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Cow genome map

           
Conread name:
           
Ss1.1-rthg23_l8.5
        

               
Conread position:
               
1-91
               

               
Cow position:
               
chr16:20662950-20663040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
91
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-106
               

               
Cow position:
               
chr16:22206740-22206846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
1-124
               

               
Cow position:
               
chr16:5293466-5293587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
114, 44
               

               
Conread position:
               
1-144
               

               
Cow position:
               
chr16:29399798-29399948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr16:48424795-48424946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
84, 96
               

               
Conread position:
               
1-164
               

               
Cow position:
               
chr16:49141754-49141597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
1-165
               

               
Cow position:
               
chr16:24143133-24142968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 114
               

               
Conread position:
               
1-169
               

               
Cow position:
               
chr16:44831328-44831497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 120
               

               
Conread position:
               
1-170
               

               
Cow position:
               
chr16:51578616-51578445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
108, 168
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr16:30587576-30587755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
84, 128
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr16:6379306-6379125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
130, 23
               

               
Conread position:
               
1-181
               

               
Cow position:
               
chr16:52227293-52227111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 165
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr16:54322074-54321887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
6, 154
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr16:17665437-17665630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr16:50383006-50383190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr16:5352028-5351845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr16:4293516-4293706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 156
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr16:4134670-4134870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr16:5654312-5654506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
83, 105
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr16:50189790-50189594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 167
               

               
Conread position:
               
1-197
               

               
Cow position:
               
chr16:39385205-39385410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr16:9790827-9790624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr16:14028816-14028622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
121, 21
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr16:42253769-42253551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr16:43804301-43804503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr16:4277910-4277698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr16:43537542-43537754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 159
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr16:4712704-4712915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
5, 52
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr16:13791317-13791532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
82, 179
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr16:24228546-24228337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
94, 35
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr16:30143409-30143191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
82, 171
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr16:30705910-30706122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 154
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr16:53595718-53595508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:957094-956877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 14
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr16:39705036-39704821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr16:4103354-4103143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
105, 40
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr16:30311305-30311087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr16:22868371-22868136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 26
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr16:27249214-27249453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr16:11274713-11274953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
180, 36
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr16:49404351-49404108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
170, 122
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:21904966-21905214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
115, 164
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr16:12085977-12085740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr16:27670976-27671235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
112, 76
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr16:9729008-9729260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr16:53553913-53553654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
83, 117
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr16:31978384-31978120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
84, 43
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr16:15504722-15504453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
83, 159
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr16:15762359-15762089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
84, 161
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr16:17745639-17745903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
121, 44
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr16:22692294-22692557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 46
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr16:24023495-24023230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
80, 154
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr16:26373147-26372884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr16:37380075-37380337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr16:38787064-38787327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
84, 53
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr16:42217886-42217623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
84, 152
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:11105353-11105622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:13233141-13232881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 40
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr16:48191197-48190944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
121, 40
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:9973698-9973430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
121, 177
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:11775246-11774979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:13752319-13752063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 21
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:15960491-15960221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 177
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:18758040-18757770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
93, 211
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:30037191-30036922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
99, 221
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:33507867-33508141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
188, 130
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:35623441-35623181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
121, 134
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:39165049-39165308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
83, 21
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr16:51113073-51112811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr16:675297-675560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 125
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr16:16552366-16552631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr16:24672557-24672288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
85, 167
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr16:29380058-29380320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr16:33753233-33753500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 106
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr16:35195807-35195543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
21, 126
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr16:39695673-39695413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
85, 116
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr16:53813855-53813583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr16:11790817-11791086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
161, 130
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr16:24702656-24702927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr16:56831937-56831665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 118
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr16:30096326-30096056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
1-277
               

               
Cow position:
               
chr16:54673041-54673321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr16:18354148-18353872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr16:32327456-32327744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 40
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr16:39514274-39513990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 7
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr16:48492987-48493266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
1-285
               

               
Cow position:
               
chr16:51869442-51869727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr16:571113-570824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
121, 167
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr16:5256800-5257092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 111
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr16:48370144-48369856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
112, 27
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr16:48494752-48494447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 51
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:7702335-7702629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
82, 112
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr16:19003716-19003403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
110, 126
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr16:24825874-24826207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
121, 48
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr16:43105709-43105386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
1-329
               

               
Cow position:
               
chr16:40562031-40562361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 294
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr16:7456661-7456320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
23, 169
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr16:17626734-17627071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr16:8840696-8841048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
88, 55
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr16:37452814-37452462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
93, 39
               

               
Conread position:
               
1-352
               

               
Cow position:
               
chr16:33482242-33482607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr16:25170194-25170553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
108, 52
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr16:49229964-49229610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
121, 33
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr16:820055-820412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
87, 40
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr16:1549074-1548720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
46, 86
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr16:13307062-13306710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
180, 39
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr16:15824638-15824281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
111, 46
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr16:45609791-45610149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
84, 78
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:4192615-4192269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
89, 25
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:4972221-4971859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
87, 145
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:8066077-8065723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:14685585-14685229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
105, 38
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:24128505-24128869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 161
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:26676886-26676527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
83, 53
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:33645818-33646177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
140, 51
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:35343672-35343310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 146
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:41752769-41752419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 33
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:45677048-45676709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
121, 30
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:45813897-45813536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
95, 38
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:48095960-48095607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 16
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:50906271-50906640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
83, 166
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:52275326-52274973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
119, 36
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:56522669-56522311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr16:56850143-56850510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 195
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr16:23563941-23564300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
81, 28
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr16:3047542-3047176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
22, 150
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr16:4275942-4275576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
22, 150
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr16:48006687-48006327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 113
               

               
Conread position:
               
1-365
               

               
Cow position:
               
chr16:29158932-29159288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
83, 57
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr16:4059163-4059539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
125, 51
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr16:43308765-43308387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
86, 184
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr16:49217761-49217388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
41, 166
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr16:17142736-17143114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
83, 172
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr16:51598799-51598426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
121, 43
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr16:53428057-53428459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 165
               

               
Conread position:
               
1-398
               

               
Cow position:
               
chr16:2750795-2751182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
82, 143
               

               
Conread position:
               
1-399
               

               
Cow position:
               
chr16:11957780-11957372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chr16:4857286-4856892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 37
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr16:10552882-10552480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 154
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr16:29655129-29655523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 112
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr16:31117816-31117410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
69, 41
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr16:40333521-40333126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 85
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr16:5896223-5896629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
121, 38
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr16:15370483-15370894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
83, 30
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr16:51710324-51709935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
133, 30
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr16:56126976-56126562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 54
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr16:8959259-8958843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
84, 161
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr16:45731571-45731189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
168, 61
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr16:46655086-46655501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
84, 11
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr16:7582516-7582936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
64, 125
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr16:7136548-7136125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
1-417
               

               
Cow position:
               
chr16:49125720-49125298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
121, 30
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr16:7665435-7665863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
83, 296
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr16:55683097-55683521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
79, 57
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr16:26610437-26610870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
30, 133
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr16:38663908-38663479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
92, 165
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr16:48385598-48385188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
118, 56
               

               
Conread position:
               
1-420
               

               
Cow position:
               
chr16:49126380-49125968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
110, 30
               

               
Conread position:
               
1-424
               

               
Cow position:
               
chr16:13698312-13698752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 180
               

               
Conread position:
               
1-433
               

               
Cow position:
               
chr16:38905422-38904982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr16:1410343-1410526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 128
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr16:25472677-25472860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 127
               

               
Conread position:
               
2-185
               

               
Cow position:
               
chr16:45566426-45566613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 176
               

               
Conread position:
               
2-186
               

               
Cow position:
               
chr16:16543877-16544054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
2-190
               

               
Cow position:
               
chr16:54598065-54598244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
161, 41
               

               
Conread position:
               
2-207
               

               
Cow position:
               
chr16:31159773-31159562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
51, 168
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:6342400-6342186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:7157916-7158130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 184
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:7476382-7476596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:8658950-8658736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:8884682-8884896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:10844354-10844140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 184
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:16210109-16209896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:18650247-18650034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 59
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:21656120-21655903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 177
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:26132840-26132626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:26977929-26977714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:28420086-28419874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
110, 152
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:34021515-34021301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:34208880-34208666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:35284930-35284718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 151
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:41703096-41703310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr16:53644586-53644372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr16:15974026-15973801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr16:6800507-6800280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr16:21012113-21011886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr16:24752590-24752363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr16:26659306-26659533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr16:24147959-24148193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr16:41576846-41577076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr16:15786170-15785939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 174
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr16:14040758-14040993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr16:31656631-31656866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr16:42161589-42161355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 152
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr16:42379359-42379596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-247
               

               
Cow position:
               
chr16:42777768-42778014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
104, 191
               

               
Conread position:
               
2-252
               

               
Cow position:
               
chr16:42092571-42092332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
2-259
               

               
Cow position:
               
chr16:32906058-32906314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
113, 41
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr16:4981576-4981310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
120, 48
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr16:10352672-10352949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr16:56787973-56787709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
2-265
               

               
Cow position:
               
chr16:39394381-39394637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
180, 52
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr16:50417882-50417628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
2-267
               

               
Cow position:
               
chr16:8367019-8366761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 109
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr16:24855345-24855632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr16:32781167-32781459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
118, 168
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr16:33235330-33235068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr16:52789866-52790165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
159, 36
               

               
Conread position:
               
2-350
               

               
Cow position:
               
chr16:54679472-54679819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr16:23730134-23729758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
71, 110
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr16:38709022-38708676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
109, 33
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr16:39474333-39473996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr16:45677780-45678138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 102
               

               
Conread position:
               
2-355
               

               
Cow position:
               
chr16:48956602-48956959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
100, 41
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr16:16597367-16597721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
293, 80
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr16:26649829-26649470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 168
               

               
Conread position:
               
2-362
               

               
Cow position:
               
chr16:31122445-31122087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
29, 110
               

               
Conread position:
               
2-367
               

               
Cow position:
               
chr16:18679002-18679357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
107, 43
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr16:238066-238454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
22, 181
               

               
Conread position:
               
2-400
               

               
Cow position:
               
chr16:52169871-52170259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
293, 29
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr16:56231628-56232031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 146
               

               
Conread position:
               
2-426
               

               
Cow position:
               
chr16:47820376-47820803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 50
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr16:2479662-2479475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
61, 128
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr16:35937142-35937414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
119, 71
               

               
Conread position:
               
3-350
               

               
Cow position:
               
chr16:35758018-35758360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
282, 36
               

               
Conread position:
               
3-356
               

               
Cow position:
               
chr16:21450653-21451012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
81, 50
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr16:29712222-29712632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 41
               

               
Conread position:
               
3-418
               

               
Cow position:
               
chr16:42079036-42078625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 46
               

               
Conread position:
               
3-447
               

               
Cow position:
               
chr16:11008147-11008580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
119, 83
               

               
Conread position:
               
4-118
               

               
Cow position:
               
chr16:902080-901965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
4-120
               

               
Cow position:
               
chr16:24403537-24403659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
4-165
               

               
Cow position:
               
chr16:18499068-18498901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
4-170
               

               
Cow position:
               
chr16:11859654-11859484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
81, 167
               

               
Conread position:
               
4-170
               

               
Cow position:
               
chr16:43743134-43742969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
91, 42
               

               
Conread position:
               
4-172
               

               
Cow position:
               
chr16:25287884-25287711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
4-173
               

               
Cow position:
               
chr16:5474078-5474244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 57
               

               
Conread position:
               
4-178
               

               
Cow position:
               
chr16:40315929-40315753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 125
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr16:29051476-29051660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr16:47186363-47186178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
65, 127
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr16:39007432-39007259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 116
               

               
Conread position:
               
4-183
               

               
Cow position:
               
chr16:14570778-14570959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
81, 125
               

               
Conread position:
               
4-185
               

               
Cow position:
               
chr16:8652164-8652349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
81, 174
               

               
Conread position:
               
4-187
               

               
Cow position:
               
chr16:16424797-16424612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
108, 51
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr16:18686065-18686250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
81, 92
               

               
Conread position:
               
4-188
               

               
Cow position:
               
chr16:45107694-45107881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 172
               

               
Conread position:
               
4-207
               

               
Cow position:
               
chr16:16177625-16177828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr16:18937060-18936853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
4-208
               

               
Cow position:
               
chr16:18978522-18978729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr16:18698812-18699023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr16:44973302-44973509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
4-215
               

               
Cow position:
               
chr16:39417310-39417102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
118, 35
               

               
Conread position:
               
4-216
               

               
Cow position:
               
chr16:29066975-29067180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
4-225
               

               
Cow position:
               
chr16:40305738-40305959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 112
               

               
Conread position:
               
4-258
               

               
Cow position:
               
chr16:39237750-39238007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
98, 167
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr16:11422118-11422365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr16:7917607-7917876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 144
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr16:12907011-12906757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr16:23871844-23871583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr16:24213212-24212945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
81, 176
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr16:28467784-28467521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 129
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr16:33739338-33739072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr16:37236831-37236567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 43
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr16:47643226-47643481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
118, 32
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr16:52636575-52636317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 44
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr16:53932164-53931908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
81, 120
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr16:30715299-30715572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
113, 99
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr16:8279982-8279723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
170, 57
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr16:20025251-20025510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
118, 16
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr16:36203808-36203549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
4-267
               

               
Cow position:
               
chr16:32587006-32587274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 22
               

               
Conread position:
               
4-267
               

               
Cow position:
               
chr16:42970124-42969856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 40
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr16:25936415-25936684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
4-273
               

               
Cow position:
               
chr16:37075016-37075285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
81, 36
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr16:12060220-12060502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
108, 157
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr16:20634071-20633790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
118, 37
               

               
Conread position:
               
4-284
               

               
Cow position:
               
chr16:5845477-5845757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
4-296
               

               
Cow position:
               
chr16:7077936-7077646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
4-303
               

               
Cow position:
               
chr16:43275829-43276120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
118, 35
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chr16:16402520-16402212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
100, 166
               

               
Conread position:
               
4-323
               

               
Cow position:
               
chr16:13611643-13611331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
118, 44
               

               
Conread position:
               
4-328
               

               
Cow position:
               
chr16:5363699-5364032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 297
               

               
Conread position:
               
4-328
               

               
Cow position:
               
chr16:14758537-14758862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr16:49169576-49169238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
102, 29
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr16:23483095-23483426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
84, 63
               

               
Conread position:
               
4-338
               

               
Cow position:
               
chr16:10040031-10039700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 48
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr16:14568678-14568337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
118, 91
               

               
Conread position:
               
4-354
               

               
Cow position:
               
chr16:13989790-13990126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
118, 48
               

               
Conread position:
               
4-354
               

               
Cow position:
               
chr16:41697284-41696940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
83, 66
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr16:11615421-11615081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
163, 27
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr16:14106454-14106806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
118, 18
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr16:33704607-33704964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 194
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr16:42242312-42241961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr16:54664996-54664642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
100, 92
               

               
Conread position:
               
4-358
               

               
Cow position:
               
chr16:9985583-9985231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 99
               

               
Conread position:
               
4-400
               

               
Cow position:
               
chr16:9932967-9933370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
4-402
               

               
Cow position:
               
chr16:13689471-13689875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 51
               

               
Conread position:
               
4-405
               

               
Cow position:
               
chr16:55784955-55784531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr16:45554245-45554647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
68, 27
               

               
Conread position:
               
4-409
               

               
Cow position:
               
chr16:45139476-45139878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 5
               

               
Conread position:
               
4-412
               

               
Cow position:
               
chr16:600752-601167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
80, 157
               

               
Conread position:
               
4-412
               

               
Cow position:
               
chr16:6344632-6344240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
102, 82
               

               
Conread position:
               
4-412
               

               
Cow position:
               
chr16:19643700-19644108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
140, 39
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr16:2223600-2223166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
79, 318
               

               
Conread position:
               
4-421
               

               
Cow position:
               
chr16:49336034-49336451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
86, 57
               

               
Conread position:
               
4-433
               

               
Cow position:
               
chr16:14754515-14754089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
118, 37
               

               
Conread position:
               
5-100
               

               
Cow position:
               
chr16:52802448-52802543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
96
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-188
               

               
Cow position:
               
chr16:31074203-31074386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 49
               

               
Conread position:
               
5-210
               

               
Cow position:
               
chr16:47620188-47620392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
99, 50
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr16:35168533-35168744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr16:50688329-50688535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
122, 60
               

               
Conread position:
               
5-213
               

               
Cow position:
               
chr16:4144872-4145082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
86, 36
               

               
Conread position:
               
5-247
               

               
Cow position:
               
chr16:28191875-28192120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
125, 48
               

               
Conread position:
               
5-265
               

               
Cow position:
               
chr16:12361164-12360905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
98, 26
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr16:52889602-52889342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
99, 32
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr16:594421-594154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr16:43505990-43505725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr16:46628028-46627734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
121, 26
               

               
Conread position:
               
5-327
               

               
Cow position:
               
chr16:29608326-29608643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
111, 54
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr16:3821341-3821663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 157
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr16:20205260-20205626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
78, 143
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr16:27701433-27701101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
263, 55
               

               
Conread position:
               
5-382
               

               
Cow position:
               
chr16:14124964-14125310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
158, 30
               

               
Conread position:
               
5-420
               

               
Cow position:
               
chr16:37116882-37117304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
6-230
               

               
Cow position:
               
chr16:37065423-37065200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 44
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr16:54083843-54084103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
80, 33
               

               
Conread position:
               
6-273
               

               
Cow position:
               
chr16:4626586-4626315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 128
               

               
Conread position:
               
6-273
               

               
Cow position:
               
chr16:47343282-47343551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 18
               

               
Conread position:
               
6-327
               

               
Cow position:
               
chr16:8812279-8811968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
39, 175
               

               
Conread position:
               
6-356
               

               
Cow position:
               
chr16:29557822-29557462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
116, 162
               

               
Conread position:
               
6-380
               

               
Cow position:
               
chr16:42443961-42444347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
116, 169
               

               
Conread position:
               
6-381
               

               
Cow position:
               
chr16:4910722-4910334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
6-400
               

               
Cow position:
               
chr16:53509181-53508782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
77, 167
               

               
Conread position:
               
6-414
               

               
Cow position:
               
chr16:16236319-16235910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 40
               

               
Conread position:
               
7-212
               

               
Cow position:
               
chr16:33229883-33230091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 52
               

               
Conread position:
               
7-220
               

               
Cow position:
               
chr16:47336540-47336758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 32
               

               
Conread position:
               
7-333
               

               
Cow position:
               
chr16:16265293-16264966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 175
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr16:25839425-25839773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 288
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr16:54578977-54579327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 46
               

               
Conread position:
               
7-412
               

               
Cow position:
               
chr16:6344102-6343687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
78, 40
               

               
Conread position:
               
7-440
               

               
Cow position:
               
chr16:52835071-52834652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
17, 43
               

               
Conread position:
               
8-207
               

               
Cow position:
               
chr16:56912910-56912704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 160
               

               
Conread position:
               
8-213
               

               
Cow position:
               
chr16:56097004-56096797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 39
               

               
Conread position:
               
8-264
               

               
Cow position:
               
chr16:13707456-13707711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
8-272
               

               
Cow position:
               
chr16:8076697-8076427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
8-283
               

               
Cow position:
               
chr16:17982335-17982057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
76, 228
               

               
Conread position:
               
8-338
               

               
Cow position:
               
chr16:11806483-11806813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 114
               

               
Conread position:
               
8-356
               

               
Cow position:
               
chr16:33299200-33299559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
76, 167
               

               
Conread position:
               
9-187
               

               
Cow position:
               
chr16:53037812-53037635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 31
               

               
Conread position:
               
11-291
               

               
Cow position:
               
chr16:53048365-53048644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
73, 95
               

               
Conread position:
               
12-212
               

               
Cow position:
               
chr16:21369295-21369503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 34
               

               
Conread position:
               
13-327
               

               
Cow position:
               
chr16:17282483-17282790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
119, 28
               

               
Conread position:
               
14-262
               

               
Cow position:
               
chr16:38119632-38119386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
43, 136
               

               
Conread position:
               
14-267
               

               
Cow position:
               
chr16:3587198-3587448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 40
               

               
Conread position:
               
14-267
               

               
Cow position:
               
chr16:6887633-6887380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
14-293
               

               
Cow position:
               
chr16:17288758-17289043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
95, 25
               

               
Conread position:
               
14-328
               

               
Cow position:
               
chr16:28922601-28922908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
69, 40
               

               
Conread position:
               
14-348
               

               
Cow position:
               
chr16:56082543-56082208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
14-356
               

               
Cow position:
               
chr16:51500753-51501090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
106, 26
               

               
Conread position:
               
14-398
               

               
Cow position:
               
chr16:8193265-8193660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
55, 25
               

               
Conread position:
               
15-208
               

               
Cow position:
               
chr16:3918346-3918546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
15-240
               

               
Cow position:
               
chr16:45692959-45693192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 182
               

               
Conread position:
               
15-404
               

               
Cow position:
               
chr16:23681190-23681575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
132, 28
               

               
Conread position:
               
16-182
               

               
Cow position:
               
chr16:25803586-25803415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
34, 83
               

               
Conread position:
               
16-414
               

               
Cow position:
               
chr16:8026029-8025648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
105, 8
               

               
Conread position:
               
17-264
               

               
Cow position:
               
chr16:28833659-28833910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 22
               

               
Conread position:
               
17-322
               

               
Cow position:
               
chr16:17945338-17945652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 11
               

               
Conread position:
               
18-362
               

               
Cow position:
               
chr16:8323165-8322823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
93, 149
               

               
Conread position:
               
18-437
               

               
Cow position:
               
chr16:34153759-34153327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 211
               

               
Conread position:
               
19-266
               

               
Cow position:
               
chr16:5836404-5836654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
149, 24
               

               
Conread position:
               
20-354
               

               
Cow position:
               
chr16:47964998-47964661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 139
               

               
Conread position:
               
21-263
               

               
Cow position:
               
chr16:52068280-52068035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
63, 108
               

               
Conread position:
               
21-267
               

               
Cow position:
               
chr16:56590331-56590575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 38
               

               
Conread position:
               
21-356
               

               
Cow position:
               
chr16:7442282-7441938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
63, 189
               

               
Conread position:
               
22-323
               

               
Cow position:
               
chr16:11103003-11102699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
68, 161
               

               
Conread position:
               
24-295
               

               
Cow position:
               
chr16:50873341-50873071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 144
               

               
Conread position:
               
25-312
               

               
Cow position:
               
chr16:33791005-33790719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
107, 61
               

               
Conread position:
               
26-210
               

               
Cow position:
               
chr16:11568289-11568105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
26-327
               

               
Cow position:
               
chr16:39616567-39616856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 65
               

               
Conread position:
               
26-366
               

               
Cow position:
               
chr16:31348942-31348584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
96, 232
               

               
Conread position:
               
26-412
               

               
Cow position:
               
chr16:46433499-46433105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
5, 15
               

               
Conread position:
               
27-259
               

               
Cow position:
               
chr16:1725258-1725012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 36
               

               
Conread position:
               
27-266
               

               
Cow position:
               
chr16:45645858-45645619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
27-381
               

               
Cow position:
               
chr16:14242197-14242556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
10, 150
               

               
Conread position:
               
29-267
               

               
Cow position:
               
chr16:4902417-4902658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
87, 61
               

               
Conread position:
               
29-283
               

               
Cow position:
               
chr16:52133687-52133431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
54, 135
               

               
Conread position:
               
29-283
               

               
Cow position:
               
chr16:53086502-53086255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
29-284
               

               
Cow position:
               
chr16:5725297-5725554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
29-310
               

               
Cow position:
               
chr16:53627600-53627318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 139
               

               
Conread position:
               
29-327
               

               
Cow position:
               
chr16:3303862-3304159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
205, 8
               

               
Conread position:
               
29-335
               

               
Cow position:
               
chr16:5636415-5636716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
10, 211
               

               
Conread position:
               
29-356
               

               
Cow position:
               
chr16:10592263-10592605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
82, 132
               

               
Conread position:
               
29-356
               

               
Cow position:
               
chr16:27659905-27659599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
140, 34
               

               
Conread position:
               
29-358
               

               
Cow position:
               
chr16:7418212-7418540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
78, 142
               

               
Conread position:
               
29-411
               

               
Cow position:
               
chr16:34257212-34256817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
29-412
               

               
Cow position:
               
chr16:23472574-23472962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
6, 263
               

               
Conread position:
               
29-420
               

               
Cow position:
               
chr16:18205794-18206184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 12
               

               
Conread position:
               
30-261
               

               
Cow position:
               
chr16:22124124-22123906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
30-328
               

               
Cow position:
               
chr16:7549797-7550101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
91, 147
               

               
Conread position:
               
31-264
               

               
Cow position:
               
chr16:50521308-50521544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 136
               

               
Conread position:
               
31-294
               

               
Cow position:
               
chr16:20069658-20069929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
31-419
               

               
Cow position:
               
chr16:44744308-44743901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
44, 152
               

               
Conread position:
               
32-207
               

               
Cow position:
               
chr16:9136007-9136191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
32-261
               

               
Cow position:
               
chr16:38191303-38191537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 142
               

               
Conread position:
               
33-267
               

               
Cow position:
               
chr16:18036783-18037019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
33-294
               

               
Cow position:
               
chr16:7075745-7076009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 23
               

               
Conread position:
               
34-261
               

               
Cow position:
               
chr16:10651057-10650824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
34-267
               

               
Cow position:
               
chr16:31268974-31269210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
50, 72
               

               
Conread position:
               
35-265
               

               
Cow position:
               
chr16:3633946-3634184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
35-283
               

               
Cow position:
               
chr16:23738013-23738267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 106
               

               
Conread position:
               
35-310
               

               
Cow position:
               
chr16:42345769-42345503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
39-280
               

               
Cow position:
               
chr16:18402526-18402770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
39-366
               

               
Cow position:
               
chr16:25386819-25387147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 73
               

               
Conread position:
               
39-411
               

               
Cow position:
               
chr16:42734175-42733802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 43
               

               
Conread position:
               
40-410
               

               
Cow position:
               
chr16:10148116-10148485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 145
               

               
Conread position:
               
41-215
               

               
Cow position:
               
chr16:23033698-23033869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
41-244
               

               
Cow position:
               
chr16:50532903-50533101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 64
               

               
Conread position:
               
41-293
               

               
Cow position:
               
chr16:37669896-37669641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 126
               

               
Conread position:
               
41-399
               

               
Cow position:
               
chr16:22380515-22380152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 128
               

               
Conread position:
               
41-404
               

               
Cow position:
               
chr16:48398412-48398048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 73
               

               
Conread position:
               
42-417
               

               
Cow position:
               
chr16:38243821-38243438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 126
               

               
Conread position:
               
43-261
               

               
Cow position:
               
chr16:3246364-3246141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 135
               

               
Conread position:
               
43-338
               

               
Cow position:
               
chr16:8240023-8239719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
62, 95
               

               
Conread position:
               
43-356
               

               
Cow position:
               
chr16:51246790-51247107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
41, 124
               

               
Conread position:
               
43-361
               

               
Cow position:
               
chr16:33226696-33226371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 207
               

               
Conread position:
               
44-283
               

               
Cow position:
               
chr16:48340852-48340608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
78, 42
               

               
Conread position:
               
44-356
               

               
Cow position:
               
chr16:33198591-33198268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
138, 173
               

               
Conread position:
               
44-420
               

               
Cow position:
               
chr16:12320065-12320451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 91
               

               
Conread position:
               
45-253
               

               
Cow position:
               
chr16:7504932-7505145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
45-307
               

               
Cow position:
               
chr16:22919330-22919574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
116, 13
               

               
Conread position:
               
46-356
               

               
Cow position:
               
chr16:10504681-10504979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
46-356
               

               
Cow position:
               
chr16:32970233-32969920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 178
               

               
Conread position:
               
46-361
               

               
Cow position:
               
chr16:50288994-50289318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
63-356
               

               
Cow position:
               
chr16:9904955-9905258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
59, 23
               

               
Conread position:
               
63-356
               

               
Cow position:
               
chr16:41578088-41578388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
70-268
               

               
Cow position:
               
chr16:45753581-45753386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
87, 51
               

               
Conread position:
               
71-412
               

               
Cow position:
               
chr16:8737935-8738288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
51, 90
               

               
Conread position:
               
72-410
               

               
Cow position:
               
chr16:23955955-23955611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 39
               

               
Conread position:
               
82-327
               

               
Cow position:
               
chr16:34754079-34753832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
83-366
               

               
Cow position:
               
chr16:22206958-22207235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
87, 177
               

               
Conread position:
               
86-271
               

               
Cow position:
               
chr16:17903764-17903571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
92-409
               

               
Cow position:
               
chr16:19052527-19052847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
109-356
               

               
Cow position:
               
chr16:2417676-2417424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 9
               

               
Conread position:
               
110-254
               

               
Cow position:
               
chr16:35477503-35477358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 66
               

               
Conread position:
               
114-354
               

               
Cow position:
               
chr16:40514563-40514333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
114-356
               

               
Cow position:
               
chr16:16570832-16571062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
44, 62
               

               
Conread position:
               
127-417
               

               
Cow position:
               
chr16:29527754-29528063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 233
               

               
Conread position:
               
130-411
               

               
Cow position:
               
chr16:45294476-45294764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
40, 164
               

               
Conread position:
               
133-354
               

               
Cow position:
               
chr16:11135046-11134825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
35, 44
               

               
Conread position:
               
133-402
               

               
Cow position:
               
chr16:20824420-20824689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
134-417
               

               
Cow position:
               
chr16:11584460-11584184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
174, 34
               

               
Conread position:
               
168-328
               

               
Cow position:
               
chr16:17460139-17460298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
168-356
               

               
Cow position:
               
chr16:15945286-15945090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               
Show alignments to all cow chromosomes.