-34616472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 30
               

               Conread position:
               1-427
               

               Cow position:
               chr11:15772937-15772498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               86, 233
               

               Conread position:
               1-427
               

               Cow position:
               chr11:36182474-36182907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               297
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               121, 40
               

               Conread position:
               1-429
               

               Cow position:
               chr11:11125449-11125887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               292
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               121, 28
               

               Conread position:
               1-430
               

               Cow position:
               chr11:42836175-42835726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               83, 46
               

               Conread position:
               1-437
               

               Cow position:
               chr11:17278878-17278456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               88, 21
               

               Conread position:
               1-438
               

               Cow position:
               chr11:66733621-66734070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               310
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               82, 74
               

               Conread position:
               1-440
               

               Cow position:
               chr11:62663447-62663008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               295
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               51, 157
               

               Conread position:
               2-94
               

               Cow position:
               chr11:49873213-49873303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               93
               

               Alignm identity:
               81
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               2-96
               

               Cow position:
               chr11:30466833-30466739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               95
               

               Alignm identity:
               80
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               2-102
               

               Cow position:
               chr11:17036766-17036665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               2-150
               

               Cow position:
               chr11:10364410-10364259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               47, 114
               

               Conread position:
               2-170
               

               Cow position:
               chr11:1599173-1599333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               2-172
               

               Cow position:
               chr11:75355397-75355566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               50, 29
               

               Conread position:
               2-197
               

               Cow position:
               chr11:62749964-62749774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               157
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               179, 110
               

               Conread position:
               2-205
               

               Cow position:
               chr11:47846726-47846931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-207
               

               Cow position:
               chr11:53130598-53130805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               2-212
               

               Cow position:
               chr11:67951176-67950975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               2-213
               

               Cow position:
               chr11:15048193-15048407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-213
               

               Cow position:
               chr11:24731717-24731929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 172
               

               Conread position:
               2-213
               

               Cow position:
               chr11:30433282-30433496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-213
               

               Cow position:
               chr11:43369612-43369398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-213
               

               Cow position:
               chr11:46142253-46142038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 154
               

               Conread position:
               2-213
               

               Cow position:
               chr11:50497278-50497490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 130
               

               Conread position:
               2-213
               

               Cow position:
               chr11:58883798-58883578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               2-213
               

               Cow position:
               chr11:61120530-61120744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 167
               

               Conread position:
               2-213
               

               Cow position:
               chr11:62358063-62357849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-213
               

               Cow position:
               chr11:63185763-63185549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-224
               

               Cow position:
               chr11:36301295-36301068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               5, 161
               

               Conread position:
               2-226
               

               Cow position:
               chr11:10700907-10700680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-226
               

               Cow position:
               chr11:41040909-41040682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 157
               

               Conread position:
               2-226
               

               Cow position:
               chr11:47367282-47367509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-226
               

               Cow position:
               chr11:47369933-47370160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-226
               

               Cow position:
               chr11:57760587-57760813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-226
               

               Cow position:
               chr11:74389790-74390017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-229
               

               Cow position:
               chr11:39440523-39440295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               83, 121
               

               Conread position:
               2-229
               

               Cow position:
               chr11:83767999-83768228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-230
               

               Cow position:
               chr11:41422046-41421815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               83, 154
               

               Conread position:
               2-230
               

               Cow position:
               chr11:60778318-60778549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-234
               

               Cow position:
               chr11:20730492-20730259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 151
               

               Conread position:
               2-234
               

               Cow position:
               chr11:57946155-57945920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-235
               

               Cow position:
               chr11:25991691-25991455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-252
               

               Cow position:
               chr11:65430848-65431091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               193
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               120, 39
               

               Conread position:
               2-262
               

               Cow position:
               chr11:1849379-1849125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               51, 109
               

               Conread position:
               2-264
               

               Cow position:
               chr11:18526106-18525848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 114
               

               Conread position:
               2-266
               

               Cow position:
               chr11:24937448-24937716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 84
               

               Conread position:
               2-266
               

               Cow position:
               chr11:83323360-83323614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               110, 22
               

               Conread position:
               2-267
               

               Cow position:
               chr11:70114259-70114524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               87, 44
               

               Conread position:
               2-277
               

               Cow position:
               chr11:87147481-87147201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               83, 159
               

               Conread position:
               2-283
               

               Cow position:
               chr11:44036502-44036787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               111, 98
               

               Conread position:
               2-283
               

               Cow position:
               chr11:50778157-50778435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 171
               

               Conread position:
               2-283
               

               Cow position:
               chr11:67550578-67550310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               110, 29
               

               Conread position:
               2-293
               

               Cow position:
               chr11:16342455-16342151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 47
               

               Conread position:
               2-293
               

               Cow position:
               chr11:69119086-69119371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 101
               

               Conread position:
               2-321
               

               Cow position:
               chr11:43897924-43898248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               229
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               105, 158
               

               Conread position:
               2-323
               

               Cow position:
               chr11:952055-952378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 113
               

               Conread position:
               2-326
               

               Cow position:
               chr11:47544914-47545239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 235
               

               Conread position:
               2-328
               

               Cow position:
               chr11:20761631-20761959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 35
               

               Conread position:
               2-351
               

               Cow position:
               chr11:11557955-11558311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 39
               

               Conread position:
               2-353
               

               Cow position:
               chr11:18707027-18706687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               118, 61
               

               Conread position:
               2-354
               

               Cow position:
               chr11:20238460-20238819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 53
               

               Conread position:
               2-356
               

               Cow position:
               chr11:27248278-27248633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 30
               

               Conread position:
               2-356
               

               Cow position:
               chr11:45646807-45646448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 39
               

               Conread position:
               2-356
               

               Cow position:
               chr11:50153032-50152668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 176
               

               Conread position:
               2-356
               

               Cow position:
               chr11:52297437-52297078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 195
               

               Conread position:
               2-399
               

               Cow position:
               chr11:40818852-40818441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 29
               

               Conread position:
               2-404
               

               Cow position:
               chr11:27746707-27747113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 166
               

               Conread position:
               2-412
               

               Cow position:
               chr11:64334644-64335035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               249, 30
               

               Conread position:
               2-415
               

               Cow position:
               chr11:27405282-27404868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 109
               

               Conread position:
               2-416
               

               Cow position:
               chr11:84184517-84184931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               234
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               83, 153
               

               Conread position:
               2-419
               

               Cow position:
               chr11:65762810-65762373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 41
               

               Conread position:
               2-440
               

               Cow position:
               chr11:35154041-35153589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 175
               

               Conread position:
               3-267
               

               Cow position:
               chr11:31525651-31525930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               3-267
               

               Cow position:
               chr11:41812125-41811863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               81, 114
               

               Conread position:
               3-294
               

               Cow position:
               chr11:23586422-23586717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               208
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               100, 132
               

               Conread position:
               4-120
               

               Cow position:
               chr11:62376649-62376534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               4-140
               

               Cow position:
               chr11:30172160-30172293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               4-162
               

               Cow position:
               chr11:84924310-84924147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 146
               

               Conread position:
               4-169
               

               Cow position:
               chr11:25807970-25807800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 113
               

               Conread position:
               4-180
               

               Cow position:
               chr11:38831582-38831399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               80, 6
               

               Conread position:
               4-183
               

               Cow position:
               chr11:38053588-38053408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 149
               

               Conread position:
               4-185
               

               Cow position:
               chr11:19216158-19215974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               81, 151
               

               Conread position:
               4-185
               

               Cow position:
               chr11:54178749-54178563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               62, 126
               

               Conread position:
               4-186
               

               Cow position:
               chr11:8564186-8564003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               81, 125
               

               Conread position:
               4-187
               

               Cow position:
               chr11:1486078-1485895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               86, 37
               

               Conread position:
               4-188
               

               Cow position:
               chr11:72314334-72314519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               81, 166
               

               Conread position:
               4-188
               

               Cow position:
               chr11:74929568-74929754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 164
               

               Conread position:
               4-193
               

               Cow position:
               chr11:37100571-37100379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 40
               

               Conread position:
               4-204
               

               Cow position:
               chr11:58102986-58102786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               84, 109
               

               Conread position:
               4-207
               

               Cow position:
               chr11:68631906-68631700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               81, 125
               

               Conread position:
               4-211
               

               Cow position:
               chr11:30110756-30110958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               102, 50
               

               Conread position:
               4-211
               

               Cow position:
               chr11:48697236-48697444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               80, 35
               

               Conread position:
               4-211
               

               Cow position:
               chr11:48932795-48932591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               111, 37
               

               Conread position:
               4-216
               

               Cow position:
               chr11:4389214-4389424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               81, 127
               

               Conread position:
               4-216
               

               Cow position:
               chr11:47165349-47165140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               149, 62
               

               Conread position:
               4-229
               

               Cow position:
               chr11:62979266-62979504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               4-235
               

               Cow position:
               chr11:7924801-7924569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               80, 113
               

               Conread position:
               4-235
               

               Cow position:
               chr11:18389074-18388853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               4-235
               

               Cow position:
               chr11:38810562-38810329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               95, 171
               

               Conread position:
               4-261
               

               Cow position:
               chr11:38641667-38641928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               55, 152
               

               Conread position:
               4-262
               

               Cow position:
               chr11:64090298-64090050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               134, 117
               

               Conread position:
               4-264
               

               Cow position:
               chr11:3726074-3726337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               80, 40
               

               Conread position:
               4-264
               

               Cow position:
               chr11:21437416-21437674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 147
               

               Conread position:
               4-264
               

               Cow position:
               chr11:23385456-23385194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               81, 27
               

               Conread position:
               4-264
               

               Cow position:
               chr11:26483507-26483760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               80, 20
               

               Conread position:
               4-264
               

               Cow position:
               chr11:30764268-30764539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               81, 188
               

               Conread position:
               4-264
               

               Cow position:
               chr11:38843352-38843618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               81, 126
               

               Conread position:
               4-264
               

               Cow position:
               chr11:70273089-70273355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               83, 50
               

               Conread position:
               4-265
               

               Cow position:
               chr11:5031989-5031726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               80, 174
               

               Conread position:
               4-266
               

               Cow position:
               chr11:21497329-21497573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               139, 22
               

               Conread position:
               4-267
               

               Cow position:
               chr11:6835317-6835585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               80, 102
               

               Conread position:
               4-267
               

               Cow position:
               chr11:57725040-57724773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               80, 166
               

               Conread position:
               4-268
               

               Cow position:
               chr11:30295066-30295333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               81, 151
               

               Conread position:
               4-269
               

               Cow position:
               chr11:14094636-14094366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               14, 54
               

               Conread position:
               4-271
               

               Cow position:
               chr11:31226005-31225756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               4-283
               

               Cow position:
               chr11:6234090-6233812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               80, 32
               

               Conread position:
               4-283
               

               Cow position:
               chr11:9221937-9221664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               102, 36
               

               Conread position:
               4-283
               

               Cow position:
               chr11:52983479-52983743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               109, 45
               

               Conread position:
               4-291
               

               Cow position:
               chr11:36981356-36981637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               80, 40
               

               Conread position:
               4-291
               

               Cow position:
               chr11:61202951-61203239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               82, 102
               

               Conread position:
               4-306
               

               Cow position:
               chr11:23138273-23137966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               80, 21
               

               Conread position:
               4-328
               

               Cow position:
               chr11:56518524-56518192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               69, 214
               

               Conread position:
               4-328
               

               Cow position:
               chr11:63847638-63847957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               118, 55
               

               Conread position:
               4-348
               

               Cow position:
               chr11:8988441-8988099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               4-348
               

               Cow position:
               chr11:30639160-30638815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               227
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               80, 131
               

               Conread position:
               4-349
               

               Cow position:
               chr11:3780636-3780276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               85, 102
               

               Conread position:
               4-349
               

               Cow position:
               chr11:81281733-81282091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               100, 288
               

               Conread position:
               4-356
               

               Cow position:
               chr11:866088-866425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               84, 110
               

               Conread position:
               4-356
               

               Cow position:
               chr11:4674662-4674299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               81, 177
               

               Conread position:
               4-356
               

               Cow position:
               chr11:5485796-5486158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               81, 33
               

               Conread position:
               4-356
               

               Cow position:
               chr11:7458495-7458135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               239
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               80, 11
               

               Conread position:
               4-356
               

               Cow position:
               chr11:17860365-17860008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               80, 24
               

               Conread position:
               4-356
               

               Cow position:
               chr11:35347969-35347606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               252
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               81, 163
               

               Conread position:
               4-356
               

               Cow position:
               chr11:42292047-42291695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               100, 144
               

               Conread position:
               4-356
               

               Cow position:
               chr11:70382907-70382544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               80, 176
               

               Conread position:
               4-356
               

               Cow position:
               chr11:83043572-83043222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               118, 39
               

               Conread position:
               4-359
               

               Cow position:
               chr11:46748078-46747711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               4-361
               

               Cow position:
               chr11:65607905-65607543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               249
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               118, 163
               

               Conread position:
               4-366
               

               Cow position:
               chr11:4207101-4207473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 38
               

               Conread position:
               4-379
               

               Cow position:
               chr11:19247406-19247036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               80, 32
               

               Conread position:
               4-394
               

               Cow position:
               chr11:35580042-35580444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 171
               

               Conread position:
               4-402
               

               Cow position:
               chr11:10095133-10095535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               4-406
               

               Cow position:
               chr11:40969-41365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 99
               

               Conread position:
               4-406
               

               Cow position:
               chr11:42083268-42083647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               77, 48
               

               Conread position:
               4-407
               

               Cow position:
               chr11:42884982-42884588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               81, 49
               

               Conread position:
               4-408
               

               Cow position:
               chr11:62490222-62490622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               283
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               118, 50
               

               Conread position:
               4-409
               

               Cow position:
               chr11:33287173-33286753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               4-415
               

               Cow position:
               chr11:46329288-46329703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               81, 12
               

               Conread position:
               4-415
               

               Cow position:
               chr11:62620173-62620580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 33
               

               Conread position:
               4-425
               

               Cow position:
               chr11:17889938-17889515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               280
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               80, 27
               

               Conread position:
               5-119
               

               Cow position:
               chr11:26277301-26277190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               5-119
               

               Cow position:
               chr11:37118274-37118390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               5-120
               

               Cow position:
               chr11:15608504-15608389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               5-160
               

               Cow position:
               chr11:83033911-83033758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               5-188
               

               Cow position:
               chr11:6392216-6392030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               29, 126
               

               Conread position:
               5-256
               

               Cow position:
               chr11:77766812-77766554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               79, 45
               

               Conread position:
               5-258
               

               Cow position:
               chr11:42793186-42792930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 156
               

               Conread position:
               5-259
               

               Cow position:
               chr11:16910577-16910315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               80, 161
               

               Conread position:
               5-266
               

               Cow position:
               chr11:17831438-17831171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               39, 166
               

               Conread position:
               5-266
               

               Cow position:
               chr11:23128750-23128489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               117, 50
               

               Conread position:
               5-267
               

               Cow position:
               chr11:29916327-29916593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               83, 39
               

               Conread position:
               5-267
               

               Cow position:
               chr11:83357180-83357446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               79, 117
               

               Conread position:
               5-279
               

               Cow position:
               chr11:7538854-7538572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               79, 167
               

               Conread position:
               5-283
               

               Cow position:
               chr11:1362691-1362400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               5-283
               

               Cow position:
               chr11:41271928-41272205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               110, 98
               

               Conread position:
               5-283
               

               Cow position:
               chr11:48474497-48474771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               79, 26
               

               Conread position:
               5-291
               

               Cow position:
               chr11:10687098-10686813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               79, 100
               

               Conread position:
               5-293
               

               Cow position:
               chr11:36238571-36238855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               111, 17
               

               Conread position:
               5-296
               

               Cow position:
               chr11:36286488-36286775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               79, 47
               

               Conread position:
               5-299
               

               Cow position:
               chr11:30120872-30120577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               117, 36
               

               Conread position:
               5-307
               

               Cow position:
               chr11:10213776-10213470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 65
               

               Conread position:
               5-307
               

               Cow position:
               chr11:34829989-34829697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               5-335
               

               Cow position:
               chr11:58990300-58990619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               79, 36
               

               Conread position:
               5-355
               

               Cow position:
               chr11:80820209-80819876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               133, 54
               

               Conread position:
               5-416
               

               Cow position:
               chr11:26067390-26066980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 40
               

               Conread position:
               5-430
               

               Cow position:
               chr11:84385857-84385416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               288
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               51, 170
               

               Conread position:
               5-435
               

               Cow position:
               chr11:8495826-8496258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               281
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               79, 157
               

               Conread position:
               6-211
               

               Cow position:
               chr11:71455578-71455788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               68, 153
               

               Conread position:
               6-266
               

               Cow position:
               chr11:63434268-63434007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               100, 155
               

               Conread position:
               6-267
               

               Cow position:
               chr11:875805-875545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               78, 51
               

               Conread position:
               6-267
               

               Cow position:
               chr11:32749898-32750162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 170
               

               Conread position:
               6-267
               

               Cow position:
               chr11:50236177-50235925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               78, 36
               

               Conread position:
               6-294
               

               Cow position:
               chr11:44636969-44636675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 16
               

               Conread position:
               6-325
               

               Cow position:
               chr11:61958959-61958637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               78, 144
               

               Conread position:
               6-356
               

               Cow position:
               chr11:21844345-21843994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               116, 134
               

               Conread position:
               6-356
               

               Cow position:
               chr11:80564095-80564442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               244
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               173, 63
               

               Conread position:
               6-415
               

               Cow position:
               chr11:2907731-2907321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 164
               

               Conread position:
               7-170
               

               Cow position:
               chr11:84198881-84198713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               7-212
               

               Cow position:
               chr11:36672259-36672047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 160
               

               Conread position:
               7-232
               

               Cow position:
               chr11:37347265-37347495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               77, 169
               

               Conread position:
               7-266
               

               Cow position:
               chr11:16843214-16842933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               104, 88
               

               Conread position:
               7-267
               

               Cow position:
               chr11:3720043-3720305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 99
               

               Conread position:
               7-267
               

               Cow position:
               chr11:44818888-44819145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               77, 156
               

               Conread position:
               7-307
               

               Cow position:
               chr11:63469674-63469964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               119, 32
               

               Conread position:
               7-322
               

               Cow position:
               chr11:67747073-67747394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               115, 160
               

               Conread position:
               8-163
               

               Cow position:
               chr11:43524413-43524568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               76, 36
               

               Conread position:
               8-266
               

               Cow position:
               chr11:8428287-8428562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               75, 48
               

               Conread position:
               8-266
               

               Cow position:
               chr11:45631972-45631715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               107, 206
               

               Conread position:
               8-283
               

               Cow position:
               chr11:10620535-10620260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 63
               

               Conread position:
               8-356
               

               Cow position:
               chr11:24601763-24602105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               243
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               130, 103
               

               Conread position:
               8-415
               

               Cow position:
               chr11:71493068-71492656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               64, 162
               

               Conread position:
               8-431
               

               Cow position:
               chr11:30165299-30165731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               76, 153
               

               Conread position:
               9-264
               

               Cow position:
               chr11:9463622-9463884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 244
               

               Conread position:
               9-402
               

               Cow position:
               chr11:259387-258983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               273
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               47, 314
               

               Conread position:
               12-356
               

               Cow position:
               chr11:68912939-68913288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               81, 37
               

               Conread position:
               13-212
               

               Cow position:
               chr11:81340703-81340508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               157, 100
               

               Conread position:
               14-280
               

               Cow position:
               chr11:72375890-72375620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               89, 260
               

               Conread position:
               14-328
               

               Cow position:
               chr11:70609586-70609909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               70, 16
               

               Conread position:
               14-400
               

               Cow position:
               chr11:45277358-45276960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               71, 154
               

               Conread position:
               14-409
               

               Cow position:
               chr11:38334313-38334721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               70, 165
               

               Conread position:
               14-412
               

               Cow position:
               chr11:19592199-19591793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               69, 155
               

               Conread position:
               14-420
               

               Cow position:
               chr11:64077703-64077292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               269
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               71, 7
               

               Conread position:
               14-447
               

               Cow position:
               chr11:77758962-77758521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 63
               

               Conread position:
               15-197
               

               Cow position:
               chr11:47850826-47851008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               107, 17
               

               Conread position:
               15-259
               

               Cow position:
               chr11:5088050-5087802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               9, 145
               

               Conread position:
               15-356
               

               Cow position:
               chr11:3393412-3393069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 56
               

               Conread position:
               16-193
               

               Cow position:
               chr11:33364142-33364321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 115
               

               Conread position:
               16-214
               

               Cow position:
               chr11:8936687-8936491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 9
               

               Conread position:
               16-226
               

               Cow position:
               chr11:42898030-42898237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               69, 93
               

               Conread position:
               16-328
               

               Cow position:
               chr11:27764953-27765263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               55, 88
               

               Conread position:
               16-381
               

               Cow position:
               chr11:41215544-41215904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               17-293
               

               Cow position:
               chr11:66425086-66424802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               19, 31
               

               Conread position:
               17-306
               

               Cow position:
               chr11:18572605-18572888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               105, 39
               

               Conread position:
               17-411
               

               Cow position:
               chr11:55052683-55053071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 97
               

               Conread position:
               18-264
               

               Cow position:
               chr11:49231676-49231922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               66, 86
               

               Conread position:
               18-268
               

               Cow position:
               chr11:80761581-80761325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 170
               

               Conread position:
               18-328
               

               Cow position:
               chr11:28643881-28644204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 35
               

               Conread position:
               20-261
               

               Cow position:
               chr11:2874190-2874443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               65, 144
               

               Conread position:
               22-273
               

               Cow position:
               chr11:3702754-3703008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 48
               

               Conread position:
               22-413
               

               Cow position:
               chr11:14649510-14649105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               62, 45
               

               Conread position:
               23-242
               

               Cow position:
               chr11:955170-955394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               23-401
               

               Cow position:
               chr11:47639223-47638835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               62, 46
               

               Conread position:
               23-406
               

               Cow position:
               chr11:83397704-83398105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               64, 150
               

               Conread position:
               24-283
               

               Cow position:
               chr11:77128468-77128728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               138, 31
               

               Conread position:
               24-381
               

               Cow position:
               chr11:74316519-74316877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               98, 32
               

               Conread position:
               24-408
               

               Cow position:
               chr11:13592542-13592940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               60, 136
               

               Conread position:
               25-264
               

               Cow position:
               chr11:20684770-20684523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               59, 159
               

               Conread position:
               26-162
               

               Cow position:
               chr11:19508103-19508243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               26-256
               

               Cow position:
               chr11:22932165-22931930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               5, 30
               

               Conread position:
               26-264
               

               Cow position:
               chr11:25386871-25387117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               84, 73
               

               Conread position:
               26-293
               

               Cow position:
               chr11:48496774-48496515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               182, 35
               

               Conread position:
               26-311
               

               Cow position:
               chr11:11232647-11232359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               80, 128
               

               Conread position:
               26-356
               

               Cow position:
               chr11:49152758-49153085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               5, 135
               

               Conread position:
               26-414
               

               Cow position:
               chr11:62239554-62239944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 77
               

               Conread position:
               26-420
               

               Cow position:
               chr11:27913080-27913496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               268
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               27-269
               

               Cow position:
               chr11:3833545-3833309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               12, 55
               

               Conread position:
               27-290
               

               Cow position:
               chr11:23272193-23271929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               29, 157
               

               Conread position:
               29-320
               

               Cow position:
               chr11:35874181-35873900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               152, 93
               

               Conread position:
               29-352
               

               Cow position:
               chr11:65157600-65157264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               77, 5
               

               Conread position:
               29-356
               

               Cow position:
               chr11:17227835-17227506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               133, 102
               

               Conread position:
               29-396
               

               Cow position:
               chr11:2917775-2917408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 140
               

               Conread position:
               29-418
               

               Cow position:
               chr11:34646402-34646803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 84
               

               Conread position:
               30-328
               

               Cow position:
               chr11:37804743-37804437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               54, 286
               

               Conread position:
               30-407
               

               Cow position:
               chr11:13061418-13061058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               328, 97
               

               Conread position:
               30-410
               

               Cow position:
               chr11:33348374-33347996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               263
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               54, 138
               

               Conread position:
               31-274
               

               Cow position:
               chr11:70836558-70836317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               31-279
               

               Cow position:
               chr11:34962873-34963133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               40, 219
               

               Conread position:
               31-356
               

               Cow position:
               chr11:68207026-68206701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               125, 113
               

               Conread position:
               33-264
               

               Cow position:
               chr11:1157459-1157692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 140
               

               Conread position:
               35-328
               

               Cow position:
               chr11:2932969-2933259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 124
               

               Conread position:
               35-328
               

               Cow position:
               chr11:30954815-30955113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               59, 144
               

               Conread position:
               37-264
               

               Cow position:
               chr11:81611588-81611817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 128
               

               Conread position:
               37-327
               

               Cow position:
               chr11:26845762-26845479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               145, 23
               

               Conread position:
               37-381
               

               Cow position:
               chr11:67600601-67600949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               67, 144
               

               Conread position:
               37-413
               

               Cow position:
               chr11:7873966-7874344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               48, 122
               

               Conread position:
               38-293
               

               Cow position:
               chr11:5286-5541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               38-356
               

               Cow position:
               chr11:26144279-26143949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               46, 109
               

               Conread position:
               38-367
               

               Cow position:
               chr11:82940802-82940470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 86
               

               Conread position:
               39-285
               

               Cow position:
               chr11:70086145-70086402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 232
               

               Conread position:
               39-356
               

               Cow position:
               chr11:38670503-38670835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 173
               

               Conread position:
               39-398
               

               Cow position:
               chr11:9270907-9270548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               49, 189
               

               Conread position:
               41-214
               

               Cow position:
               chr11:59156056-59155878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               81, 107
               

               Conread position:
               41-293
               

               Cow position:
               chr11:62225810-62226064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               83, 11
               

               Conread position:
               41-418
               

               Cow position:
               chr11:1625395-1625010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               120, 71
               

               Conread position:
               42-194
               

               Cow position:
               chr11:30753648-30753499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               125, 18
               

               Conread position:
               43-266
               

               Cow position:
               chr11:53553064-53553269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               43-283
               

               Cow position:
               chr11:63909833-63909599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               44, 92
               

               Conread position:
               43-354
               

               Cow position:
               chr11:28993904-28993605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               69, 19
               

               Conread position:
               43-366
               

               Cow position:
               chr11:30830791-30830462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 265
               

               Conread position:
               44-264
               

               Cow position:
               chr11:71008961-71009177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               40, 103
               

               Conread position:
               44-267
               

               Cow position:
               chr11:74380020-74380241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               40, 83
               

               Conread position:
               45-417
               

               Cow position:
               chr11:76889875-76890251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               43, 121
               

               Conread position:
               45-437
               

               Cow position:
               chr11:2083963-2084376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               39, 277
               

               Conread position:
               46-264
               

               Cow position:
               chr11:41176122-41175900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               60, 132
               

               Conread position:
               46-291
               

               Cow position:
               chr11:59862040-59862281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 70
               

               Conread position:
               46-356
               

               Cow position:
               chr11:77319240-77319557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               76, 251
               

               Conread position:
               47-279
               

               Cow position:
               chr11:16907214-16906987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               75, 39
               

               Conread position:
               48-243
               

               Cow position:
               chr11:85986341-85986144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               78, 135
               

               Conread position:
               49-413
               

               Cow position:
               chr11:75874921-75874569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               89, 54
               

               Conread position:
               50-406
               

               Cow position:
               chr11:55494514-55494859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               81, 11
               

               Conread position:
               51-354
               

               Cow position:
               chr11:80556053-80556361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               71, 143
               

               Conread position:
               52-361
               

               Cow position:
               chr11:81135328-81135019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               70, 17
               

               Conread position:
               53-413
               

               Cow position:
               chr11:48295867-48296227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               255
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               58, 116
               

               Conread position:
               56-266
               

               Cow position:
               chr11:11646907-11647123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               65, 142
               

               Conread position:
               56-354
               

               Cow position:
               chr11:56187457-56187750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               66, 161
               

               Conread position:
               56-356
               

               Cow position:
               chr11:17493316-17493628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               51, 44
               

               Conread position:
               56-361
               

               Cow position:
               chr11:42296780-42296478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               66, 119
               

               Conread position:
               58-347
               

               Cow position:
               chr11:45434926-45435213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               123, 64
               

               Conread position:
               59-356
               

               Cow position:
               chr11:71390723-71390429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               61, 209
               

               Conread position:
               59-417
               

               Cow position:
               chr11:2576063-2575700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               232
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               63, 93
               

               Conread position:
               61-264
               

               Cow position:
               chr11:46580198-46580406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               61-356
               

               Cow position:
               chr11:39499201-39499500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               116, 46
               

               Conread position:
               61-356
               

               Cow position:
               chr11:51729131-51729419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               61, 105
               

               Conread position:
               62-356
               

               Cow position:
               chr11:44222734-44223029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               83, 59
               

               Conread position:
               63-214
               

               Cow position:
               chr11:70741131-70740978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               59, 106
               

               Conread position:
               63-358
               

               Cow position:
               chr11:35213316-35213022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               121, 22
               

               Conread position:
               66-323
               

               Cow position:
               chr11:69075756-69076022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               46, 164
               

               Conread position:
               66-356
               

               Cow position:
               chr11:18851766-18852048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               115, 56
               

               Conread position:
               67-356
               

               Cow position:
               chr11:70250774-70251061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               197
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               153, 52
               

               Conread position:
               72-360
               

               Cow position:
               chr11:23407315-23407609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               38, 234
               

               Conread position:
               77-294
               

               Cow position:
               chr11:65767056-65767278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               79-332
               

               Cow position:
               chr11:47772531-47772275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               36, 201
               
UCSC Genome Browser
               Conread position:
               83-405
               

               Cow position:
               chr11:62788993-62789321 (view  custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 251
               
UCSC Genome Browser
               
               
               
Conread position: 109-327

               
               
               
Cow position: chr11:28168529-28168313 (view  custom track)

               
               
               
Alignm length: 221

               
               
               
Alignm identity: 154

               
               
               
Alignm E-value: 3e-27

               
               
               
Alignm gaps (pig, cow): 56, 25
UCSC Genome Browser
               
               
               
Conread position: 109-400

               
               
               
Cow position: chr11:30493894-30494182 (view  custom track)

               
               
               
Alignm length: 299

               
               
               
Alignm identity: 200

               
               
               
Alignm E-value: 2e-24

               
               
               
Alignm gaps (pig, cow): 171, 9

               
               
               Conread position:113-354
               
               
               Cow position:chr11:17036631-17036389 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:174
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):51, 57

               
               
               Conread position:114-430
               
               
               Cow position:chr11:39060701-39060386 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:214
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):18, 48

               
               
               Conread position:115-356
               
               
               Cow position:chr11:31410984-31410735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:122-434
               
               
               Cow position:chr11:8437782-8437463 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:209
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):173, 42

               
               
               Conread position:124-356
               
               
               Cow position:chr11:42160151-42159915 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:165
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):32, 44

               
               
               Conread position:127-288
               
               
               Cow position:chr11:11045121-11044959 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:117
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):54, 100

               
               
               Conread position:127-403
               
               
               Cow position:chr11:63999177-63998894 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:196
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):54, 79

               
               
               Conread position:128-356
               
               
               Cow position:chr11:33409347-33409118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):167, 34

               
               
               Conread position:131-356
               
               
               Cow position:chr11:82740424-82740640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):28, 46

               
               
               Conread position:133-266
               
               
               Cow position:chr11:54218635-54218765 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:135
               
               
               Alignm identity:104
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):49, 34

               
               
               Conread position:133-328
               
               
               Cow position:chr11:35803052-35803241 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:145
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):48, 104

               
               
               Conread position:133-427
               
               
               Cow position:chr11:17676452-17676154 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:195
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):180, 29

               
               
               Conread position:134-356
               
               
               Cow position:chr11:17721885-17721656 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:158
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):36, 0

               
               
               Conread position:139-360
               
               
               Cow position:chr11:4637249-4637026 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:148
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:139-406
               
               
               Cow position:chr11:30867105-30867372 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):31, 158

               
               
               Conread position:151-413
               
               
               Cow position:chr11:25119997-25119734 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:182
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):14, 26

               
               
               Conread position:169-356
               
               
               Cow position:chr11:21885785-21885978 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):10, 89
Show alignments to all cow chromosomes.
Conread position:	1-71
Cow position:	chr11:2576369-2576299 (view UCSC Genome Browser custom track)
Alignm length:	71
Alignm identity:	68
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	0, 0
Conread position:	1-95
Cow position:	chr11:78480582-78480677 (view UCSC Genome Browser custom track)
Alignm length:	96
Alignm identity:	81
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	23, 0
Conread position:	1-101
Cow position:	chr11:64405551-64405451 (view UCSC Genome Browser custom track)
Alignm length:	101
Alignm identity:	88
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	0, 0
Conread position:	1-114
Cow position:	chr11:374954-375064 (view UCSC Genome Browser custom track)
Alignm length:	115
Alignm identity:	93
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	105, 40
Conread position:	1-115
Cow position:	chr11:75510448-75510335 (view UCSC Genome Browser custom track)
Alignm length:	115
Alignm identity:	97
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	102, 0
Conread position:	1-125
Cow position:	chr11:16795367-16795245 (view UCSC Genome Browser custom track)
Alignm length:	125
Alignm identity:	97
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	68, 0
Conread position:	1-153
Cow position:	chr11:55348048-55348206 (view UCSC Genome Browser custom track)
Alignm length:	159
Alignm identity:	117
Alignm E-value:	5e-22
Alignm gaps (pig, cow):	103, 0
Conread position:	1-155
Cow position:	chr11:35363280-35363439 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	121
Alignm E-value:	7e-25
Alignm gaps (pig, cow):	92, 0
Conread position:	1-158
Cow position:	chr11:70617635-70617793 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	119
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	83, 58
Conread position:	1-163
Cow position:	chr11:25336860-25337025 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	123
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	83, 105
Conread position:	1-170
Cow position:	chr11:40860931-40860753 (view UCSC Genome Browser custom track)
Alignm length:	179
Alignm identity:	128
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	39, 0
Conread position:	1-173
Cow position:	chr11:41598942-41598766 (view UCSC Genome Browser custom track)
Alignm length:	177
Alignm identity:	129
Alignm E-value:	9e-27
Alignm gaps (pig, cow):	121, 0
Conread position:	1-179
Cow position:	chr11:25165229-25165407 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	147
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	121, 21
Conread position:	1-185
Cow position:	chr11:30866924-30867111 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	137
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	121, 85
Conread position:	1-186
Cow position:	chr11:63520558-63520745 (view UCSC Genome Browser custom track)
Alignm length:	191
Alignm identity:	140
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	121, 58
Conread position:	1-192
Cow position:	chr11:71846564-71846369 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	150
Alignm E-value:	6e-33
Alignm gaps (pig, cow):	6, 167
Conread position:	1-197
Cow position:	chr11:5526789-5526589 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	144
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	84, 176
Conread position:	1-198
Cow position:	chr11:38193937-38194140 (view UCSC Genome Browser custom track)
Alignm length:	204
Alignm identity:	140
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	94, 0
Conread position:	1-199
Cow position:	chr11:75748220-75748418 (view UCSC Genome Browser custom track)
Alignm length:	205
Alignm identity:	148
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	83, 24
Conread position:	1-200
Cow position:	chr11:6580599-6580803 (view UCSC Genome Browser custom track)
Alignm length:	205
Alignm identity:	142
Alignm E-value:	7e-24
Alignm gaps (pig, cow):	84, 0