Cow genome map

Conread name: Ss1.1-rthg26_l18.5

Conread position: 3-409
Cow position:
Alignm length: 426
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 14

Conread position: 6-409
Cow position:
Alignm length: 432
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 189

Conread position: 7-409
Cow position:
Alignm length: 430
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 196

Conread position: 7-409
Cow position:
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 194

Conread position: 7-409
Cow position:
Alignm length: 433
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 201

Conread position: 10-297
Cow position:
Alignm length: 307
Alignm identity: 220
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 37, 193

Conread position: 11-254
Cow position:
Alignm length: 268
Alignm identity: 185
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 27

Conread position: 11-309
Cow position:
Alignm length: 326
Alignm identity: 239
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 38, 179

Conread position: 11-332
Cow position:
Alignm length: 343
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 329

Conread position: 11-379
Cow position:
Alignm length: 386
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 184

Conread position: 11-394
Cow position:
Alignm length: 408
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 188

Conread position: 11-406
Cow position:
Alignm length: 447
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 203

Conread position: 11-407
Cow position:
Alignm length: 412
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 181

Conread position: 11-409
Cow position:
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 163

Conread position: 11-409
Cow position:
Alignm length: 426
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 190

Conread position: 11-409
Cow position:
Alignm length: 421
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 77

Conread position: 11-409
Cow position:
Alignm length: 426
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 191

Conread position: 11-409
Cow position:
Alignm length: 414
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 133

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 192

Conread position: 11-409
Cow position:
Alignm length: 426
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 166

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 11-409
Cow position:
Alignm length: 420
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 188

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 32

Conread position: 11-409
Cow position:
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 32

Conread position: 11-409
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 145

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 90

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 189

Conread position: 11-414
Cow position:
Alignm length: 433
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 32

Conread position: 14-409
Cow position:
Alignm length: 420
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 185

Conread position: 15-409
Cow position:
Alignm length: 412
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 63

Conread position: 17-295
Cow position:
Alignm length: 292
Alignm identity: 206
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 32, 186

Conread position: 19-409
Cow position:
Alignm length: 402
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 171

Conread position: 20-362
Cow position:
Alignm length: 366
Alignm identity: 249
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 32, 186

Conread position: 22-411
Cow position:
Alignm length: 410
Alignm identity: 273
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 61, 255

Conread position: 23-409
Cow position:
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 21

Conread position: 48-395
Cow position:
Alignm length: 362
Alignm identity: 241
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 14

Conread position: 49-392
Cow position:
Alignm length: 351
Alignm identity: 233
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 48

Conread position: 49-409
Cow position:
Alignm length: 377
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 15

Conread position: 63-335
Cow position:
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-367
Cow position:
Alignm length: 320
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 127

Conread position: 63-380
Cow position:
Alignm length: 329
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 128

Conread position: 63-394
Cow position:
Alignm length: 345
Alignm identity: 241
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 60, 22

Conread position: 63-395
Cow position:
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 126

Conread position: 63-409
Cow position:
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 129

Conread position: 63-409
Cow position:
Alignm length: 359
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 125

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 10

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 127

Conread position: 63-409
Cow position:
Alignm length: 358
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 99

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 128

Conread position: 63-409
Cow position:
Alignm length: 360
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 127

Conread position: 63-409
Cow position:
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 130

Conread position: 63-409
Cow position:
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 125

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 129

Conread position: 63-409
Cow position:
Alignm length: 361
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 127

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 42

Conread position: 63-409
Cow position:
Alignm length: 370
Alignm identity: 257
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 61, 128

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 129

Conread position: 63-409
Cow position:
Alignm length: 361
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 126

Conread position: 63-409
Cow position:
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 128

Conread position: 63-409
Cow position:
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 129

Conread position: 63-411
Cow position:
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 91

Conread position: 64-409
Cow position:
Alignm length: 363
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 128

Conread position: 64-409
Cow position:
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 128

Conread position: 66-411
Cow position:
Alignm length: 360
Alignm identity: 235
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 129

Conread position: 67-323
Cow position:
Alignm length: 268
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 61, 125

Conread position: 73-409
Cow position:
Alignm length: 355
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 87

Conread position: 76-242
Cow position:
Alignm length: 178
Alignm identity: 134
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 50, 116

Conread position: 132-308
Cow position:
Alignm length: 183
Alignm identity: 139
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 50

Conread position: 132-409
Cow position:
Alignm length: 302
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 7, 55

Conread position: 136-392
Cow position:
Alignm length: 263
Alignm identity: 175
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 60

Conread position: 173-424
Cow position:
Alignm length: 260
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 20

Conread position: 184-409
Cow position:
Alignm length: 232
Alignm identity: 181
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 28, 118

Conread position: 185-411
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 16, 27

Conread position: 204-409
Cow position:
Alignm length: 208
Alignm identity: 154
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 142, 53

Conread position: 231-407
Cow position:
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 161, 27

Conread position: 234-409
Cow position:
Alignm length: 178
Alignm identity: 130
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 58, 106

Conread position: 246-411
Cow position:
Alignm length: 167
Alignm identity: 119
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 139, 93

Conread position: 265-409
Cow position:
Alignm length: 146
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 120, 33

Show alignments to all cow chromosomes.