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Cow genome map

           
Conread name:
           
Ss1.1-rthg23_l8.5
        

               
Conread position:
               
1-101
               

               
Cow position:
               
chr6:22986147-22986049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
101
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-107
               

               
Cow position:
               
chr6:1002389-1002287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
1-115
               

               
Cow position:
               
chr6:3719162-3719050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1-120
               

               
Cow position:
               
chr6:20605777-20605895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-123
               

               
Cow position:
               
chr6:89064-88943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
1-156
               

               
Cow position:
               
chr6:39994617-39994462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
110, 114
               

               
Conread position:
               
1-158
               

               
Cow position:
               
chr6:53139085-53138920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr6:14201542-14201703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 105
               

               
Conread position:
               
1-160
               

               
Cow position:
               
chr6:32210783-32210625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 21
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr6:2607457-2607621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
122, 43
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr6:7103392-7103224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 161
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr6:10332252-10332084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
85, 70
               

               
Conread position:
               
1-166
               

               
Cow position:
               
chr6:57680591-57680421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
38, 105
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr6:44377109-44377285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr6:59620513-59620691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
1-182
               

               
Cow position:
               
chr6:15923155-15922976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
110, 46
               

               
Conread position:
               
1-185
               

               
Cow position:
               
chr6:46161680-46161495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 102
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr6:6614277-6614467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
33, 161
               

               
Conread position:
               
1-193
               

               
Cow position:
               
chr6:8187675-8187485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 67
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr6:54885069-54884867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr6:24515349-24515157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
180, 38
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr6:30826192-30825989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr6:58364168-58363965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 43
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr6:642733-642520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 156
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr6:48344172-48344379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
112, 187
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr6:607106-607313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
83, 104
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr6:52025810-52025598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr6:633517-633304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
84, 184
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr6:16737864-16738072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr6:5445467-5445677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr6:44984170-44984384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 45
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr6:47540370-47540585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
30, 156
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr6:53731365-53731578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 38
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr6:61137215-61137429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
103, 85
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr6:62925149-62924944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
121, 38
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr6:14696528-14696316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr6:5958179-5957970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr6:57274313-57274525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
1-216
               

               
Cow position:
               
chr6:67304645-67304863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 116
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr6:68049279-68049507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
82, 41
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr6:21542164-21542400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
119, 44
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr6:63011324-63011080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
84, 28
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr6:20329865-20330105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
157, 112
               

               
Conread position:
               
1-256
               

               
Cow position:
               
chr6:67968770-67968512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr6:59108786-59109044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr6:18105498-18105746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr6:24934786-24934523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
84, 154
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr6:52248291-52248025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
121, 173
               

               
Conread position:
               
1-263
               

               
Cow position:
               
chr6:52431188-52430917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 132
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr6:130321-130057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 218
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr6:561462-561733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 185
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr6:12668951-12669201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr6:42565529-42565794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
80, 60
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr6:52562330-52562074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
63, 123
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr6:53178481-53178735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr6:54701384-54701647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr6:55610395-55610130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
69, 42
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr6:55763698-55763959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
83, 28
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr6:899446-899185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
121, 44
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr6:17090439-17090707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
110, 169
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr6:25008558-25008827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
122, 35
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr6:25407548-25407283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
89, 40
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr6:30973885-30974150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
55, 101
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr6:35993421-35993692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
84, 169
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr6:37149037-37149297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
89, 38
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr6:67950803-67951057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
103, 37
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr6:78068-77807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 60
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr6:1770355-1770089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
83, 103
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr6:1886819-1886558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
83, 24
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr6:17334213-17333944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr6:35471679-35471401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
103, 258
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr6:37246586-37246333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 105
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr6:52412698-52412968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
83, 186
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr6:67214585-67214871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr6:35539663-35539386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
84, 54
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr6:8788193-8787912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 54
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr6:23248119-23247841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
164, 110
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr6:26728683-26728407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
54, 19
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr6:35613570-35613292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
162, 44
               

               
Conread position:
               
1-283
               

               
Cow position:
               
chr6:38641342-38641617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
121, 38
               

               
Conread position:
               
1-284
               

               
Cow position:
               
chr6:55040373-55040088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
6, 123
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr6:10695711-10695988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
114, 102
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr6:12543089-12542800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
103, 38
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr6:47640593-47640300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 103
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr6:61113594-61113898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 217
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr6:16423543-16423836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
121, 58
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr6:28977185-28976905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
164, 38
               

               
Conread position:
               
1-314
               

               
Cow position:
               
chr6:12092140-12091844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 28
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr6:47574749-47575071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 40
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr6:60819359-60819681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr6:6343270-6343596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
82, 31
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr6:6400792-6401123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 69
               

               
Conread position:
               
1-327
               

               
Cow position:
               
chr6:14958505-14958173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
121, 304
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr6:7989572-7989250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
83, 124
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr6:51463772-51463466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr6:54430663-54431021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
83, 274
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr6:60739859-60740204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
84, 40
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr6:28482859-28483216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
88, 172
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr6:120083-120441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
122, 85
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr6:5609596-5609241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
294, 37
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr6:8965933-8966289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 91
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr6:16700103-16700455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
82, 30
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr6:19401706-19402046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
88, 33
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr6:24031219-24031564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
158, 129
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr6:39358497-39358142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr6:44078365-44078716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
99, 40
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr6:44194701-44194352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 32
               

               
Conread position:
               
1-356
               

               
Cow position:
               
chr6:66433791-66434155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
1-360
               

               
Cow position:
               
chr6:54867354-54867722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
22, 56
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr6:14949637-14949281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr6:23695841-23696211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
121, 42
               

               
Conread position:
               
1-367
               

               
Cow position:
               
chr6:50984068-50984438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
82, 53
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr6:11246608-11246995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
103, 21
               

               
Conread position:
               
1-381
               

               
Cow position:
               
chr6:32125911-32126279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
121, 56
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr6:323465-323052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
54, 155
               

               
Conread position:
               
1-404
               

               
Cow position:
               
chr6:26450161-26450553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
114, 102
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr6:51893661-51893263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
84, 167
               

               
Conread position:
               
1-409
               

               
Cow position:
               
chr6:8125176-8125584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr6:27888192-27888600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
1-414
               

               
Cow position:
               
chr6:61631769-61631345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
83, 167
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr6:1703658-1704058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
180, 107
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr6:10176459-10176035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
61, 53
               

               
Conread position:
               
1-415
               

               
Cow position:
               
chr6:44566256-44566687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
84, 161
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr6:7539418-7539836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
1-416
               

               
Cow position:
               
chr6:21231380-21231773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
181, 42
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr6:9008767-9008362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
121, 40
               

               
Conread position:
               
1-418
               

               
Cow position:
               
chr6:64431783-64432197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
118, 38
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr6:60783714-60784141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr6:60859462-60859024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
83, 160
               

               
Conread position:
               
2-93
               

               
Cow position:
               
chr6:26837544-26837453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
92
               

               
Alignm identity:
               
78
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-142
               

               
Cow position:
               
chr6:18904497-18904356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
104, 57
               

               
Conread position:
               
2-168
               

               
Cow position:
               
chr6:12623313-12623474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
2-183
               

               
Cow position:
               
chr6:53542474-53542292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
2-192
               

               
Cow position:
               
chr6:42961522-42961323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr6:13619626-13619420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 154
               

               
Conread position:
               
2-205
               

               
Cow position:
               
chr6:65839029-65838823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 166
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr6:6966904-6966690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr6:13531659-13531873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr6:31192481-31192267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr6:33863601-33863821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr6:37217613-37217827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr6:38917044-38916830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr6:40710370-40710584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr6:45694856-45695070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-213
               

               
Cow position:
               
chr6:63715071-63715285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 167
               

               
Conread position:
               
2-220
               

               
Cow position:
               
chr6:6460384-6460604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
120, 165
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr6:26720060-26719835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-224
               

               
Cow position:
               
chr6:43050003-43050229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 123
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr6:2898757-2898984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr6:14198639-14198866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
83, 167
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr6:14886832-14886605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr6:18502819-18502592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 167
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr6:25095869-25096096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr6:25347925-25347698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr6:25376254-25376481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 167
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr6:32298623-32298397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 41
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr6:41033908-41034134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
109, 154
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr6:46866652-46866425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 99
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr6:48290787-48291014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr6:52462871-52463098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr6:56888398-56888625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-226
               

               
Cow position:
               
chr6:59052413-59052640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 167
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr6:28184326-28184096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 168
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr6:43999164-43998934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr6:66514419-66514189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 174
               

               
Conread position:
               
2-229
               

               
Cow position:
               
chr6:66519376-66519146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 174
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr6:28159894-28159664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 20
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr6:36299333-36299102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr6:67554226-67554457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
83, 122
               

               
Conread position:
               
2-230
               

               
Cow position:
               
chr6:68339954-68339724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
2-234
               

               
Cow position:
               
chr6:2453954-2454190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
83, 128
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr6:59835073-59835310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
83, 167
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr6:1944571-1944809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
158, 39
               

               
Conread position:
               
2-264
               

               
Cow position:
               
chr6:66199631-66199888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 94
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr6:56843004-56843262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
120, 38
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr6:58590119-58590381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
96, 107
               

               
Conread position:
               
2-266
               

               
Cow position:
               
chr6:61608352-61608620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 171
               

               
Conread position:
               
2-275
               

               
Cow position:
               
chr6:59069783-59069507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr6:63272769-63272485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
81, 176
               

               
Conread position:
               
2-283
               

               
Cow position:
               
chr6:12551112-12551394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 6
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr6:20098119-20097824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 29
               

               
Conread position:
               
2-293
               

               
Cow position:
               
chr6:46570963-46571240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr6:54991157-54990855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 41
               

               
Conread position:
               
2-310
               

               
Cow position:
               
chr6:9452928-9452620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 279
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr6:8209744-8209438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
2-338
               

               
Cow position:
               
chr6:48112049-48112379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
104, 34
               

               
Conread position:
               
2-350
               

               
Cow position:
               
chr6:51581412-51581060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 135
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr6:2547085-2547454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr6:13687966-13687617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr6:26915175-26915527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 40
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr6:29484935-29485282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
235, 38
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr6:46860323-46859971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 117
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr6:54132663-54133010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 20
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr6:8637120-8637478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
76, 35
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr6:10106151-10105779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 342
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr6:19264655-19264297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 39
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr6:38853813-38853455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 160
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr6:45690748-45690414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr6:49398771-49398428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
111, 29
               

               
Conread position:
               
2-356
               

               
Cow position:
               
chr6:63720044-63720393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
2-401
               

               
Cow position:
               
chr6:12337829-12338240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
82, 28
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr6:36196059-36196454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 33
               

               
Conread position:
               
2-403
               

               
Cow position:
               
chr6:46465673-46466066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
2-404
               

               
Cow position:
               
chr6:15243096-15243515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 166
               

               
Conread position:
               
2-408
               

               
Cow position:
               
chr6:32121756-32122152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 29
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr6:21456845-21456421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
119, 57
               

               
Conread position:
               
2-412
               

               
Cow position:
               
chr6:47519891-47520315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr6:31535726-31535308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 117
               

               
Conread position:
               
2-415
               

               
Cow position:
               
chr6:36202673-36203085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 24
               

               
Conread position:
               
2-418
               

               
Cow position:
               
chr6:17414606-17414186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 18
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr6:2012865-2013022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
108, 44
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr6:13040299-13040547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
3-266
               

               
Cow position:
               
chr6:58073891-58074156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
103, 19
               

               
Conread position:
               
4-120
               

               
Cow position:
               
chr6:59301978-59301861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
4-153
               

               
Cow position:
               
chr6:10605532-10605684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 114
               

               
Conread position:
               
4-175
               

               
Cow position:
               
chr6:50454827-50455005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
4-180
               

               
Cow position:
               
chr6:1538642-1538822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 125
               

               
Conread position:
               
4-181
               

               
Cow position:
               
chr6:57535856-57535675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 174
               

               
Conread position:
               
4-186
               

               
Cow position:
               
chr6:6098435-6098250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
108, 41
               

               
Conread position:
               
4-199
               

               
Cow position:
               
chr6:16411042-16411232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr6:45160445-45160252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr6:10254086-10254292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 53
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr6:37199692-37199473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr6:49685432-49685640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
118, 35
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr6:58173030-58173240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
93, 24
               

               
Conread position:
               
4-214
               

               
Cow position:
               
chr6:40834626-40834412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
118, 163
               

               
Conread position:
               
4-227
               

               
Cow position:
               
chr6:47989032-47989241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr6:60239545-60239314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr6:3719831-3720071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 156
               

               
Conread position:
               
4-240
               

               
Cow position:
               
chr6:62851433-62851194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 125
               

               
Conread position:
               
4-245
               

               
Cow position:
               
chr6:18961676-18961430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
17, 166
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr6:24961992-24962236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 99
               

               
Conread position:
               
4-261
               

               
Cow position:
               
chr6:15310379-15310636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
4-263
               

               
Cow position:
               
chr6:20157172-20157438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
71, 179
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr6:22503076-22502805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
60, 166
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr6:32420982-32421253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 165
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr6:47383848-47384112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 126
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr6:63286663-63286399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 151
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr6:31525895-31526154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
116, 69
               

               
Conread position:
               
4-267
               

               
Cow position:
               
chr6:445158-445432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
80, 250
               

               
Conread position:
               
4-267
               

               
Cow position:
               
chr6:65702554-65702304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 16
               

               
Conread position:
               
4-276
               

               
Cow position:
               
chr6:528430-528166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
179, 82
               

               
Conread position:
               
4-283
               

               
Cow position:
               
chr6:36652266-36652547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
118, 35
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr6:37634636-37634931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
117, 32
               

               
Conread position:
               
4-316
               

               
Cow position:
               
chr6:53651888-53652202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
111, 41
               

               
Conread position:
               
4-316
               

               
Cow position:
               
chr6:60057809-60057497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr6:1499485-1499819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
4-328
               

               
Cow position:
               
chr6:37467692-37467366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr6:10400048-10399716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
80, 32
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr6:40713655-40713317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
79, 49
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr6:7128553-7128203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
107, 27
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr6:50090488-50090846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
80, 110
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr6:57546369-57546025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 25
               

               
Conread position:
               
4-356
               

               
Cow position:
               
chr6:65870871-65871232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 165
               

               
Conread position:
               
4-360
               

               
Cow position:
               
chr6:31847373-31847039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 37
               

               
Conread position:
               
4-371
               

               
Cow position:
               
chr6:67323163-67323519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
4-403
               

               
Cow position:
               
chr6:53460725-53460323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 22
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr6:15300970-15300586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
80, 16
               

               
Conread position:
               
4-411
               

               
Cow position:
               
chr6:47305186-47305597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
4-418
               

               
Cow position:
               
chr6:5095703-5095277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
83, 33
               

               
Conread position:
               
4-420
               

               
Cow position:
               
chr6:8562563-8562983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
118, 174
               

               
Conread position:
               
4-421
               

               
Cow position:
               
chr6:19755230-19754809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
101, 80
               

               
Conread position:
               
4-434
               

               
Cow position:
               
chr6:52478580-52478134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 185
               

               
Conread position:
               
4-437
               

               
Cow position:
               
chr6:48281842-48282279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
19, 36
               

               
Conread position:
               
5-163
               

               
Cow position:
               
chr6:19329906-19329749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
5-176
               

               
Cow position:
               
chr6:6264493-6264662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
117, 26
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr6:47625119-47624908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
94, 144
               

               
Conread position:
               
5-260
               

               
Cow position:
               
chr6:63094081-63093813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
80, 42
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr6:4692136-4691869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
79, 246
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr6:27605495-27605240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
80, 56
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr6:34475706-34475455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 52
               

               
Conread position:
               
5-264
               

               
Cow position:
               
chr6:60442266-60442515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr6:582428-582165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr6:24781716-24781451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
26, 162
               

               
Conread position:
               
5-266
               

               
Cow position:
               
chr6:38218520-38218774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
121, 34
               

               
Conread position:
               
5-267
               

               
Cow position:
               
chr6:50746828-50747106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
79, 257
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr6:17997467-17997195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
5-327
               

               
Cow position:
               
chr6:21869797-21869482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
5-381
               

               
Cow position:
               
chr6:38207648-38207259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 146
               

               
Conread position:
               
5-400
               

               
Cow position:
               
chr6:18447661-18447267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 33
               

               
Conread position:
               
5-401
               

               
Cow position:
               
chr6:53024946-53024566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
160, 41
               

               
Conread position:
               
5-406
               

               
Cow position:
               
chr6:15447360-15446942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
62, 322
               

               
Conread position:
               
5-408
               

               
Cow position:
               
chr6:24468549-24468146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 158
               

               
Conread position:
               
5-411
               

               
Cow position:
               
chr6:3464132-3464550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 234
               

               
Conread position:
               
5-421
               

               
Cow position:
               
chr6:53933000-53932577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
79, 49
               

               
Conread position:
               
6-188
               

               
Cow position:
               
chr6:7994621-7994438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
6-207
               

               
Cow position:
               
chr6:60456680-60456878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
164, 49
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr6:48010676-48010421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 129
               

               
Conread position:
               
6-264
               

               
Cow position:
               
chr6:54980951-54981215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 158
               

               
Conread position:
               
6-290
               

               
Cow position:
               
chr6:60350450-60350160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 175
               

               
Conread position:
               
6-356
               

               
Cow position:
               
chr6:5114198-5113846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
98, 33
               

               
Conread position:
               
6-412
               

               
Cow position:
               
chr6:54369051-54368650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
6-413
               

               
Cow position:
               
chr6:32867357-32866963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
116, 33
               

               
Conread position:
               
7-177
               

               
Cow position:
               
chr6:7824610-7824784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
115, 101
               

               
Conread position:
               
7-207
               

               
Cow position:
               
chr6:415944-416155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
7-212
               

               
Cow position:
               
chr6:24583384-24583167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 194
               

               
Conread position:
               
7-381
               

               
Cow position:
               
chr6:15242682-15243066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
97, 108
               

               
Conread position:
               
7-421
               

               
Cow position:
               
chr6:15938003-15937582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
32, 49
               

               
Conread position:
               
8-177
               

               
Cow position:
               
chr6:33276888-33277064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
8-207
               

               
Cow position:
               
chr6:9219124-9219321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
8-353
               

               
Cow position:
               
chr6:6965534-6965196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
16, 12
               

               
Conread position:
               
9-197
               

               
Cow position:
               
chr6:55508728-55508535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
76, 121
               

               
Conread position:
               
9-266
               

               
Cow position:
               
chr6:46283146-46282896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
157, 34
               

               
Conread position:
               
9-349
               

               
Cow position:
               
chr6:54036283-54035946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
106, 30
               

               
Conread position:
               
10-266
               

               
Cow position:
               
chr6:19681674-19681417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
75, 69
               

               
Conread position:
               
11-185
               

               
Cow position:
               
chr6:8206190-8206368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
74, 167
               

               
Conread position:
               
11-198
               

               
Cow position:
               
chr6:602947-603136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
96, 28
               

               
Conread position:
               
12-176
               

               
Cow position:
               
chr6:60931043-60930879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
94, 50
               

               
Conread position:
               
13-264
               

               
Cow position:
               
chr6:4559447-4559200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 21
               

               
Conread position:
               
14-213
               

               
Cow position:
               
chr6:44756895-44757088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
14-267
               

               
Cow position:
               
chr6:16316163-16316425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
70, 44
               

               
Conread position:
               
14-356
               

               
Cow position:
               
chr6:57571330-57571679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 167
               

               
Conread position:
               
14-412
               

               
Cow position:
               
chr6:17313587-17313996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 134
               

               
Conread position:
               
14-420
               

               
Cow position:
               
chr6:40032046-40032453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
167, 203
               

               
Conread position:
               
15-264
               

               
Cow position:
               
chr6:67618101-67617842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
70, 166
               

               
Conread position:
               
15-347
               

               
Cow position:
               
chr6:38609826-38610166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
16-267
               

               
Cow position:
               
chr6:16746195-16746452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
68, 159
               

               
Conread position:
               
16-409
               

               
Cow position:
               
chr6:67187544-67187934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
16-418
               

               
Cow position:
               
chr6:54365469-54365067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
17-214
               

               
Cow position:
               
chr6:9323018-9323205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
165, 79
               

               
Conread position:
               
19-225
               

               
Cow position:
               
chr6:19427311-19427522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 177
               

               
Conread position:
               
19-238
               

               
Cow position:
               
chr6:48803779-48803553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
19-406
               

               
Cow position:
               
chr6:28084153-28083778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
145, 72
               

               
Conread position:
               
19-406
               

               
Cow position:
               
chr6:43135082-43134688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
19-411
               

               
Cow position:
               
chr6:50577382-50577771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
105, 142
               

               
Conread position:
               
20-268
               

               
Cow position:
               
chr6:21399894-21399646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 105
               

               
Conread position:
               
21-264
               

               
Cow position:
               
chr6:28414790-28414541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 138
               

               
Conread position:
               
21-264
               

               
Cow position:
               
chr6:54936437-54936685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 141
               

               
Conread position:
               
22-381
               

               
Cow position:
               
chr6:60118011-60118369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
22-404
               

               
Cow position:
               
chr6:55282425-55282043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
94, 47
               

               
Conread position:
               
24-411
               

               
Cow position:
               
chr6:38640094-38640489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 188
               

               
Conread position:
               
25-327
               

               
Cow position:
               
chr6:21234908-21235210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
109, 157
               

               
Conread position:
               
25-362
               

               
Cow position:
               
chr6:29000058-28999751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
210, 30
               

               
Conread position:
               
26-164
               

               
Cow position:
               
chr6:24327274-24327134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
26-229
               

               
Cow position:
               
chr6:49410825-49410626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
132, 31
               

               
Conread position:
               
26-273
               

               
Cow position:
               
chr6:57164290-57164544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
5, 142
               

               
Conread position:
               
26-356
               

               
Cow position:
               
chr6:15305446-15305772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
242, 96
               

               
Conread position:
               
29-214
               

               
Cow position:
               
chr6:34031531-34031717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
80, 101
               

               
Conread position:
               
29-266
               

               
Cow position:
               
chr6:53841631-53841398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
29-267
               

               
Cow position:
               
chr6:53401232-53401465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
84, 58
               

               
Conread position:
               
29-268
               

               
Cow position:
               
chr6:12829354-12829115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
87, 27
               

               
Conread position:
               
29-283
               

               
Cow position:
               
chr6:7131008-7130755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
135, 8
               

               
Conread position:
               
29-376
               

               
Cow position:
               
chr6:35842520-35842882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 14
               

               
Conread position:
               
29-400
               

               
Cow position:
               
chr6:49421916-49421552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
8, 94
               

               
Conread position:
               
30-213
               

               
Cow position:
               
chr6:19351285-19351100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
76, 139
               

               
Conread position:
               
30-291
               

               
Cow position:
               
chr6:3081261-3080985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 197
               

               
Conread position:
               
34-284
               

               
Cow position:
               
chr6:60446133-60446386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 177
               

               
Conread position:
               
34-356
               

               
Cow position:
               
chr6:29239812-29240133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
12, 7
               

               
Conread position:
               
35-210
               

               
Cow position:
               
chr6:38233834-38234011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
87, 24
               

               
Conread position:
               
35-234
               

               
Cow position:
               
chr6:37376643-37376438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
35-356
               

               
Cow position:
               
chr6:13367167-13367483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
121, 51
               

               
Conread position:
               
38-265
               

               
Cow position:
               
chr6:66531941-66531715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
39-205
               

               
Cow position:
               
chr6:18968901-18968733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
65, 40
               

               
Conread position:
               
39-253
               

               
Cow position:
               
chr6:31635811-31635593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
83, 47
               

               
Conread position:
               
39-283
               

               
Cow position:
               
chr6:45065136-45064892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
63, 47
               

               
Conread position:
               
39-327
               

               
Cow position:
               
chr6:50975936-50976223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
143, 73
               

               
Conread position:
               
39-356
               

               
Cow position:
               
chr6:34196272-34195961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 128
               

               
Conread position:
               
39-414
               

               
Cow position:
               
chr6:35725973-35726350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
53, 125
               

               
Conread position:
               
41-211
               

               
Cow position:
               
chr6:25773503-25773332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
43, 71
               

               
Conread position:
               
41-396
               

               
Cow position:
               
chr6:4383366-4383718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
76, 62
               

               
Conread position:
               
41-401
               

               
Cow position:
               
chr6:25615222-25614841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
41-412
               

               
Cow position:
               
chr6:32287518-32287888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
81, 138
               

               
Conread position:
               
44-405
               

               
Cow position:
               
chr6:11192583-11192225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
45-266
               

               
Cow position:
               
chr6:58597620-58597398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
77, 90
               

               
Conread position:
               
49-366
               

               
Cow position:
               
chr6:61524310-61523994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
128, 12
               

               
Conread position:
               
51-409
               

               
Cow position:
               
chr6:59603317-59602959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
46, 64
               

               
Conread position:
               
52-267
               

               
Cow position:
               
chr6:54208248-54208026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
37, 26
               

               
Conread position:
               
56-293
               

               
Cow position:
               
chr6:4864653-4864412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
57-404
               

               
Cow position:
               
chr6:7119714-7119380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
95, 46
               

               
Conread position:
               
58-410
               

               
Cow position:
               
chr6:60274109-60273755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
70, 14
               

               
Conread position:
               
61-356
               

               
Cow position:
               
chr6:61269209-61269512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
10, 230
               

               
Conread position:
               
65-273
               

               
Cow position:
               
chr6:66375426-66375218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
57, 99
               

               
Conread position:
               
65-315
               

               
Cow position:
               
chr6:68376417-68376162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
28, 21
               

               
Conread position:
               
72-327
               

               
Cow position:
               
chr6:37332018-37332284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
50, 63
               

               
Conread position:
               
86-266
               

               
Cow position:
               
chr6:59770156-59770332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 21
               

               
Conread position:
               
86-356
               

               
Cow position:
               
chr6:694222-693944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
193, 87
               

               
Conread position:
               
87-346
               

               
Cow position:
               
chr6:17068723-17068461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
19, 91
               

               
Conread position:
               
92-354
               

               
Cow position:
               
chr6:67643760-67643490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 72
               

               
Conread position:
               
92-356
               

               
Cow position:
               
chr6:50504388-50504657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
93-356
               

               
Cow position:
               
chr6:18118120-18117850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 139
               

               
Conread position:
               
96-258
               

               
Cow position:
               
chr6:67615496-67615330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
26, 80
               

               
Conread position:
               
105-412
               

               
Cow position:
               
chr6:3350968-3351289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
58, 13
               

               
Conread position:
               
109-381
               

               
Cow position:
               
chr6:60144246-60143972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
62, 8
               

               
Conread position:
               
109-425
               

               
Cow position:
               
chr6:60468190-60468501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
202, 8
               

               
Conread position:
               
114-409
               

               
Cow position:
               
chr6:2078863-2078562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
64, 185
               

               
Conread position:
               
120-290
               

               
Cow position:
               
chr6:49437295-49437465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
61, 53
               

               
Conread position:
               
127-293
               

               
Cow position:
               
chr6:32853156-32853322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 29
               

               
Conread position:
               
128-265
               

               
Cow position:
               
chr6:12197148-12197287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
131-360
               

               
Cow position:
               
chr6:66570411-66570633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
40, 161
               

               
Conread position:
               
133-327
               

               
Cow position:
               
chr6:63065800-63065999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
133-417
               

               
Cow position:
               
chr6:62056588-62056873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
32, 44
               

               
Conread position:
               
134-432
               

               
Cow position:
               
chr6:30023870-30024156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
175, 22
               

               
Conread position:
               
136-266
               

               
Cow position:
               
chr6:53089986-53090117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 0
               
Show alignments to all cow chromosomes.