Cow genome map

Conread name: Ss1.1-rthg26_l18.5

Conread position: 3-409
Cow position:
Alignm length: 426
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 184

Conread position: 3-414
Cow position:
Alignm length: 438
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 199

Conread position: 6-409
Cow position:
Alignm length: 432
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 173

Conread position: 6-409
Cow position:
Alignm length: 432
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 197

Conread position: 7-406
Cow position:
Alignm length: 423
Alignm identity: 282
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 5, 206

Conread position: 9-409
Cow position:
Alignm length: 421
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 100

Conread position: 11-212
Cow position:
Alignm length: 220
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 46, 32

Conread position: 11-230
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 85

Conread position: 11-230
Cow position:
Alignm length: 235
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 46, 182

Conread position: 11-364
Cow position:
Alignm length: 383
Alignm identity: 253
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 32, 365

Conread position: 11-367
Cow position:
Alignm length: 379
Alignm identity: 253
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 38, 71

Conread position: 11-373
Cow position:
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 189

Conread position: 11-390
Cow position:
Alignm length: 405
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 48, 189

Conread position: 11-406
Cow position:
Alignm length: 423
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 191

Conread position: 11-406
Cow position:
Alignm length: 413
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 161

Conread position: 11-409
Cow position:
Alignm length: 418
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 21

Conread position: 11-409
Cow position:
Alignm length: 436
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 201

Conread position: 11-409
Cow position:
Alignm length: 426
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 95

Conread position: 11-409
Cow position:
Alignm length: 428
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 192

Conread position: 11-409
Cow position:
Alignm length: 417
Alignm identity: 292
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 44, 173

Conread position: 11-409
Cow position:
Alignm length: 440
Alignm identity: 306
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 38, 189

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 31

Conread position: 11-409
Cow position:
Alignm length: 424
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 188

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 156

Conread position: 11-409
Cow position:
Alignm length: 421
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 186

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 67

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 126

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 11-412
Cow position:
Alignm length: 424
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 192

Conread position: 11-412
Cow position:
Alignm length: 427
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 189

Conread position: 14-233
Cow position:
Alignm length: 238
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 34, 185

Conread position: 14-286
Cow position:
Alignm length: 290
Alignm identity: 202
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 14-360
Cow position:
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 184

Conread position: 14-387
Cow position:
Alignm length: 399
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 186

Conread position: 14-409
Cow position:
Alignm length: 421
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 70

Conread position: 14-409
Cow position:
Alignm length: 421
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 186

Conread position: 14-409
Cow position:
Alignm length: 421
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 184

Conread position: 14-409
Cow position:
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 183

Conread position: 14-409
Cow position:
Alignm length: 418
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 183

Conread position: 14-409
Cow position:
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 191

Conread position: 14-409
Cow position:
Alignm length: 411
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 87

Conread position: 17-409
Cow position:
Alignm length: 406
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 47

Conread position: 17-410
Cow position:
Alignm length: 414
Alignm identity: 275
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 40, 170

Conread position: 20-395
Cow position:
Alignm length: 397
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 208

Conread position: 20-411
Cow position:
Alignm length: 413
Alignm identity: 263
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 16

Conread position: 23-334
Cow position:
Alignm length: 329
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 142

Conread position: 27-409
Cow position:
Alignm length: 407
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 173

Conread position: 37-190
Cow position:
Alignm length: 160
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 139

Conread position: 47-395
Cow position:
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 11

Conread position: 47-406
Cow position:
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 23

Conread position: 48-390
Cow position:
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 10

Conread position: 49-409
Cow position:
Alignm length: 377
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 302

Conread position: 58-409
Cow position:
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 14

Conread position: 63-246
Cow position:
Alignm length: 200
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 128

Conread position: 63-285
Cow position:
Alignm length: 239
Alignm identity: 180
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 129

Conread position: 63-331
Cow position:
Alignm length: 273
Alignm identity: 190
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 151, 130

Conread position: 63-356
Cow position:
Alignm length: 310
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-369
Cow position:
Alignm length: 326
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 110

Conread position: 63-393
Cow position:
Alignm length: 348
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 10

Conread position: 63-394
Cow position:
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 10

Conread position: 63-395
Cow position:
Alignm length: 337
Alignm identity: 229
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 40, 88

Conread position: 63-395
Cow position:
Alignm length: 342
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 127

Conread position: 63-395
Cow position:
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 79

Conread position: 63-395
Cow position:
Alignm length: 350
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 128

Conread position: 63-405
Cow position:
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-406
Cow position:
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 10

Conread position: 63-406
Cow position:
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 123

Conread position: 63-408
Cow position:
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 129

Conread position: 63-408
Cow position:
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 129

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 183

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 106

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 291

Conread position: 63-409
Cow position:
Alignm length: 374
Alignm identity: 259
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 64, 132

Conread position: 63-409
Cow position:
Alignm length: 357
Alignm identity: 254
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 46, 22

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 128

Conread position: 63-409
Cow position:
Alignm length: 367
Alignm identity: 259
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 33, 110

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 359
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 130

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 129

Conread position: 63-409
Cow position:
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 130

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 128

Conread position: 63-409
Cow position:
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 129

Conread position: 63-409
Cow position:
Alignm length: 361
Alignm identity: 259
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 56, 104

Conread position: 63-409
Cow position:
Alignm length: 360
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 127

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 128

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 254
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 356
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 127

Conread position: 64-318
Cow position:
Alignm length: 271
Alignm identity: 202
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 57, 128

Conread position: 64-407
Cow position:
Alignm length: 358
Alignm identity: 253
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 55, 108

Conread position: 64-409
Cow position:
Alignm length: 363
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 131

Conread position: 64-409
Cow position:
Alignm length: 357
Alignm identity: 246
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 62, 128

Conread position: 64-411
Cow position:
Alignm length: 361
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 116

Conread position: 65-407
Cow position:
Alignm length: 366
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 125

Conread position: 65-409
Cow position:
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 298

Conread position: 66-409
Cow position:
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 100

Conread position: 70-411
Cow position:
Alignm length: 353
Alignm identity: 244
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 48, 90

Conread position: 77-409
Cow position:
Alignm length: 350
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 118

Conread position: 82-406
Cow position:
Alignm length: 341
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 109

Conread position: 90-409
Cow position:
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 101

Conread position: 91-409
Cow position:
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 101

Conread position: 91-409
Cow position:
Alignm length: 332
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 269

Conread position: 91-422
Cow position:
Alignm length: 337
Alignm identity: 216
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 95

Conread position: 95-409
Cow position:
Alignm length: 331
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 96

Conread position: 113-409
Cow position:
Alignm length: 303
Alignm identity: 183
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 101, 69

Conread position: 132-329
Cow position:
Alignm length: 202
Alignm identity: 147
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 57, 30

Conread position: 136-409
Cow position:
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 46

Conread position: 136-409
Cow position:
Alignm length: 286
Alignm identity: 205
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 46, 214

Conread position: 136-409
Cow position:
Alignm length: 278
Alignm identity: 200
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 50, 215

Conread position: 138-395
Cow position:
Alignm length: 261
Alignm identity: 190
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 89, 32

Conread position: 138-409
Cow position:
Alignm length: 279
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 44

Conread position: 161-341
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 24

Conread position: 166-405
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 47, 19

Conread position: 166-412
Cow position:
Alignm length: 251
Alignm identity: 169
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 39, 17

Conread position: 171-412
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 213, 22

Conread position: 185-409
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 198, 42

Conread position: 194-409
Cow position:
Alignm length: 217
Alignm identity: 164
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 191, 154

Conread position: 195-412
Cow position:
Alignm length: 229
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 116, 101

Conread position: 198-380
Cow position:
Alignm length: 184
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 16

Conread position: 204-409
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 181, 144

Conread position: 206-411
Cow position:
Alignm length: 207
Alignm identity: 143
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 179, 31

Conread position: 208-409
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 142

Conread position: 210-409
Cow position:
Alignm length: 201
Alignm identity: 152
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 172, 138

Conread position: 218-409
Cow position:
Alignm length: 193
Alignm identity: 153
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 167, 91

Conread position: 228-409
Cow position:
Alignm length: 183
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 157, 24

Show alignments to all cow chromosomes.