Cow genome map


           Conread name:
           Ss1.1-rthg26_l18.5
        

               Conread position:
               5-406
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               291
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               38, 201
               

               Conread position:
               11-388
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               40, 191
               

               Conread position:
               11-409
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 192
               

               Conread position:
               11-409
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 179
               

               Conread position:
               11-409
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 195
               

               Conread position:
               11-409
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 192
               

               Conread position:
               11-409
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 195
               

               Conread position:
               11-409
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 216
               

               Conread position:
               11-414
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 189
               

               Conread position:
               11-414
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 99
               

               Conread position:
               12-409
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 186
               

               Conread position:
               14-409
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 186
               

               Conread position:
               14-409
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 186
               

               Conread position:
               20-365
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               246
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               32, 66
               

               Conread position:
               20-395
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               272
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               105, 76
               

               Conread position:
               56-409
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 8
               

               Conread position:
               63-390
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 129
               

               Conread position:
               63-407
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 129
               

               Conread position:
               63-408
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 128
               

               Conread position:
               63-408
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 129
               

               Conread position:
               63-409
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               252
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               56, 10
               

               Conread position:
               63-409
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               262
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               56, 39
               

               Conread position:
               63-409
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 245
               

               Conread position:
               63-409
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 129
               

               Conread position:
               63-409
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 122
               

               Conread position:
               63-409
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 130
               

               Conread position:
               63-409
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 125
               

               Conread position:
               63-409
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 128
               

               Conread position:
               63-411
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 137
               

               Conread position:
               63-412
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 129
               

               Conread position:
               64-407
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 131
               

               Conread position:
               64-409
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 128
               

               Conread position:
               65-409
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 127
               

               Conread position:
               81-392
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               77, 14
               

               Conread position:
               84-400
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               41, 119
               

               Conread position:
               137-408
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               61, 27
               

               Conread position:
               195-395
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               189, 153
               

               Conread position:
               204-416
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               114, 145
               

               Conread position:
               232-409
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               113, 0
               
Show alignments to all cow chromosomes.