Cow genome map

Conread name: Ss1.1-rthg26_l18.5

Conread position: 5-409
Cow position:
Alignm length: 433
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 198

Conread position: 6-409
Cow position:
Alignm length: 433
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 200

Conread position: 7-406
Cow position:
Alignm length: 425
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 193

Conread position: 11-213
Cow position:
Alignm length: 222
Alignm identity: 162
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 102

Conread position: 11-232
Cow position:
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 189

Conread position: 11-332
Cow position:
Alignm length: 328
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 139

Conread position: 11-407
Cow position:
Alignm length: 424
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 192

Conread position: 11-409
Cow position:
Alignm length: 442
Alignm identity: 302
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 48, 0

Conread position: 11-409
Cow position:
Alignm length: 429
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 192

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 186

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 190

Conread position: 11-409
Cow position:
Alignm length: 427
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 192

Conread position: 11-409
Cow position:
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 176

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 190

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 188

Conread position: 11-409
Cow position:
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 191

Conread position: 11-409
Cow position:
Alignm length: 425
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 192

Conread position: 11-411
Cow position:
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 192

Conread position: 11-414
Cow position:
Alignm length: 429
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 189

Conread position: 14-397
Cow position:
Alignm length: 409
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 161

Conread position: 14-409
Cow position:
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 182

Conread position: 14-410
Cow position:
Alignm length: 417
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 85

Conread position: 14-412
Cow position:
Alignm length: 424
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 186

Conread position: 15-412
Cow position:
Alignm length: 419
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 185

Conread position: 20-409
Cow position:
Alignm length: 412
Alignm identity: 269
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 33, 176

Conread position: 22-326
Cow position:
Alignm length: 309
Alignm identity: 204
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 102, 42

Conread position: 23-392
Cow position:
Alignm length: 381
Alignm identity: 270
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 100, 151

Conread position: 44-199
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 18

Conread position: 46-409
Cow position:
Alignm length: 371
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 75

Conread position: 48-409
Cow position:
Alignm length: 372
Alignm identity: 259
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 70, 14

Conread position: 63-256
Cow position:
Alignm length: 206
Alignm identity: 152
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 56, 107

Conread position: 63-270
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 56, 126

Conread position: 63-372
Cow position:
Alignm length: 326
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 129

Conread position: 63-381
Cow position:
Alignm length: 335
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-394
Cow position:
Alignm length: 349
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 130

Conread position: 63-395
Cow position:
Alignm length: 344
Alignm identity: 232
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 57, 91

Conread position: 63-409
Cow position:
Alignm length: 363
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 128

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 128

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 99

Conread position: 63-409
Cow position:
Alignm length: 360
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 38

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 134

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 129

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 129

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 127

Conread position: 63-409
Cow position:
Alignm length: 362
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 131

Conread position: 63-409
Cow position:
Alignm length: 365
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 103

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 361
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 126

Conread position: 63-409
Cow position:
Alignm length: 354
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 69

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 63-409
Cow position:
Alignm length: 364
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-409
Cow position:
Alignm length: 366
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 129

Conread position: 63-422
Cow position:
Alignm length: 377
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 129

Conread position: 64-409
Cow position:
Alignm length: 363
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 95

Conread position: 65-409
Cow position:
Alignm length: 362
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 127

Conread position: 66-409
Cow position:
Alignm length: 364
Alignm identity: 252
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 25, 125

Conread position: 74-412
Cow position:
Alignm length: 344
Alignm identity: 245
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 140, 9

Conread position: 78-383
Cow position:
Alignm length: 320
Alignm identity: 227
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 43, 20

Conread position: 84-409
Cow position:
Alignm length: 343
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 108

Conread position: 106-409
Cow position:
Alignm length: 320
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 85

Conread position: 136-383
Cow position:
Alignm length: 248
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 136-409
Cow position:
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 49

Conread position: 186-411
Cow position:
Alignm length: 227
Alignm identity: 165
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 199, 38

Conread position: 203-394
Cow position:
Alignm length: 194
Alignm identity: 153
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 20, 109

Conread position: 211-411
Cow position:
Alignm length: 203
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 144, 35

Conread position: 228-409
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 157, 120

Show alignments to all cow chromosomes.