Cow genome map

Conread name: Ss1.1-rthg26_l18.5

Conread position: 4-322
Cow position:
Alignm length: 337
Alignm identity: 233
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 8, 97

Conread position: 11-391
Cow position:
Alignm length: 404
Alignm identity: 270
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 196

Conread position: 11-409
Cow position:
Alignm length: 421
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 186

Conread position: 11-409
Cow position:
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 184

Conread position: 11-409
Cow position:
Alignm length: 424
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 11-409
Cow position:
Alignm length: 424
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 189

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 191

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 53

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 192

Conread position: 11-409
Cow position:
Alignm length: 417
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 185

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 11-409
Cow position:
Alignm length: 419
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 190

Conread position: 11-409
Cow position:
Alignm length: 424
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 191

Conread position: 11-409
Cow position:
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 105

Conread position: 11-411
Cow position:
Alignm length: 429
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 192

Conread position: 11-411
Cow position:
Alignm length: 421
Alignm identity: 287
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 44, 188

Conread position: 11-414
Cow position:
Alignm length: 432
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 14-406
Cow position:
Alignm length: 422
Alignm identity: 297
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 29, 95

Conread position: 14-406
Cow position:
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 14-409
Cow position:
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 185

Conread position: 14-409
Cow position:
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 180

Conread position: 14-409
Cow position:
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 29

Conread position: 15-405
Cow position:
Alignm length: 415
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 188

Conread position: 15-409
Cow position:
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 184

Conread position: 19-395
Cow position:
Alignm length: 393
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 178

Conread position: 19-401
Cow position:
Alignm length: 410
Alignm identity: 285
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 33, 194

Conread position: 31-405
Cow position:
Alignm length: 395
Alignm identity: 254
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 18, 149

Conread position: 48-391
Cow position:
Alignm length: 361
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 14

Conread position: 49-405
Cow position:
Alignm length: 366
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 17

Conread position: 49-409
Cow position:
Alignm length: 375
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 15

Conread position: 49-409
Cow position:
Alignm length: 371
Alignm identity: 262
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 69, 15

Conread position: 49-409
Cow position:
Alignm length: 380
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 21

Conread position: 56-409
Cow position:
Alignm length: 372
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 8

Conread position: 58-409
Cow position:
Alignm length: 368
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 7

Conread position: 58-409
Cow position:
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 134

Conread position: 63-354
Cow position:
Alignm length: 302
Alignm identity: 203
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 66

Conread position: 63-367
Cow position:
Alignm length: 315
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 189

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 127

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 358
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 10

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 352
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 13

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 124

Conread position: 63-409
Cow position:
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 130

Conread position: 63-409
Cow position:
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 129

Conread position: 63-409
Cow position:
Alignm length: 361
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 42

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 253
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 127

Conread position: 63-409
Cow position:
Alignm length: 361
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 126

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 129

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 129

Conread position: 63-409
Cow position:
Alignm length: 366
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 105

Conread position: 63-422
Cow position:
Alignm length: 366
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 72

Conread position: 64-212
Cow position:
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 125

Conread position: 64-395
Cow position:
Alignm length: 349
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 128

Conread position: 64-409
Cow position:
Alignm length: 372
Alignm identity: 259
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 48, 137

Conread position: 64-414
Cow position:
Alignm length: 366
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 126

Conread position: 66-406
Cow position:
Alignm length: 366
Alignm identity: 241
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 127

Conread position: 81-403
Cow position:
Alignm length: 337
Alignm identity: 227
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 44, 112

Conread position: 81-409
Cow position:
Alignm length: 337
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 108

Conread position: 91-409
Cow position:
Alignm length: 336
Alignm identity: 241
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 27, 101

Conread position: 116-392
Cow position:
Alignm length: 286
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 23

Conread position: 135-409
Cow position:
Alignm length: 285
Alignm identity: 206
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 68, 19

Conread position: 136-403
Cow position:
Alignm length: 275
Alignm identity: 197
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 78, 46

Conread position: 136-409
Cow position:
Alignm length: 282
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 46

Conread position: 136-409
Cow position:
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 46

Conread position: 139-409
Cow position:
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 31

Conread position: 149-405
Cow position:
Alignm length: 258
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 33

Conread position: 168-379
Cow position:
Alignm length: 213
Alignm identity: 142
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 64, 17

Conread position: 171-380
Cow position:
Alignm length: 212
Alignm identity: 152
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 43, 14

Conread position: 175-409
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 33, 7

Conread position: 177-409
Cow position:
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 208, 33

Conread position: 184-391
Cow position:
Alignm length: 210
Alignm identity: 146
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 93, 57

Conread position: 198-392
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 39

Conread position: 204-409
Cow position:
Alignm length: 207
Alignm identity: 151
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 181, 144

Conread position: 204-409
Cow position:
Alignm length: 208
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 27, 23

Conread position: 228-393
Cow position:
Alignm length: 167
Alignm identity: 126
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 157, 76

Conread position: 258-409
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 127, 20

Conread position: 275-409
Cow position:
Alignm length: 136
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 53

Show alignments to all cow chromosomes.